Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund13292 Selenicereus undatus HOM05D004965 ORTHO05D004401 7.8e-52 206.8 104 100.0
AUR62030559 Chenopodium quinoa HOM05D068275 ORTHO05D004401 2.0e-15 85.9 114 46.5
Dinv24933 Davidia involucrata HOM05D004965 ORTHO05D004401 2.9e-14 82.0 99 53.5
Sc10g0004060 Simmondsia chinensis HOM05D004965 ORTHO05D004401 1.1e-13 80.1 111 40.5
TAR374G1442 Trochodendron aralioides HOM05D004965 ORTHO05D004401 3.6e-12 75.1 99 46.5
CiPaw.04G021200 Carya illinoinensis HOM05D004965 ORTHO05D004401 6.1e-12 74.3 95 45.3
Thecc.02G237300 Theobroma cacao HOM05D004965 ORTHO05D004401 3.0e-11 72.0 111 44.1
TAR629G2889 Trochodendron aralioides HOM05D004965 ORTHO05D004401 3.0e-11 72.0 99 46.5
Haze_14606 Corylus avellana HOM05D004965 ORTHO05D004401 3.9e-11 71.6 91 47.3
CiPaw.03G032200 Carya illinoinensis HOM05D004965 ORTHO05D004401 1.5e-10 69.7 95 46.3
Ciclev10033175m.g Citrus clementina HOM05D004965 ORTHO05D004401 1.5e-10 69.7 96 42.7
CSS0043755 Camellia sinensis var. sinensis HOM05D004965 ORTHO05D004401 2.5e-10 68.9 91 47.3
MD09G1042500 Malus domestica HOM05D004965 ORTHO05D004401 2.5e-10 68.9 97 41.2
Cpa.g.sc14.63 Carica papaya HOM05D004965 ORTHO05D004401 7.4e-10 67.4 96 39.6
Prupe.1G263100 Prunus persica HOM05D004965 ORTHO05D004401 1.7e-09 66.2 105 42.9
Duzib251G0216 Durio zibethinus HOM05D004965 ORTHO05D004401 2.2e-09 65.9 116 40.5
Prupe.3G275200 Prunus persica HOM05D004965 ORTHO05D004401 2.2e-09 65.9 90 40.0
Manes.15G177900 Manihot esculenta HOM05D004965 ORTHO05D004401 3.7e-09 65.1 95 38.9
AUR62018327 Chenopodium quinoa HOM05D068275 ORTHO05D004401 4.8e-09 64.7 110 40.0
Dinv31145 Davidia involucrata HOM05D004965 ORTHO05D004401 4.8e-09 64.7 100 47.0
MBI01_g13075_MAGBIO Magnolia biondii HOM05D004965 ORTHO05D004401 4.8e-09 64.7 97 40.2
Potri.017G074600 Populus trichocarpa HOM05D004965 ORTHO05D004401 6.3e-09 64.3 95 35.8
QL02p079418 Quercus lobata HOM05D004965 ORTHO05D004401 6.3e-09 64.3 92 42.4
Nn3g17067 Nelumbo nucifera HOM05D004965 ORTHO05D004401 8.2e-09 63.9 99 39.4
TAR369G0013 Trochodendron aralioides HOM05D004965 ORTHO05D004401 1.1e-08 63.5 95 37.9
Actinidia06052 Actinidia chinensis HOM05D004965 ORTHO05D004401 1.4e-08 63.2 95 42.1
Cc11_g13890 Coffea canephora HOM05D004965 ORTHO05D004401 3.1e-08 62.0 95 40.0
Nn4g22977 Nelumbo nucifera HOM05D004965 ORTHO05D004401 3.1e-08 62.0 93 39.8
MBI04_g09739_MAGBIO Magnolia biondii HOM05D004965 ORTHO05D004401 4.1e-08 61.6 58 53.4
Glyma.19G017400 Glycine max HOM05D004965 ORTHO05D004401 5.3e-08 61.2 90 38.9
ClCG09G018520 Citrullus lanatus HOM05D006434 ORTHO05D008069 6.9e-08 60.8 49 61.2
Psat1g077560 Pisum sativum HOM05D004965 ORTHO05D004401 6.9e-08 60.8 94 37.2
Potri.010G039800 Populus trichocarpa HOM05D004965 ORTHO05D004401 6.9e-08 60.8 99 39.4
Atru.chr11.1915 Acer truncatum HOM05D004965 ORTHO05D004401 9.1e-08 60.5 58 53.4
CsaV3_5G037710 Cucumis sativus L. HOM05D004965 ORTHO05D004401 9.1e-08 60.5 49 61.2
Sp5g25080 Schrenkiella parvula HOM05D010176 ORTHO05D012455 9.1e-08 60.5 93 39.8
Duzib248G0243 Durio zibethinus HOM05D004965 ORTHO05D004401 1.2e-07 60.1 119 39.5
Migut.H00875 Erythranthe guttata HOM05D004965 ORTHO05D004401 1.2e-07 60.1 98 36.7
TAR622G1192 Trochodendron aralioides HOM05D004965 ORTHO05D004401 1.2e-07 60.1 93 41.9
CANSAT64G1053 Cannabis sativa HOM05D004965 ORTHO05D004401 1.5e-07 59.7 111 38.7
CiPaw.06G078100 Carya illinoinensis HOM05D004965 ORTHO05D004401 1.5e-07 59.7 107 38.3
Dinv33690 Davidia involucrata HOM05D004965 ORTHO05D004401 1.5e-07 59.7 98 40.8
Lj2g0009068 Lotus japonicus HOM05D004965 ORTHO05D004401 1.5e-07 59.7 94 37.2
Manes.05G094200 Manihot esculenta HOM05D004965 ORTHO05D004401 1.5e-07 59.7 92 40.2
BcaC08g45847 Brassica carinata HOM05D010176 ORTHO05D012455 2.0e-07 59.3 87 40.2
Glyma.13G067000 Glycine max HOM05D004965 ORTHO05D004401 2.0e-07 59.3 94 37.2
Phvul.004G023800 Phaseolus vulgaris HOM05D004965 ORTHO05D004401 2.0e-07 59.3 103 35.0
Sed0027722 Sechium edule HOM05D004965 ORTHO05D004401 2.0e-07 59.3 97 41.2
Glyma.02G025700 Glycine max HOM05D004965 ORTHO05D004401 2.6e-07 58.9 106 38.7
MD16G1082900 Malus domestica HOM05D004965 ORTHO05D004401 2.6e-07 58.9 96 39.6
Medtr6g009390 Medicago truncatula HOM05D004965 ORTHO05D004401 2.6e-07 58.9 50 52.0
CSS0014777 Camellia sinensis var. sinensis HOM05D004965 ORTHO05D004401 3.4e-07 58.5 86 46.5
TPR.G32595 Trifolium pratense HOM05D004965 ORTHO05D004401 3.4e-07 58.5 50 52.0
Actinidia12285 Actinidia chinensis HOM05D004965 ORTHO05D004401 4.5e-07 58.2 100 41.0
Aqoxy3G00848 Aquilegia oxysepala HOM05D004965 ORTHO05D004401 4.5e-07 58.2 96 40.6
CiPaw.05G143500 Carya illinoinensis HOM05D004965 ORTHO05D004401 4.5e-07 58.2 110 39.1
DCAR_025362 Daucus carota HOM05D004965 ORTHO05D004401 4.5e-07 58.2 106 40.6
TWI56G0241 Tripterygium wilfordii HOM05D004965 ORTHO05D004401 4.5e-07 58.2 108 37.0
DCAR_007120 Daucus carota HOM05D004965 ORTHO05D004401 5.9e-07 57.8 94 42.6
DCAR_026576 Daucus carota HOM05D004965 ORTHO05D004401 5.9e-07 57.8 93 36.6
Potri.008G191500 Populus trichocarpa HOM05D004965 ORTHO05D004401 5.9e-07 57.8 98 40.8
GSVIVG01020127001 Vitis vinifera HOM05D004965 ORTHO05D004401 5.9e-07 57.8 100 39.0
EL10Ac6g13083 Beta vulgaris HOM05D004965 ORTHO05D004401 7.7e-07 57.4 99 40.4
BcaB03g15521 Brassica carinata HOM05D010176 ORTHO05D012455 7.7e-07 57.4 92 35.9
DCAR_006716 Daucus carota HOM05D004965 ORTHO05D004401 7.7e-07 57.4 56 50.0
FvH4_6g49680 Fragaria vesca HOM05D004965 ORTHO05D004401 7.7e-07 57.4 104 38.5
FAN14G2761 Fragaria x ananassa HOM05D004965 ORTHO05D004401 7.7e-07 57.4 104 38.5
Lalb_Chr05g0217401 Lupinus albus HOM05D004965 ORTHO05D004401 7.7e-07 57.4 95 41.1
vmacro16304 Vaccinium macrocarpon HOM05D004965 ORTHO05D004401 7.7e-07 57.4 94 41.5
FAN09G1906 Fragaria x ananassa HOM05D004965 ORTHO05D004401 1.0e-06 57.0 103 40.8
Gohir.D07G223500 Gossypium hirsutum HOM05D004965 ORTHO05D004401 1.0e-06 57.0 99 37.4
Lalb_Chr06g0176581 Lupinus albus HOM05D004965 ORTHO05D004401 1.0e-06 57.0 99 39.4
Zm00001eb302690 Zea mays HOM05D025658 ORTHO05D030375 1.0e-06 57.0 72 45.8
Aqoxy3G03187 Aquilegia oxysepala HOM05D004965 ORTHO05D004401 1.3e-06 56.6 107 35.5
FAN02G2636 Fragaria x ananassa HOM05D004965 ORTHO05D004401 1.3e-06 56.6 104 38.5
Gorai.001G257800 Gossypium raimondii HOM05D004965 ORTHO05D004401 1.3e-06 56.6 99 37.4
Lj2g0004313 Lotus japonicus HOM05D004965 ORTHO05D004401 1.3e-06 56.6 106 36.8
Atru.chr8.2466 Acer truncatum HOM05D004965 ORTHO05D004401 1.7e-06 56.2 104 37.5
CSS0011493 Camellia sinensis var. sinensis HOM05D004965 ORTHO05D004401 1.7e-06 56.2 81 44.4
Cfa007493 Carpinus fangiana HOM05D004965 ORTHO05D004401 1.7e-06 56.2 94 40.4
Lalb_Chr16g0382641 Lupinus albus HOM05D004965 ORTHO05D004401 1.7e-06 56.2 94 39.4
RcHm_v2.0_Chr2g0169701 Rosa chinensis HOM05D004965 ORTHO05D004401 1.7e-06 56.2 101 41.6
TWI36G1294 Tripterygium wilfordii HOM05D004965 ORTHO05D004401 1.7e-06 56.2 99 38.4
CANSAT01G1612 Cannabis sativa HOM05D004965 ORTHO05D004401 2.2e-06 55.8 71 43.7
FAN05G5108 Fragaria x ananassa HOM05D004965 ORTHO05D004401 2.2e-06 55.8 104 38.5
MD13G1083500 Malus domestica HOM05D004965 ORTHO05D004401 2.2e-06 55.8 99 40.4
AT1G69970 Arabidopsis thaliana HOM05D010176 ORTHO05D012455 2.9e-06 55.5 95 37.9
Glyma.01G038900 Glycine max HOM05D004965 ORTHO05D004401 2.9e-06 55.5 95 42.1
Eucgr.B02578 Eucalyptus grandis HOM05D004965 ORTHO05D004401 3.8e-06 55.1 73 49.3
Gohir.A01G142000 Gossypium hirsutum HOM05D004965 ORTHO05D004401 3.8e-06 55.1 109 33.9
MD17G1044000 Malus domestica HOM05D004965 ORTHO05D004401 3.8e-06 55.1 80 37.5
Psat2g116360 Pisum sativum HOM05D004965 ORTHO05D004401 3.8e-06 55.1 88 39.8
AL2G29210 Arabidopsis lyrata HOM05D010176 ORTHO05D012455 5.0e-06 54.7 95 40.0
Thecc.04G069500 Theobroma cacao HOM05D004965 ORTHO05D004401 5.0e-06 54.7 95 31.6
RcHm_v2.0_Chr4g0445011 Rosa chinensis HOM05D004965 ORTHO05D004401 6.5e-06 54.3 115 37.4
BcaC08g46447 Brassica carinata HOM05D010176 ORTHO05D012455 8.5e-06 53.9 94 37.2
Gohir.A07G216700 Gossypium hirsutum HOM05D004965 ORTHO05D004401 8.5e-06 53.9 99 36.4
Gohir.D01G133500 Gossypium hirsutum HOM05D004965 ORTHO05D004401 8.5e-06 53.9 50 56.0
Gorai.002G165000 Gossypium raimondii HOM05D004965 ORTHO05D004401 8.5e-06 53.9 50 56.0
Sabra17G0067000 Salix brachista HOM05D004965 ORTHO05D004401 8.5e-06 53.9 81 37.0


User provided reference genes

Program Settings