Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund13396 Selenicereus undatus HOM05D006312 ORTHO05D007843 1.7e-114 416.0 207 100.0
EL10Ac2g02752 Beta vulgaris HOM05D006312 ORTHO05D007843 9.7e-62 240.7 189 67.7
COL.COLO4_27421 Corchorus olitorius HOM05D006312 ORTHO05D007843 3.7e-61 238.8 188 64.9
Sc10g0004590 Simmondsia chinensis HOM05D006312 ORTHO05D007843 6.3e-61 238.0 188 67.6
Prupe.7G188400 Prunus persica HOM05D006312 ORTHO05D007843 2.7e-59 232.6 189 64.6
Potri.001G455900 Populus trichocarpa HOM05D006312 ORTHO05D007843 5.9e-59 231.5 184 65.2
Thecc.05G202100 Theobroma cacao HOM05D006312 ORTHO05D007843 7.7e-59 231.1 138 81.9
Sabra16G0308500 Salix brachista HOM05D006312 ORTHO05D007843 1.1e-57 227.3 184 64.1
RcHm_v2.0_Chr2g0096661 Rosa chinensis HOM05D006312 ORTHO05D007843 4.2e-57 225.3 192 62.0
Atru.chr2.1887 Acer truncatum HOM05D006312 ORTHO05D007843 9.4e-57 224.2 172 67.4
TAR376G0343 Trochodendron aralioides HOM05D006312 ORTHO05D007843 2.1e-56 223.0 156 74.4
CANSAT21G2119 Cannabis sativa HOM05D006312 ORTHO05D007843 2.7e-56 222.6 189 60.8
Cpa.g.sc178.37 Carica papaya HOM05D006312 ORTHO05D007843 3.6e-56 222.2 133 81.2
Ciclev10012864m.g Citrus clementina HOM05D006312 ORTHO05D007843 4.0e-55 218.8 162 69.1
MBI04_g11525_MAGBIO Magnolia biondii HOM05D006312 ORTHO05D007843 5.2e-55 218.4 153 73.9
Sed0011609 Sechium edule HOM05D006312 ORTHO05D007843 6.8e-55 218.0 136 76.5
Eucgr.J02573 Eucalyptus grandis HOM05D006312 ORTHO05D007843 1.2e-54 217.2 137 76.6
PGR102G2008 Punica granatum HOM05D006312 ORTHO05D007843 1.2e-54 217.2 130 81.5
Aqoxy6G03048 Aquilegia oxysepala HOM05D006312 ORTHO05D007843 1.5e-54 216.9 130 80.0
Gorai.013G007100 Gossypium raimondii HOM05D006312 ORTHO05D007843 1.5e-54 216.9 126 83.3
MD02G1107600 Malus domestica HOM05D006312 ORTHO05D007843 2.0e-54 216.5 131 76.3
Gohir.A13G006700 Gossypium hirsutum HOM05D006312 ORTHO05D007843 3.4e-54 215.7 126 82.5
Cfa007119 Carpinus fangiana HOM05D006312 ORTHO05D007843 4.4e-54 215.3 187 59.4
Gohir.D13G006900 Gossypium hirsutum HOM05D006312 ORTHO05D007843 4.4e-54 215.3 126 82.5
VMungo1383G0261 Vigna mungo HOM05D006312 ORTHO05D007843 4.4e-54 215.3 142 73.2
AUR62032612 Chenopodium quinoa HOM05D006312 ORTHO05D007843 9.8e-54 214.2 194 60.8
ATR0605G230 Amborella trichopoda HOM05D006312 ORTHO05D007843 1.3e-53 213.8 126 79.4
AUR62031725 Chenopodium quinoa HOM05D006312 ORTHO05D007843 1.3e-53 213.8 187 62.0
CSS0005301 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 2.2e-53 213.0 136 76.5
Glyma.03G158200 Glycine max HOM05D006312 ORTHO05D007843 2.8e-53 212.6 128 81.2
CSS0026635 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 3.7e-53 212.2 136 76.5
MELO3C007014.2 Cucumis melo HOM05D006312 ORTHO05D007843 3.7e-53 212.2 130 76.2
TWI34G0319 Tripterygium wilfordii HOM05D006312 ORTHO05D007843 3.7e-53 212.2 191 59.7
Ca_08638_v3 Cicer arietinum L. HOM05D006312 ORTHO05D007843 4.8e-53 211.8 136 76.5
CsaV3_6G052950 Cucumis sativus L. HOM05D006312 ORTHO05D007843 4.8e-53 211.8 130 76.2
Manes.02G117611 Manihot esculenta HOM05D006312 ORTHO05D007843 1.4e-52 210.3 129 79.1
Phvul.001G155800 Phaseolus vulgaris HOM05D006312 ORTHO05D007843 2.4e-52 209.5 140 72.9
FvH4_1g09790 Fragaria vesca HOM05D006312 ORTHO05D007843 5.4e-52 208.4 201 56.7
FAN23G0139 Fragaria x ananassa HOM05D006312 ORTHO05D007843 7.0e-52 208.0 194 58.8
FAN26G2993 Fragaria x ananassa HOM05D006312 ORTHO05D007843 7.0e-52 208.0 194 58.8
TPR.G19116 Trifolium pratense HOM05D006312 ORTHO05D007843 7.0e-52 208.0 130 75.4
arahy.Tifrunner.gnm1.ann1.YWP2KZ Arachis hypogaea HOM05D006312 ORTHO05D007843 9.1e-52 207.6 184 58.7
FAN19G0451 Fragaria x ananassa HOM05D006312 ORTHO05D007843 9.1e-52 207.6 195 56.9
FAN23G3058 Fragaria x ananassa HOM05D006312 ORTHO05D007843 9.1e-52 207.6 188 58.5
Glyma.19G160500 Glycine max HOM05D006312 ORTHO05D007843 1.2e-51 207.2 185 62.2
ClCG01G025710 Citrullus lanatus HOM05D006312 ORTHO05D007843 1.6e-51 206.8 141 70.9
Psat3g060840 Pisum sativum HOM05D006312 ORTHO05D007843 3.5e-51 205.7 134 73.9
Actinidia28758 Actinidia chinensis HOM05D006312 ORTHO05D007843 4.5e-51 205.3 130 77.7
FAN28G0218 Fragaria x ananassa HOM05D006312 ORTHO05D007843 4.5e-51 205.3 131 76.3
Rhsim08G0025300 Rhododendron simsii HOM05D006312 ORTHO05D007843 5.9e-51 204.9 140 74.3
arahy.Tifrunner.gnm1.ann1.Y34PHS Arachis hypogaea HOM05D006312 ORTHO05D007843 7.7e-51 204.5 161 63.4
A01p23400 Brassica napus HOM05D006312 ORTHO05D007843 1.5e-49 200.3 138 71.7
BraA01t02247Z Brassica rapa HOM05D006312 ORTHO05D007843 1.5e-49 200.3 138 71.7
Hma1.2p1_0034F.1_g021580 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 1.9e-49 199.9 130 76.2
Actinidia35692 Actinidia chinensis HOM05D006312 ORTHO05D007843 2.5e-49 199.5 148 66.9
BcaNung00380 Brassica carinata HOM05D006312 ORTHO05D007843 2.5e-49 199.5 138 71.0
DCAR_016700 Daucus carota HOM05D006312 ORTHO05D007843 4.2e-49 198.7 168 60.7
C01p29030 Brassica napus HOM05D006312 ORTHO05D007843 5.5e-49 198.4 138 71.0
C08p26760 Brassica napus HOM05D006312 ORTHO05D007843 5.5e-49 198.4 135 74.1
BolC1t02835H Brassica oleracea HOM05D006312 ORTHO05D007843 5.5e-49 198.4 138 71.0
BolC8t50289H Brassica oleracea HOM05D006312 ORTHO05D007843 5.5e-49 198.4 135 74.1
AL5G31950 Arabidopsis lyrata HOM05D006312 ORTHO05D007843 1.2e-48 197.2 127 75.6
Carub.0005s1789 Capsella rubella HOM05D006312 ORTHO05D007843 1.2e-48 197.2 128 75.0
THA.LOC104815359 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 1.6e-48 196.8 147 70.1
Ah.12g058670 Amaranthus hybridus HOM05D006312 ORTHO05D007843 2.8e-48 196.1 164 62.8
CARHR161090 Cardamine hirsuta HOM05D006312 ORTHO05D007843 2.8e-48 196.1 127 74.8
BcaB01g00508 Brassica carinata HOM05D006312 ORTHO05D007843 4.7e-48 195.3 130 75.4
Thhalv10010756m.g Eutrema salsugineum HOM05D006312 ORTHO05D007843 4.7e-48 195.3 151 64.9
AT3G51510 Arabidopsis thaliana HOM05D006312 ORTHO05D007843 8.0e-48 194.5 150 65.3
Lsat_1_v5_gn_3_68340 Lactuca sativa HOM05D006312 ORTHO05D007843 8.0e-48 194.5 120 75.0
BraA09t39926Z Brassica rapa HOM05D006312 ORTHO05D007843 1.0e-47 194.1 129 75.2
PSO541G2566 Papaver somniferum HOM05D006312 ORTHO05D007843 1.0e-47 194.1 133 72.9
Cc07_g12330 Coffea canephora HOM05D006312 ORTHO05D007843 1.4e-47 193.7 134 72.4
Sp5g10730 Schrenkiella parvula HOM05D006312 ORTHO05D007843 1.4e-47 193.7 138 69.6
Potri.011G146200 Populus trichocarpa HOM05D006312 ORTHO05D007843 2.3e-47 193.0 110 80.0
A09p44660 Brassica napus HOM05D006312 ORTHO05D007843 4.0e-47 192.2 130 74.6
CAN.G883.25 Capsicum annuum HOM05D006312 ORTHO05D007843 4.0e-47 192.2 148 69.6
PSO675G2564 Papaver somniferum HOM05D006312 ORTHO05D007843 5.2e-47 191.8 133 72.9
Medtr7g095930 Medicago truncatula HOM05D006312 ORTHO05D007843 8.9e-47 191.0 142 69.7
QL06p053470 Quercus lobata HOM05D006312 ORTHO05D007843 1.2e-46 190.7 138 69.6
SEGI_12518 Sequoiadendron giganteum HOM05D006312 ORTHO05D007843 1.2e-46 190.7 132 70.5
THA.LOC104808852 Tarenaya hassleriana HOM05D006312 ORTHO05D007843 1.2e-46 190.7 155 63.2
Oeu024786.1 Olea europaea HOM05D006312 ORTHO05D007843 2.0e-46 189.9 139 70.5
Solyc02g068270.4 Solanum lycopersicum HOM05D006312 ORTHO05D007843 2.6e-46 189.5 153 65.4
MSTRG.3652 Avicennia marina HOM05D006312 ORTHO05D007843 3.4e-46 189.1 140 75.0
Sopen02g017370 Solanum pennellii HOM05D006312 ORTHO05D007843 3.4e-46 189.1 153 65.4
FAN23G0893 Fragaria x ananassa HOM05D006312 ORTHO05D007843 1.3e-45 187.2 106 83.0
HPP92_005603 Vanilla planifolia HOM05D006312 ORTHO05D007843 1.3e-45 187.2 137 67.2
SGA_v2.0_scaffold132G34566 Striga asiatica HOM05D006312 ORTHO05D007843 1.7e-45 186.8 116 81.0
Lj1g0018795 Lotus japonicus HOM05D006312 ORTHO05D007843 2.2e-45 186.4 143 65.7
Dinv24398 Davidia involucrata HOM05D006312 ORTHO05D007843 4.9e-45 185.3 125 74.4
Nitab4.5_0003878g0040 Nicotiana tabacum HOM05D006312 ORTHO05D007843 4.9e-45 185.3 161 61.5
Dinv28290 Davidia involucrata HOM05D006312 ORTHO05D007843 8.3e-45 184.5 123 74.8
ECA246G0189 Erigeron canadensis HOM05D006312 ORTHO05D007843 8.3e-45 184.5 120 73.3
HanXRQChr16g0532211 Helianthus annuus HOM05D006312 ORTHO05D007843 1.1e-44 184.1 121 71.9
Nitab4.5_0003141g0020 Nicotiana tabacum HOM05D006312 ORTHO05D007843 3.1e-44 182.6 145 65.5
Peaxi162Scf00981g00214 Petunia axillaris HOM05D006312 ORTHO05D007843 5.4e-44 181.8 126 69.0
Migut.K01209 Erythranthe guttata HOM05D006312 ORTHO05D007843 1.2e-43 180.6 137 68.6
SalBow5G1176 Salvia bowleyana HOM05D006312 ORTHO05D007843 2.0e-43 179.9 154 58.4
MD15G1226900 Malus domestica HOM05D006312 ORTHO05D007843 7.8e-43 177.9 163 55.2
CDE07G0026 Ceratophyllum demersum HOM05D006312 ORTHO05D007843 2.3e-42 176.4 156 60.3
CiPaw.08G182900 Carya illinoinensis HOM05D006312 ORTHO05D007843 6.6e-42 174.9 114 75.4
Lalb_Chr01g0019941 Lupinus albus HOM05D006312 ORTHO05D007843 8.6e-42 174.5 130 70.0
Os05g0490900 Oryza sativa ssp. japonica HOM05D006312 ORTHO05D007843 2.5e-41 172.9 129 70.5
Nn6g34643 Nelumbo nucifera HOM05D006312 ORTHO05D007843 5.6e-41 171.8 165 55.2
Zm00001eb291320 Zea mays HOM05D006312 ORTHO05D007843 7.3e-41 171.4 126 68.3
Haze_03648 Corylus avellana HOM05D006312 ORTHO05D007843 8.0e-40 167.9 146 58.9
AUR62037337 Chenopodium quinoa HOM05D006312 ORTHO05D007843 8.3e-37 157.9 97 79.4
GSVIVG01026613001 Vitis vinifera HOM05D006312 ORTHO05D007843 1.9e-36 156.8 88 85.2
vmacro18480 Vaccinium macrocarpon HOM05D006312 ORTHO05D007843 2.4e-36 156.4 129 62.8
Lj2A507T48 Lonicera japonica HOM05D006312 ORTHO05D007843 1.2e-35 154.1 137 57.7
Hma1.2p1_0034F.1_g021590 Hydrangea macrophylla HOM05D006312 ORTHO05D007843 1.0e-34 151.0 103 73.8
unitig_748.g7258 Utricularia gibba HOM05D006312 ORTHO05D007843 1.7e-34 150.2 121 64.5
SMO356G0733 Selaginella moellendorffii HOM05D006312 ORTHO05D007843 1.4e-31 140.6 110 61.8
CBR_g16852 Chara braunii HOM05D006312 ORTHO05D007843 1.8e-31 140.2 111 62.2
AagrBONN_evm.TU.Sc2ySwM_117.3170 Anthoceros agrestis HOM05D006312 ORTHO05D007843 4.0e-31 139.0 161 44.1
Mapoly0072s0008 Marchantia polymorpha HOM05D006312 ORTHO05D007843 9.2e-28 127.9 123 48.8
Pp3c12_25230 Physcomitrium patens HOM05D006312 ORTHO05D007843 3.0e-26 122.9 124 49.2
Aa31LG10G3290 Aethionema arabicum HOM05D001371 ORTHO05D001319 7.8e-19 98.2 84 59.5
Cre16.g679300 Chlamydomonas reinhardtii HOM05D006312 ORTHO05D007843 1.9e-17 93.6 118 42.4
MCO03G312 Micromonas commoda HOM05D006312 ORTHO05D007843 1.1e-15 87.8 98 45.9
CSS0018042 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 2.6e-14 83.2 50 76.0
CSS0013138 Camellia sinensis var. sinensis HOM05D006312 ORTHO05D007843 6.0e-11 72.0 61 60.7
PRCOL_00002065 Prasinoderma coloniale HOM05D006312 ORTHO05D007843 2.0e-06 57.0 81 42.0
QL11p010710 Quercus lobata HOM05D006312 ORTHO05D007843 9.9e-06 54.7 55 50.9


User provided reference genes

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