Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund13252 Selenicereus undatus HOM05D002474 ORTHO05D006727 0.0e+00 1159.8 647 100.0
Sc11g0006920 Simmondsia chinensis HOM05D002474 ORTHO05D006727 3.8e-173 612.5 536 60.4
HanXRQChr17g0547501 Helianthus annuus HOM05D002474 ORTHO05D006727 6.1e-171 605.1 520 60.8
QL02p080225 Quercus lobata HOM05D002474 ORTHO05D006727 1.4e-170 604.0 524 63.2
ECA246G0556 Erigeron canadensis HOM05D002474 ORTHO05D006727 4.9e-168 595.5 496 61.9
GSVIVG01032597001 Vitis vinifera HOM05D002474 ORTHO05D006727 2.0e-166 590.1 477 63.5
Atru.chr8.2476 Acer truncatum HOM05D002474 ORTHO05D006727 3.5e-166 589.3 477 63.7
Nn4g23008 Nelumbo nucifera HOM05D002474 ORTHO05D006727 4.6e-166 589.0 525 60.2
CSS0021046 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 7.8e-166 588.2 479 64.7
Thecc.09G254500 Theobroma cacao HOM05D002474 ORTHO05D006727 7.8e-166 588.2 530 59.2
Potri.004G130000 Populus trichocarpa HOM05D002474 ORTHO05D006727 1.9e-164 583.6 511 63.2
Lsat_1_v5_gn_3_102300 Lactuca sativa HOM05D002474 ORTHO05D006727 3.3e-164 582.8 516 60.1
Gorai.013G255100 Gossypium raimondii HOM05D002474 ORTHO05D006727 5.6e-164 582.0 523 60.4
RcHm_v2.0_Chr2g0169251 Rosa chinensis HOM05D002474 ORTHO05D006727 5.6e-164 582.0 507 59.0
FvH4_6g49390 Fragaria vesca HOM05D002474 ORTHO05D006727 1.2e-163 580.9 492 60.6
Hma1.2p1_0449F.1_g154950 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 2.8e-163 579.7 490 61.8
Gohir.A13G220300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 3.1e-162 576.2 523 60.0
Phvul.004G025500 Phaseolus vulgaris HOM05D002474 ORTHO05D006727 3.1e-162 576.2 507 59.8
Psat1g077640 Pisum sativum HOM05D002474 ORTHO05D006727 5.2e-162 575.5 541 56.7
Solyc02g067480.3 Solanum lycopersicum HOM05D002474 ORTHO05D006727 6.8e-162 575.1 494 60.7
Ca_04259_v3 Cicer arietinum L. HOM05D002474 ORTHO05D006727 5.8e-161 572.0 514 60.1
Sopen02g016630 Solanum pennellii HOM05D002474 ORTHO05D006727 5.8e-161 572.0 494 60.3
Eucgr.J02138 Eucalyptus grandis HOM05D002474 ORTHO05D006727 7.5e-161 571.6 519 58.2
Lalb_Chr06g0175531 Lupinus albus HOM05D002474 ORTHO05D006727 9.8e-161 571.2 503 60.6
TPR.G4252 Trifolium pratense HOM05D002474 ORTHO05D006727 9.8e-161 571.2 524 57.4
EL10Ac2g02929 Beta vulgaris HOM05D002474 ORTHO05D006727 1.3e-160 570.9 543 59.1
PGSC0003DMG400006940 Solanum tuberosum HOM05D002474 ORTHO05D006727 1.7e-160 570.5 491 60.5
PSO478G4089 Papaver somniferum HOM05D002474 ORTHO05D006727 3.7e-160 569.3 478 62.3
MELO3C021965.2 Cucumis melo HOM05D002474 ORTHO05D006727 6.4e-160 568.5 508 59.3
CsaV3_5G037800 Cucumis sativus L. HOM05D002474 ORTHO05D006727 6.4e-160 568.5 508 59.6
Ciclev10011620m.g Citrus clementina HOM05D002474 ORTHO05D006727 3.2e-159 566.2 478 62.8
Ah.12g065360 Amaranthus hybridus HOM05D002474 ORTHO05D006727 9.2e-159 564.7 515 59.8
Lj2g0026556 Lotus japonicus HOM05D002474 ORTHO05D006727 1.2e-158 564.3 516 59.9
Medtr6g011270 Medicago truncatula HOM05D002474 ORTHO05D006727 1.6e-158 563.9 521 57.2
Nitab4.5_0006062g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 2.1e-158 563.5 494 59.9
CAN.G1128.5 Capsicum annuum HOM05D002474 ORTHO05D006727 2.7e-158 563.1 491 59.9
Aqoxy3G00804 Aquilegia oxysepala HOM05D002474 ORTHO05D006727 3.5e-158 562.8 479 61.8
Oeu033341.3 Olea europaea HOM05D002474 ORTHO05D006727 1.7e-157 560.5 555 56.4
Gohir.D13G224300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 3.0e-157 559.7 523 59.3
arahy.Tifrunner.gnm1.ann1.B2F8E8 Arachis hypogaea HOM05D002474 ORTHO05D006727 3.9e-157 559.3 496 59.7
Nitab4.5_0002699g0040 Nicotiana tabacum HOM05D002474 ORTHO05D006727 8.6e-157 558.1 483 60.0
CARHR262240 Cardamine hirsuta HOM05D002474 ORTHO05D006727 1.9e-156 557.0 480 60.4
Migut.K01338 Erythranthe guttata HOM05D002474 ORTHO05D006727 1.2e-155 554.3 499 58.1
CiPaw.04G020500 Carya illinoinensis HOM05D002474 ORTHO05D006727 2.1e-155 553.5 490 61.2
Carub.0007s3579 Capsella rubella HOM05D002474 ORTHO05D006727 4.7e-155 552.4 491 59.1
AL7G50200 Arabidopsis lyrata HOM05D002474 ORTHO05D006727 6.2e-155 552.0 491 58.5
PSO161G0033 Papaver somniferum HOM05D002474 ORTHO05D006727 6.2e-155 552.0 478 60.9
BraA04t16928Z Brassica rapa HOM05D002474 ORTHO05D006727 4.0e-154 549.3 514 58.4
TAR629G1594 Trochodendron aralioides HOM05D002474 ORTHO05D006727 1.2e-153 547.7 484 60.3
THA.LOC104805441 Tarenaya hassleriana HOM05D002474 ORTHO05D006727 5.8e-153 545.4 477 59.5
Cfa007503 Carpinus fangiana HOM05D002474 ORTHO05D006727 7.5e-153 545.0 551 55.0
AT5G39940 Arabidopsis thaliana HOM05D002474 ORTHO05D006727 2.2e-152 543.5 487 59.1
Sabra04G0087600 Salix brachista HOM05D002474 ORTHO05D006727 4.9e-152 542.3 511 57.7
AUR62031654 Chenopodium quinoa HOM05D002474 ORTHO05D006727 3.2e-151 539.7 538 55.8
RhsimUnG0054500 Rhododendron simsii HOM05D002474 ORTHO05D006727 3.2e-151 539.7 547 55.8
Duzib168G1861 Durio zibethinus HOM05D002474 ORTHO05D006727 7.1e-151 538.5 462 61.7
CDE08G1502 Ceratophyllum demersum HOM05D002474 ORTHO05D006727 1.2e-150 537.7 480 58.1
Haze_14590 Corylus avellana HOM05D002474 ORTHO05D006727 1.0e-149 534.6 523 56.4
unitig_748.g8621 Utricularia gibba HOM05D002474 ORTHO05D006727 1.0e-149 534.6 478 57.7
VMungo0464G0136 Vigna mungo HOM05D002474 ORTHO05D006727 1.3e-149 534.3 500 57.2
Aa31LG9G1670 Aethionema arabicum HOM05D002474 ORTHO05D006727 1.7e-149 533.9 478 59.0
COL.COLO4_24935 Corchorus olitorius HOM05D002474 ORTHO05D006727 1.7e-149 533.9 477 58.9
Nitab4.5_0023901g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 1.2e-147 527.7 460 60.2
Thhalv10028129m.g Eutrema salsugineum HOM05D002474 ORTHO05D006727 4.7e-147 525.8 493 56.2
PGR083G0251 Punica granatum HOM05D002474 ORTHO05D006727 1.8e-146 523.9 486 57.6
SGA_v2.0_scaffold224G42953 Striga asiatica HOM05D002474 ORTHO05D006727 3.4e-145 519.6 498 55.4
FAN02G0112 Fragaria x ananassa HOM05D002474 ORTHO05D006727 4.4e-145 519.2 492 55.7
ATR0609G116 Amborella trichopoda HOM05D002474 ORTHO05D006727 6.4e-144 515.4 476 56.9
arahy.Tifrunner.gnm1.ann1.DRNA5E Arachis hypogaea HOM05D002474 ORTHO05D006727 1.9e-143 513.8 496 56.5
Glyma.19G019000 Glycine max HOM05D002474 ORTHO05D006727 5.4e-143 512.3 509 54.6
TWI60G0106 Tripterygium wilfordii HOM05D002474 ORTHO05D006727 5.4e-143 512.3 507 56.0
Os12g0638800 Oryza sativa ssp. japonica HOM05D002474 ORTHO05D006727 7.8e-142 508.4 481 55.1
Zm00001eb033100 Zea mays HOM05D002474 ORTHO05D006727 1.0e-141 508.1 499 53.7
Cpa.g.sc14.49 Carica papaya HOM05D002474 ORTHO05D006727 2.3e-141 506.9 509 55.0
CANSAT64G2711 Cannabis sativa HOM05D002474 ORTHO05D006727 6.6e-141 505.4 520 55.4
FAN14G2185 Fragaria x ananassa HOM05D002474 ORTHO05D006727 7.3e-140 501.9 524 52.5
ClCG09G018440 Citrullus lanatus HOM05D002474 ORTHO05D006727 8.1e-139 498.4 552 49.8
BcaB06g27397 Brassica carinata HOM05D002474 ORTHO05D006727 9.0e-138 495.0 467 56.5
Rhsim10G0032000 Rhododendron simsii HOM05D002474 ORTHO05D006727 5.8e-137 492.3 481 56.3
Sed0010242 Sechium edule HOM05D002474 ORTHO05D006727 1.7e-133 480.7 422 58.8
FAN05G2709 Fragaria x ananassa HOM05D002474 ORTHO05D006727 6.6e-133 478.8 493 53.8
Dinv33713 Davidia involucrata HOM05D002474 ORTHO05D006727 1.1e-132 478.0 408 61.5
FAN09G4837 Fragaria x ananassa HOM05D002474 ORTHO05D006727 2.5e-132 476.9 524 50.8
Peaxi162Scf00059g00319 Petunia axillaris HOM05D002474 ORTHO05D006727 5.6e-132 475.7 474 53.8
C04p46420 Brassica napus HOM05D002474 ORTHO05D006727 4.8e-131 472.6 458 53.9
A04p12710 Brassica napus HOM05D002474 ORTHO05D006727 4.0e-130 469.5 458 55.5
DCAR_011168 Daucus carota HOM05D002474 ORTHO05D006727 6.9e-130 468.8 404 60.9
CSS0037906 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 2.0e-129 467.2 410 61.7
AagrBONN_evm.TU.Sc2ySwM_369.199 Anthoceros agrestis HOM05D002474 ORTHO05D006727 3.9e-125 453.0 488 48.0
AUR62018296 Chenopodium quinoa HOM05D002474 ORTHO05D006727 9.6e-124 448.4 479 52.8
Mapoly0035s0063 Marchantia polymorpha HOM05D002474 ORTHO05D006727 1.7e-120 437.6 485 48.5
Pp3c23_2270 Physcomitrium patens HOM05D002474 ORTHO05D006727 4.9e-120 436.0 480 49.2
vmacro05750 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 8.4e-120 435.3 477 51.2
HanXRQChr16g0519921 Helianthus annuus HOM05D002474 ORTHO05D006727 2.3e-117 427.2 390 59.0
Prupe.3G272800 Prunus persica HOM05D002474 ORTHO05D006727 6.2e-115 419.1 384 59.6
Hund13251 Selenicereus undatus HOM05D002474 ORTHO05D006727 1.9e-111 407.5 224 97.3
SalBow1G0883 Salvia bowleyana HOM05D002474 ORTHO05D006727 2.6e-105 387.1 480 48.1
Hma1.2p1_0449F.1_g154940 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 2.8e-99 367.1 383 53.5
SMO137G0254 Selaginella moellendorffii HOM05D002474 ORTHO05D006727 8.2e-99 365.5 519 40.8
HPP92_014139 Vanilla planifolia HOM05D002474 ORTHO05D006727 4.8e-91 339.7 479 41.8
Manes.S095220 Manihot esculenta HOM05D002474 ORTHO05D006727 5.3e-90 336.3 359 53.5
Cc07_g02920 Coffea canephora HOM05D002474 ORTHO05D006727 4.4e-84 316.6 301 57.5
QL02p080117 Quercus lobata HOM05D002474 ORTHO05D006727 4.2e-79 300.1 239 68.6
QL02p080121 Quercus lobata HOM05D002474 ORTHO05D006727 2.0e-76 291.2 190 74.2
Cc07_g02930 Coffea canephora HOM05D002474 ORTHO05D006727 1.6e-70 271.6 195 68.2
CBR_g50657 Chara braunii HOM05D002474 ORTHO05D006727 5.2e-69 266.5 375 41.1
Rhsim10G0031600 Rhododendron simsii HOM05D002474 ORTHO05D006727 9.1e-66 255.8 253 54.9
Hund13250 Selenicereus undatus HOM05D002474 ORTHO05D006727 7.7e-65 252.7 130 94.6
BolC4t26228H Brassica oleracea HOM05D002474 ORTHO05D006727 2.3e-53 214.5 185 57.8
Lj7A402G46 Lonicera japonica HOM05D002474 ORTHO05D006727 5.6e-47 193.4 372 37.4
Lsat_1_v5_gn_6_77521 Lactuca sativa HOM05D002474 ORTHO05D006727 9.5e-39 166.0 344 34.9
Lj7A402G47 Lonicera japonica HOM05D002474 ORTHO05D006727 3.1e-37 161.0 96 77.1
SpUN0485_0010 Schrenkiella parvula HOM05D002474 ORTHO05D006727 5.2e-37 160.2 122 63.9
HanXRQChr09g0265421 Helianthus annuus HOM05D002474 ORTHO05D006727 6.8e-37 159.8 116 65.5
CBR_g59258 Chara braunii HOM05D002474 ORTHO05D006727 2.6e-36 157.9 113 63.7
SEGI_37465 Sequoiadendron giganteum HOM05D002474 ORTHO05D006727 3.3e-31 141.0 87 67.8
Sp7g01810 Schrenkiella parvula HOM05D002474 ORTHO05D006727 2.1e-30 138.3 152 50.0
SEGI_13584 Sequoiadendron giganteum HOM05D002474 ORTHO05D006727 2.8e-30 137.9 210 40.0
C09p60950 Brassica napus HOM05D002474 ORTHO05D006727 4.6e-25 120.6 117 52.1
Actinidia35021 Actinidia chinensis HOM05D002474 ORTHO05D006727 8.7e-24 116.3 140 48.6
Lsat_1_v5_gn_2_107941 Lactuca sativa HOM05D002474 ORTHO05D005260 2.5e-23 114.8 103 59.2
BolC9t56457H Brassica oleracea HOM05D002474 ORTHO05D006727 8.1e-22 109.8 102 52.0
C09p36190 Brassica napus HOM05D002474 ORTHO05D006727 2.9e-19 101.3 96 52.1
MBI04_g20673_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D006727 1.9e-15 88.6 77 53.2
Rhsim10G0031800 Rhododendron simsii HOM05D002474 ORTHO05D006727 8.1e-14 83.2 53 69.8
MBI04_g20672_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D006727 2.4e-13 81.6 282 27.0
MCO07G529 Micromonas commoda HOM05D002474 ORTHO05D006727 1.2e-12 79.3 485 23.3
BcaC04g18910 Brassica carinata HOM05D002474 ORTHO05D006727 7.6e-12 76.6 116 37.1
FAN10G3970 Fragaria x ananassa HOM05D002474 ORTHO05D006727 6.4e-11 73.6 53 67.9
vmacro05749 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 5.5e-10 70.5 40 75.0
vmacro03926 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 7.1e-10 70.1 40 75.0
FAN10G3068 Fragaria x ananassa HOM05D002474 ORTHO05D006727 1.8e-08 65.5 45 71.1
Glyma.13G065601 Glycine max HOM05D002474 ORTHO05D006727 2.3e-08 65.1 49 67.3
Peaxi162Scf00036g01918 Petunia axillaris HOM05D002474 ORTHO05D006727 7.4e-07 60.1 59 44.1
Cre09.g389400 Chlamydomonas reinhardtii HOM05D002474 ORTHO05D006727 4.8e-06 57.4 82 39.0


User provided reference genes

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