Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund13139 Selenicereus undatus HOM05D006882 ORTHO05D008688 5.6e-68 260.8 127 100.0
AUR62038673 Chenopodium quinoa HOM05D006882 ORTHO05D008688 5.6e-28 127.9 139 56.1
AUR62018188 Chenopodium quinoa HOM05D006882 ORTHO05D008688 1.1e-26 123.6 138 53.6
Ah.12g062710 Amaranthus hybridus HOM05D006882 ORTHO05D008688 2.5e-20 102.4 104 51.0
GSVIVG01032906001 Vitis vinifera HOM05D006882 ORTHO05D008688 1.6e-19 99.8 116 50.0
Dinv34941 Davidia involucrata HOM05D006882 ORTHO05D008688 2.4e-18 95.9 117 47.0
Gohir.D11G077000 Gossypium hirsutum HOM05D006882 ORTHO05D008688 9.0e-18 94.0 113 52.2
Gorai.007G082700 Gossypium raimondii HOM05D006882 ORTHO05D008688 1.2e-17 93.6 113 52.2
COL.COLO4_04934 Corchorus olitorius HOM05D006882 ORTHO05D008688 2.0e-17 92.8 119 47.9
CiPaw.03G088500 Carya illinoinensis HOM05D006882 ORTHO05D008688 4.5e-17 91.7 103 49.5
Sc14g0006330 Simmondsia chinensis HOM05D006882 ORTHO05D008688 4.5e-17 91.7 107 53.3
Thecc.04G095700 Theobroma cacao HOM05D006882 ORTHO05D008688 1.0e-16 90.5 103 54.4
Gohir.A11G072700 Gossypium hirsutum HOM05D006882 ORTHO05D008688 1.3e-16 90.1 113 51.3
Prupe.3G254900 Prunus persica HOM05D006882 ORTHO05D008688 2.9e-16 89.0 100 51.0
Cfa007668 Carpinus fangiana HOM05D006882 ORTHO05D008688 3.8e-16 88.6 61 68.9
vmacro05638 Vaccinium macrocarpon HOM05D006882 ORTHO05D008688 5.0e-16 88.2 104 51.9
MD17G1059700 Malus domestica HOM05D006882 ORTHO05D008688 6.5e-16 87.8 83 56.6
MD09G1066800 Malus domestica HOM05D006882 ORTHO05D008688 8.5e-16 87.4 88 53.4
Cc07_g04230 Coffea canephora HOM05D006882 ORTHO05D008688 1.4e-15 86.7 110 45.5
Haze_14430 Corylus avellana HOM05D006882 ORTHO05D008688 1.9e-15 86.3 61 67.2
QL02p067584 Quercus lobata HOM05D006882 ORTHO05D008688 1.9e-15 86.3 106 47.2
Duzib147G0673 Durio zibethinus HOM05D006882 ORTHO05D008688 2.5e-15 85.9 117 47.9
Eucgr.I02034 Eucalyptus grandis HOM05D006882 ORTHO05D008688 2.5e-15 85.9 94 51.1
Atru.chr8.430 Acer truncatum HOM05D006882 ORTHO05D008688 3.2e-15 85.5 94 50.0
Phvul.004G037300 Phaseolus vulgaris HOM05D006882 ORTHO05D008688 3.2e-15 85.5 123 45.5
PGR004G1649 Punica granatum HOM05D006882 ORTHO05D008688 5.5e-15 84.7 105 47.6
arahy.Tifrunner.gnm1.ann1.PJ6ZH1 Arachis hypogaea HOM05D006882 ORTHO05D008688 7.2e-15 84.3 68 60.3
arahy.Tifrunner.gnm1.ann1.YR6PCG Arachis hypogaea HOM05D006882 ORTHO05D008688 7.2e-15 84.3 68 60.3
DCAR_025431 Daucus carota HOM05D006882 ORTHO05D008688 9.4e-15 84.0 52 71.2
Glyma.19G030100 Glycine max HOM05D006882 ORTHO05D008688 1.2e-14 83.6 121 47.1
CANSAT64G2010 Cannabis sativa HOM05D006882 ORTHO05D008688 1.6e-14 83.2 110 46.4
Potri.017G094200 Populus trichocarpa HOM05D006882 ORTHO05D008688 1.6e-14 83.2 112 46.4
Duzib187G0261 Durio zibethinus HOM05D006882 ORTHO05D008688 2.1e-14 82.8 66 65.2
Oeu062161.1 Olea europaea HOM05D006882 ORTHO05D008688 2.1e-14 82.8 118 43.2
Sp3g01180 Schrenkiella parvula HOM05D006882 ORTHO05D008688 2.1e-14 82.8 121 46.3
Duzib264G0735 Durio zibethinus HOM05D006882 ORTHO05D008688 2.7e-14 82.4 101 49.5
Hma1.2p1_0481F.1_g162213 Hydrangea macrophylla HOM05D006882 ORTHO05D008688 2.7e-14 82.4 111 48.6
THA.LOC104822332 Tarenaya hassleriana HOM05D006882 ORTHO05D008688 2.7e-14 82.4 110 44.5
AT3G02120 Arabidopsis thaliana HOM05D006882 ORTHO05D008688 3.6e-14 82.0 118 45.8
Carub.0003s0123 Capsella rubella HOM05D006882 ORTHO05D008688 3.6e-14 82.0 117 44.4
RcHm_v2.0_Chr2g0165841 Rosa chinensis HOM05D006882 ORTHO05D008688 3.6e-14 82.0 95 50.5
VMungo0464G1672 Vigna mungo HOM05D006882 ORTHO05D008688 3.6e-14 82.0 124 43.5
Sabra17G0083000 Salix brachista HOM05D006882 ORTHO05D008688 4.6e-14 81.6 56 69.6
ClCG07G016320 Citrullus lanatus HOM05D006882 ORTHO05D008688 7.9e-14 80.9 62 66.1
Dinv33828 Davidia involucrata HOM05D006882 ORTHO05D008688 7.9e-14 80.9 66 63.6
Rhsim10G0049600 Rhododendron simsii HOM05D006882 ORTHO05D008688 7.9e-14 80.9 63 65.1
AL3G11350 Arabidopsis lyrata HOM05D006882 ORTHO05D008688 1.4e-13 80.1 112 46.4
SalBow1G1386 Salvia bowleyana HOM05D006882 ORTHO05D008688 2.3e-13 79.3 91 50.5
SalBow1G4555 Salvia bowleyana HOM05D006882 ORTHO05D008688 2.3e-13 79.3 91 50.5
Aqoxy3G00507 Aquilegia oxysepala HOM05D006882 ORTHO05D008688 3.0e-13 79.0 109 45.9
Ca_04305_v3 Cicer arietinum L. HOM05D006882 ORTHO05D008688 3.0e-13 79.0 94 45.7
Ciclev10003349m.g Citrus clementina HOM05D006882 ORTHO05D008688 3.9e-13 78.6 69 58.0
Glyma.13G056500 Glycine max HOM05D006882 ORTHO05D008688 5.1e-13 78.2 98 51.0
Manes.01G096000 Manihot esculenta HOM05D006882 ORTHO05D008688 5.1e-13 78.2 93 49.5
Peaxi162Scf00166g00424 Petunia axillaris HOM05D006882 ORTHO05D008688 5.1e-13 78.2 68 61.8
Ciclev10003470m.g Citrus clementina HOM05D006882 ORTHO05D008688 6.7e-13 77.8 68 58.8
Sed0003732 Sechium edule HOM05D006882 ORTHO05D008688 6.7e-13 77.8 123 37.4
TWI60G1503 Tripterygium wilfordii HOM05D006882 ORTHO05D008688 6.7e-13 77.8 119 42.9
Lalb_Chr06g0174961 Lupinus albus HOM05D006882 ORTHO05D008688 1.1e-12 77.0 110 44.5
Potri.004G120200 Populus trichocarpa HOM05D006882 ORTHO05D008688 1.1e-12 77.0 51 70.6
Ciclev10027312m.g Citrus clementina HOM05D006882 ORTHO05D008688 1.5e-12 76.6 69 56.5
TPR.G10007 Trifolium pratense HOM05D006882 ORTHO05D008688 1.9e-12 76.3 123 41.5
CARHR076080 Cardamine hirsuta HOM05D006882 ORTHO05D008688 3.3e-12 75.5 62 59.7
Lj2g0004633 Lotus japonicus HOM05D006882 ORTHO05D008688 3.3e-12 75.5 120 40.8
Medtr6g015260 Medicago truncatula HOM05D006882 ORTHO05D008688 3.3e-12 75.5 65 53.8
CsaV3_4G009150 Cucumis sativus L. HOM05D006882 ORTHO05D008688 4.3e-12 75.1 59 64.4
Gohir.D09G008650 Gossypium hirsutum HOM05D006882 ORTHO05D008688 4.3e-12 75.1 62 56.5
Medtr6g015280 Medicago truncatula HOM05D006882 ORTHO05D008688 4.3e-12 75.1 104 44.2
Psat1g068840 Pisum sativum HOM05D006882 ORTHO05D008688 4.3e-12 75.1 71 52.1
TAR371G1018 Trochodendron aralioides HOM05D006882 ORTHO05D008688 4.3e-12 75.1 96 46.9
FAN05G2472 Fragaria x ananassa HOM05D006882 ORTHO05D008688 7.4e-12 74.3 78 52.6
Gorai.006G010400 Gossypium raimondii HOM05D006882 ORTHO05D008688 7.4e-12 74.3 62 56.5
MSTRG.23884 Avicennia marina HOM05D006882 ORTHO05D008688 9.7e-12 73.9 91 45.1
Migut.H00624 Erythranthe guttata HOM05D006882 ORTHO05D008688 1.7e-11 73.2 53 60.4
MSTRG.2998 Avicennia marina HOM05D006882 ORTHO05D008688 2.2e-11 72.8 95 46.3
Ciclev10013137m.g Citrus clementina HOM05D006882 ORTHO05D008688 2.8e-11 72.4 66 60.6
Glyma.01G085200 Glycine max HOM05D006882 ORTHO05D008688 2.8e-11 72.4 102 47.1
FvH4_6g46850 Fragaria vesca HOM05D006882 ORTHO05D008688 3.7e-11 72.0 78 51.3
FAN09G3572 Fragaria x ananassa HOM05D006882 ORTHO05D008688 3.7e-11 72.0 78 51.3
FAN14G0989 Fragaria x ananassa HOM05D006882 ORTHO05D008688 3.7e-11 72.0 78 51.3
PGSC0003DMG400001358 Solanum tuberosum HOM05D006882 ORTHO05D008688 3.7e-11 72.0 53 69.8
Aa31LG5G12650 Aethionema arabicum HOM05D006882 ORTHO05D008688 4.8e-11 71.6 62 56.5
Solyc02g088830.4 Solanum lycopersicum HOM05D006882 ORTHO05D008688 4.8e-11 71.6 97 49.5
Sopen02g033540 Solanum pennellii HOM05D006882 ORTHO05D008688 4.8e-11 71.6 47 74.5
BcaB07g32783 Brassica carinata HOM05D006882 ORTHO05D008688 6.3e-11 71.2 106 42.5
Peaxi162Scf00254g00028 Petunia axillaris HOM05D006882 ORTHO05D008688 6.3e-11 71.2 55 63.6
FAN02G1963 Fragaria x ananassa HOM05D006882 ORTHO05D008688 1.1e-10 70.5 78 51.3
TWI34G0355 Tripterygium wilfordii HOM05D006882 ORTHO05D008688 1.4e-10 70.1 59 66.1
Gohir.A09G009600 Gossypium hirsutum HOM05D006882 ORTHO05D008688 2.4e-10 69.3 62 56.5
Nn1g08730 Nelumbo nucifera HOM05D006882 ORTHO05D008688 3.1e-10 68.9 52 61.5
Nitab4.5_0003841g0040 Nicotiana tabacum HOM05D006882 ORTHO05D008688 3.1e-10 68.9 61 59.0
Manes.02G055100 Manihot esculenta HOM05D006882 ORTHO05D008688 4.1e-10 68.6 63 57.1
Peaxi162Scf00298g00055 Petunia axillaris HOM05D006882 ORTHO05D008688 4.1e-10 68.6 63 54.0
HanXRQChr07g0199771 Helianthus annuus HOM05D006882 ORTHO05D008688 5.3e-10 68.2 59 54.2
Cpa.g.sc14.176 Carica papaya HOM05D006882 ORTHO05D008688 1.2e-09 67.0 66 53.0
Peaxi162Scf00329g00037 Petunia axillaris HOM05D006882 ORTHO05D008688 1.2e-09 67.0 55 61.8
Lsat_1_v5_gn_2_90100 Lactuca sativa HOM05D006882 ORTHO05D008688 1.5e-09 66.6 69 50.7
ATR0177G043 Amborella trichopoda HOM05D006882 ORTHO05D008688 3.4e-09 65.5 58 56.9
PSO017G6201 Papaver somniferum HOM05D006882 ORTHO05D008688 4.5e-09 65.1 66 53.0
BraA09t39034Z Brassica rapa HOM05D006882 ORTHO05D008688 7.7e-09 64.3 52 63.5
BcaC05g27151 Brassica carinata HOM05D006882 ORTHO05D008688 1.0e-08 63.9 52 61.5
A09p35030 Brassica napus HOM05D006882 ORTHO05D008688 1.0e-08 63.9 97 45.4
C05p30380 Brassica napus HOM05D006882 ORTHO05D008688 1.0e-08 63.9 52 61.5
BolC5t31777H Brassica oleracea HOM05D006882 ORTHO05D008688 1.0e-08 63.9 52 61.5
ECA238G0863 Erigeron canadensis HOM05D006882 ORTHO05D008688 1.7e-08 63.2 77 48.1
MBI16_g10826_MAGBIO Magnolia biondii HOM05D006882 ORTHO05D008688 3.8e-08 62.0 44 61.4
Peaxi162Scf00025g00208 Petunia axillaris HOM05D006882 ORTHO05D008688 6.5e-08 61.2 67 53.7
arahy.Tifrunner.gnm1.ann1.K9PA59 Arachis hypogaea HOM05D006882 ORTHO05D008688 2.5e-07 59.3 52 53.8
Peaxi162Scf00271g00524 Petunia axillaris HOM05D006882 ORTHO05D008688 7.2e-07 57.8 33 78.8
Mapoly0103s0008 Marchantia polymorpha HOM05D022139 ORTHO05D008688 2.7e-06 55.8 43 67.4
CsaV3_5G014380 Cucumis sativus L. HOM05D006882 ORTHO05D008688 6.1e-06 54.7 62 51.6


User provided reference genes

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