Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund13698 Selenicereus undatus HOM05D007158 ORTHO05D007424 4.1e-113 411.8 267 100.0
Ah.10g037870 Amaranthus hybridus HOM05D007158 ORTHO05D007424 1.3e-55 220.7 267 64.8
AUR62023262 Chenopodium quinoa HOM05D007158 ORTHO05D007424 5.0e-50 202.2 190 64.2
EL10Ac2g04517 Beta vulgaris HOM05D007158 ORTHO05D007424 1.5e-46 190.7 277 61.7
Sc10g0001000 Simmondsia chinensis HOM05D007158 ORTHO05D007424 6.7e-39 165.2 219 52.1
Cfa007880 Carpinus fangiana HOM05D007158 ORTHO05D007424 1.1e-38 164.5 272 44.1
TAR629G2388 Trochodendron aralioides HOM05D007158 ORTHO05D007424 4.1e-36 156.0 276 49.6
QL02p049322 Quercus lobata HOM05D007158 ORTHO05D007424 3.4e-35 152.9 196 54.6
Thecc.04G126100 Theobroma cacao HOM05D007158 ORTHO05D007424 7.7e-35 151.8 230 54.8
GSVIVG01030945001 Vitis vinifera HOM05D007158 ORTHO05D007424 1.7e-34 150.6 196 53.6
Potri.017G121000 Populus trichocarpa HOM05D007158 ORTHO05D007424 2.9e-34 149.8 274 47.1
Duzib138G0519 Durio zibethinus HOM05D007158 ORTHO05D007424 6.5e-34 148.7 231 52.4
ECA232G0903 Erigeron canadensis HOM05D007158 ORTHO05D007424 1.1e-33 147.9 220 50.5
HanXRQChr09g0262471 Helianthus annuus HOM05D007158 ORTHO05D007424 1.4e-33 147.5 155 55.5
Gohir.D11G167600 Gossypium hirsutum HOM05D007158 ORTHO05D007424 1.9e-33 147.1 230 52.6
Gorai.007G178700 Gossypium raimondii HOM05D007158 ORTHO05D007424 1.9e-33 147.1 230 52.6
PGR004G0702 Punica granatum HOM05D007158 ORTHO05D007424 3.2e-33 146.4 268 39.2
Gohir.A11G161300 Gossypium hirsutum HOM05D007158 ORTHO05D007424 4.2e-33 146.0 230 52.2
Prupe.3G150100 Prunus persica HOM05D007158 ORTHO05D007424 2.1e-32 143.7 231 48.9
MD09G1258200 Malus domestica HOM05D007158 ORTHO05D007424 2.7e-32 143.3 231 54.1
Potri.004G094500 Populus trichocarpa HOM05D007158 ORTHO05D007424 4.7e-32 142.5 276 47.5
ClCG07G016450 Citrullus lanatus HOM05D007158 ORTHO05D007424 7.9e-32 141.7 211 43.6
Actinidia17647 Actinidia chinensis HOM05D007158 ORTHO05D007424 5.1e-31 139.0 149 55.7
Sabra17G0103400 Salix brachista HOM05D007158 ORTHO05D007424 1.1e-30 137.9 229 45.4
RcHm_v2.0_Chr1g0332591 Rosa chinensis HOM05D007158 ORTHO05D007424 2.0e-30 137.1 230 48.7
TAR374G0148 Trochodendron aralioides HOM05D007158 ORTHO05D007424 2.6e-30 136.7 290 45.2
DCAR_025891 Daucus carota HOM05D007158 ORTHO05D007424 4.4e-30 136.0 222 48.6
MELO3C010379.2 Cucumis melo HOM05D007158 ORTHO05D007424 5.7e-30 135.6 212 42.5
CsaV3_4G010370 Cucumis sativus L. HOM05D007158 ORTHO05D007424 7.4e-30 135.2 211 41.2
Aqoxy3G00164 Aquilegia oxysepala HOM05D007158 ORTHO05D007424 9.7e-30 134.8 149 55.0
TWI74G0884 Tripterygium wilfordii HOM05D007158 ORTHO05D007424 2.8e-29 133.3 158 51.9
Ciclev10012598m.g Citrus clementina HOM05D007158 ORTHO05D007424 4.8e-29 132.5 227 40.5
Duzib133G0688 Durio zibethinus HOM05D007158 ORTHO05D007424 6.3e-29 132.1 225 49.8
Solyc02g063280.4 Solanum lycopersicum HOM05D007158 ORTHO05D007424 8.2e-29 131.7 269 47.2
CiPaw.04G044500 Carya illinoinensis HOM05D007158 ORTHO05D007424 1.8e-28 130.6 230 45.7
Dinv14854 Davidia involucrata HOM05D007158 ORTHO05D007424 1.8e-28 130.6 202 49.5
Lj4A182G65 Lonicera japonica HOM05D007158 ORTHO05D007424 1.8e-28 130.6 160 48.8
COL.COLO4_03615 Corchorus olitorius HOM05D007158 ORTHO05D007424 2.4e-28 130.2 129 56.6
Migut.H00250 Erythranthe guttata HOM05D007158 ORTHO05D007424 2.4e-28 130.2 237 40.1
Eucgr.F02798 Eucalyptus grandis HOM05D007158 ORTHO05D007424 2.4e-28 130.2 230 46.5
Nn4g24036 Nelumbo nucifera HOM05D007158 ORTHO05D007424 2.4e-28 130.2 269 48.0
Zm00001eb300940 Zea mays HOM05D007158 ORTHO05D007424 2.4e-28 130.2 148 52.7
Cc07_g08430 Coffea canephora HOM05D007158 ORTHO05D007424 3.1e-28 129.8 209 51.2
Glyma.02G090200 Glycine max HOM05D007158 ORTHO05D007424 3.1e-28 129.8 216 43.1
MSTRG.2781 Avicennia marina HOM05D007158 ORTHO05D007424 7.0e-28 128.6 227 48.9
Sopen02g014350 Solanum pennellii HOM05D007158 ORTHO05D007424 1.6e-27 127.5 269 45.7
Cpa.g.sc170.15 Carica papaya HOM05D007158 ORTHO05D007424 2.6e-27 126.7 230 44.8
PGSC0003DMG400010413 Solanum tuberosum HOM05D007158 ORTHO05D007424 4.5e-27 125.9 271 44.3
Glyma.18G293000 Glycine max HOM05D007158 ORTHO05D007424 5.9e-27 125.6 216 48.6
Medtr7g082850 Medicago truncatula HOM05D007158 ORTHO05D007424 5.9e-27 125.6 208 44.7
Rhsim08G0084200 Rhododendron simsii HOM05D007158 ORTHO05D007424 5.9e-27 125.6 127 55.9
CANSAT78G1746 Cannabis sativa HOM05D007158 ORTHO05D007424 1.3e-26 124.4 123 55.3
Haze_14197 Corylus avellana HOM05D007158 ORTHO05D007424 1.3e-26 124.4 129 54.3
FvH4_7g05720 Fragaria vesca HOM05D007158 ORTHO05D007424 1.3e-26 124.4 233 45.1
FAN01G1160 Fragaria x ananassa HOM05D007158 ORTHO05D007424 1.3e-26 124.4 233 45.1
Phvul.008G009100 Phaseolus vulgaris HOM05D007158 ORTHO05D007424 2.9e-26 123.2 216 50.0
ATR0743G078 Amborella trichopoda HOM05D007158 ORTHO05D007424 5.0e-26 122.5 144 51.4
Lsat_1_v5_gn_4_156301 Lactuca sativa HOM05D007158 ORTHO05D007424 5.0e-26 122.5 218 49.5
Lalb_Chr10g0091481 Lupinus albus HOM05D007158 ORTHO05D007424 5.0e-26 122.5 203 39.9
Atru.chr1.1578 Acer truncatum HOM05D007158 ORTHO05D007424 6.5e-26 122.1 220 48.6
Dinv33973 Davidia involucrata HOM05D007158 ORTHO05D007424 1.1e-25 121.3 288 44.8
Hma1.2p1_0500F.1_g167110 Hydrangea macrophylla HOM05D007158 ORTHO05D007424 1.9e-25 120.6 233 46.4
CAN.G225.14 Capsicum annuum HOM05D007158 ORTHO05D007424 3.2e-25 119.8 270 43.0
CDE04G0479 Ceratophyllum demersum HOM05D007158 ORTHO05D007424 4.2e-25 119.4 226 38.9
Manes.01G113800 Manihot esculenta HOM05D007158 ORTHO05D007424 5.5e-25 119.0 273 42.9
Os01g0505700 Oryza sativa ssp. japonica HOM05D007158 ORTHO05D007424 5.5e-25 119.0 155 50.3
Lj1g0013464 Lotus japonicus HOM05D007158 ORTHO05D007424 7.2e-25 118.6 140 51.4
PSO339G0418 Papaver somniferum HOM05D007158 ORTHO05D007424 1.6e-24 117.5 146 47.9
Rhsim10G0076900 Rhododendron simsii HOM05D007158 ORTHO05D007424 1.6e-24 117.5 148 49.3
TPR.G28397 Trifolium pratense HOM05D007158 ORTHO05D007424 3.6e-24 116.3 141 51.8
VMungo1383G1080 Vigna mungo HOM05D007158 ORTHO05D007424 6.1e-24 115.5 216 41.2
HPP92_023114 Vanilla planifolia HOM05D007158 ORTHO05D007424 8.0e-24 115.2 219 45.2
FAN23G0239 Fragaria x ananassa HOM05D007158 ORTHO05D007424 1.0e-23 114.8 159 46.5
Nitab4.5_0000036g0590 Nicotiana tabacum HOM05D007158 ORTHO05D007424 1.0e-23 114.8 231 48.5
Nitab4.5_0002644g0050 Nicotiana tabacum HOM05D007158 ORTHO05D007424 1.0e-23 114.8 269 43.9
SGA_v2.0_scaffold202G41480 Striga asiatica HOM05D007158 ORTHO05D007424 1.8e-23 114.0 199 39.7
arahy.Tifrunner.gnm1.ann1.896A9W Arachis hypogaea HOM05D007158 ORTHO05D007424 2.3e-23 113.6 211 46.9
FAN10G2330 Fragaria x ananassa HOM05D007158 ORTHO05D007424 2.3e-23 113.6 226 37.6
arahy.Tifrunner.gnm1.ann1.5M3IQK Arachis hypogaea HOM05D007158 ORTHO05D007424 3.0e-23 113.2 212 47.2
CDE06G2846 Ceratophyllum demersum HOM05D007158 ORTHO05D007424 4.0e-23 112.8 158 45.6
Psat3g097040 Pisum sativum HOM05D007158 ORTHO05D007424 4.0e-23 112.8 214 38.8
Oeu047435.1 Olea europaea HOM05D007158 ORTHO05D007424 5.2e-23 112.5 288 42.7
Peaxi162Scf00343g00058 Petunia axillaris HOM05D007158 ORTHO05D007424 7.5e-22 108.6 214 49.5
PSO384G2845 Papaver somniferum HOM05D007158 ORTHO05D007424 2.2e-21 107.1 99 57.6
Sed0005493 Sechium edule HOM05D007158 ORTHO05D007424 1.1e-20 104.8 177 39.5
Sabra04G0063800 Salix brachista HOM05D007158 ORTHO05D007424 1.4e-20 104.4 206 42.7
FAN04G1654 Fragaria x ananassa HOM05D007158 ORTHO05D007424 7.7e-19 98.6 135 46.7
Ca_08098_v3 Cicer arietinum L. HOM05D007158 ORTHO05D007424 6.5e-18 95.5 198 36.4
Sabra17G0100100 Salix brachista HOM05D007158 ORTHO05D007424 8.5e-18 95.1 208 40.9
FAN03G1259 Fragaria x ananassa HOM05D007158 ORTHO05D007424 2.5e-17 93.6 226 35.4
vmacro18064 Vaccinium macrocarpon HOM05D007158 ORTHO05D007424 2.7e-16 90.1 102 51.0
SHI25695 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-16 89.4 98 46.9
Rhsim10G0074300 Rhododendron simsii HOM05D007158 ORTHO05D007424 6.1e-16 89.0 150 44.7
SMO119G0024 Selaginella moellendorffii HOM05D007158 ORTHO05D007424 2.3e-15 87.0 84 52.4
Mapoly0099s0058 Marchantia polymorpha HOM05D007158 ORTHO05D007424 1.5e-14 84.3 158 40.5
THA.LOC104809979 Tarenaya hassleriana HOM05D007158 ORTHO05D007424 9.8e-14 81.6 233 32.2
Pp3c14_9040 Physcomitrium patens HOM05D007158 ORTHO05D007424 2.2e-13 80.5 86 51.2
AagrBONN_evm.TU.Sc2ySwM_117.711 Anthoceros agrestis HOM05D007158 ORTHO05D007424 2.8e-13 80.1 166 39.2
CBR_g32195 Chara braunii HOM05D007158 ORTHO05D007424 1.2e-11 74.7 78 50.0
Oeu061824.1 Olea europaea HOM05D007158 ORTHO05D007424 5.9e-11 72.4 181 36.5
Thhalv10023615m.g Eutrema salsugineum HOM05D011338 ORTHO05D007424 9.4e-09 65.1 69 47.8
Carub.0002s0469 Capsella rubella HOM05D007158 ORTHO05D007424 1.6e-08 64.3 47 53.2
Sp2g04080 Schrenkiella parvula HOM05D011338 ORTHO05D007424 2.1e-08 63.9 47 53.2
A01p29410 Brassica napus HOM05D011338 ORTHO05D007424 2.7e-08 63.5 73 38.4
BraA01t03075Z Brassica rapa HOM05D011338 ORTHO05D007424 3.6e-08 63.2 70 41.4
CARHR052290 Cardamine hirsuta HOM05D007158 ORTHO05D007424 4.7e-08 62.8 66 47.0
BolC1t03688H Brassica oleracea HOM05D011338 ORTHO05D007424 8.0e-08 62.0 73 41.1
AT1G60640 Arabidopsis thaliana HOM05D007158 ORTHO05D007424 1.0e-07 61.6 69 44.9
AL2G15950 Arabidopsis lyrata HOM05D011338 ORTHO05D007424 1.4e-07 61.2 56 48.2
BcaC09g49385 Brassica carinata HOM05D011338 ORTHO05D007424 1.4e-07 61.2 69 43.5
C01p37190 Brassica napus HOM05D011338 ORTHO05D007424 1.4e-07 61.2 69 43.5
Sabra02G0153300 Salix brachista HOM05D005631 ORTHO05D006765 2.3e-07 60.5 48 70.8
Sabra16G0085100 Salix brachista HOM05D005274 ORTHO05D007424 2.3e-07 60.5 48 70.8
Sabra10G0082800 Salix brachista HOM05D005274 ORTHO05D006485 6.8e-07 58.9 57 59.6
Sabra02G0148900 Salix brachista HOM05D005274 ORTHO05D006485 8.8e-07 58.5 55 60.0
Sabra16G0093500 Salix brachista HOM05D005274 ORTHO05D007424 1.2e-06 58.2 60 58.3
Sabra07G0113400 Salix brachista HOM05D005274 ORTHO05D006485 2.6e-06 57.0 48 64.6
BcaC06g31815 Brassica carinata HOM05D011338 ORTHO05D007424 7.5e-06 55.5 43 46.5


User provided reference genes

Program Settings