Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund13108 Selenicereus undatus HOM05D006243 ORTHO05D007688 3.7e-149 531.6 275 100.0
AUR62038703 Chenopodium quinoa HOM05D006243 ORTHO05D007688 2.8e-109 399.1 250 84.4
AUR62018213 Chenopodium quinoa HOM05D006243 ORTHO05D007688 1.8e-108 396.4 250 84.0
Sabra17G0107600 Salix brachista HOM05D006243 ORTHO05D007688 7.7e-107 391.0 259 78.4
EL10Ac2g03168 Beta vulgaris HOM05D006243 ORTHO05D007688 2.9e-106 389.0 248 83.1
Potri.017G129100 Populus trichocarpa HOM05D006243 ORTHO05D007688 6.6e-106 387.9 261 77.4
Sc10g0004760 Simmondsia chinensis HOM05D006243 ORTHO05D007688 6.6e-106 387.9 263 79.5
CANSAT64G2718 Cannabis sativa HOM05D006243 ORTHO05D007688 5.5e-105 384.8 261 78.5
TAR629G1693 Trochodendron aralioides HOM05D006243 ORTHO05D007688 1.2e-104 383.6 260 79.2
Manes.01G117900 Manihot esculenta HOM05D006243 ORTHO05D007688 2.8e-104 382.5 258 79.1
GSVIVG01030779001 Vitis vinifera HOM05D006243 ORTHO05D007688 3.6e-104 382.1 255 79.6
TPR.G8275 Trifolium pratense HOM05D006243 ORTHO05D007688 6.1e-104 381.3 274 74.8
Thecc.04G115200 Theobroma cacao HOM05D006243 ORTHO05D007688 1.0e-103 380.6 256 80.5
Atru.chr1.1900 Acer truncatum HOM05D006243 ORTHO05D007688 1.4e-103 380.2 263 77.6
Prupe.3G161300 Prunus persica HOM05D006243 ORTHO05D007688 6.8e-103 377.9 259 79.5
Cpa.g.sc67.47 Carica papaya HOM05D006243 ORTHO05D007688 1.2e-102 377.1 261 77.8
Haze_14258 Corylus avellana HOM05D006243 ORTHO05D007688 1.2e-102 377.1 260 79.2
Ciclev10011587m.g Citrus clementina HOM05D006243 ORTHO05D007688 1.5e-102 376.7 259 78.4
Gohir.A07G078300 Gossypium hirsutum HOM05D006243 ORTHO05D007688 2.0e-102 376.3 254 79.1
MD09G1263800 Malus domestica HOM05D006243 ORTHO05D007688 2.6e-102 375.9 259 78.8
Cfa007817 Carpinus fangiana HOM05D006243 ORTHO05D007688 3.4e-102 375.6 260 78.8
Gorai.001G088700 Gossypium raimondii HOM05D006243 ORTHO05D007688 5.7e-102 374.8 254 79.1
Gohir.D07G083100 Gossypium hirsutum HOM05D006243 ORTHO05D007688 7.5e-102 374.4 254 79.1
MD17G1259100 Malus domestica HOM05D006243 ORTHO05D007688 7.5e-102 374.4 260 77.7
Duzib133G1335 Durio zibethinus HOM05D006243 ORTHO05D007688 1.7e-101 373.2 256 78.5
CSS0038083 Camellia sinensis var. sinensis HOM05D006243 ORTHO05D007688 1.1e-100 370.5 245 79.6
CiPaw.03G071500 Carya illinoinensis HOM05D006243 ORTHO05D007688 9.2e-100 367.5 256 75.8
Actinidia06497 Actinidia chinensis HOM05D006243 ORTHO05D007688 1.6e-99 366.7 257 75.1
Rhsim10G0177000 Rhododendron simsii HOM05D006243 ORTHO05D007688 2.7e-99 365.9 254 76.0
vmacro07692 Vaccinium macrocarpon HOM05D006243 ORTHO05D007688 2.7e-99 365.9 274 71.5
Cc07_g13520 Coffea canephora HOM05D006243 ORTHO05D007688 4.6e-99 365.2 259 73.7
COL.COLO4_10159 Corchorus olitorius HOM05D006243 ORTHO05D007688 1.0e-98 364.0 289 69.9
Sp5g21350 Schrenkiella parvula HOM05D006243 ORTHO05D007688 1.3e-98 363.6 254 75.6
TWI53G0799 Tripterygium wilfordii HOM05D006243 ORTHO05D007688 1.7e-98 363.2 260 75.0
CARHR058210 Cardamine hirsuta HOM05D006243 ORTHO05D007688 2.3e-98 362.8 248 77.4
BcaB05g24167 Brassica carinata HOM05D006243 ORTHO05D007688 2.9e-98 362.5 258 74.8
CsaV3_3G020810 Cucumis sativus L. HOM05D006243 ORTHO05D007688 2.9e-98 362.5 257 74.3
Glyma.02G245300 Glycine max HOM05D006243 ORTHO05D007688 5.0e-98 361.7 297 66.7
LjContig00141g0011202 Lotus japonicus HOM05D006243 ORTHO05D007688 6.6e-98 361.3 276 71.7
Eucgr.J01597 Eucalyptus grandis HOM05D006243 ORTHO05D007688 8.6e-98 360.9 254 74.0
RcHm_v2.0_Chr3g0493131 Rosa chinensis HOM05D006243 ORTHO05D007688 8.6e-98 360.9 259 75.3
BcaB03g15275 Brassica carinata HOM05D006243 ORTHO05D007688 1.1e-97 360.5 248 76.6
Peaxi162Scf00305g00613 Petunia axillaris HOM05D006243 ORTHO05D007688 1.5e-97 360.1 257 72.8
THA.LOC104805617 Tarenaya hassleriana HOM05D006243 ORTHO05D007688 1.5e-97 360.1 252 77.0
Lalb_Chr10g0104381 Lupinus albus HOM05D006243 ORTHO05D007688 1.9e-97 359.8 261 73.2
ClCG05G011500 Citrullus lanatus HOM05D006243 ORTHO05D007688 5.6e-97 358.2 257 74.3
Lsat_1_v5_gn_3_64500 Lactuca sativa HOM05D006243 ORTHO05D007688 5.6e-97 358.2 278 69.4
arahy.Tifrunner.gnm1.ann1.Y3W4B5 Arachis hypogaea HOM05D006243 ORTHO05D007688 9.5e-97 357.5 261 73.2
Lj4A263G87 Lonicera japonica HOM05D006243 ORTHO05D007688 1.2e-96 357.1 266 71.8
Aa31LG2G3000 Aethionema arabicum HOM05D006243 ORTHO05D007688 1.6e-96 356.7 256 73.8
Migut.H02264 Erythranthe guttata HOM05D006243 ORTHO05D007688 4.7e-96 355.1 253 71.9
Carub.0002s1234 Capsella rubella HOM05D006243 ORTHO05D007688 6.1e-96 354.8 255 73.3
Medtr5g078290 Medicago truncatula HOM05D006243 ORTHO05D007688 6.1e-96 354.8 256 74.6
AT1G66330 Arabidopsis thaliana HOM05D006243 ORTHO05D007688 8.0e-96 354.4 254 74.0
Phvul.008G235800 Phaseolus vulgaris HOM05D006243 ORTHO05D007688 1.0e-95 354.0 294 66.3
MELO3C020192.2 Cucumis melo HOM05D006243 ORTHO05D007688 1.4e-95 353.6 256 73.0
Solyc11g011170.2 Solanum lycopersicum HOM05D006243 ORTHO05D007688 1.4e-95 353.6 243 75.7
BraA07t30960Z Brassica rapa HOM05D006243 ORTHO05D007688 1.8e-95 353.2 242 78.1
CAN.G222.23 Capsicum annuum HOM05D006243 ORTHO05D007688 1.8e-95 353.2 243 75.7
Aqoxy3G00051 Aquilegia oxysepala HOM05D006243 ORTHO05D007688 3.1e-95 352.4 252 74.2
PGSC0003DMG402015686 Solanum tuberosum HOM05D006243 ORTHO05D007688 3.1e-95 352.4 242 75.6
AL2G24050 Arabidopsis lyrata HOM05D006243 ORTHO05D007688 4.0e-95 352.1 254 74.0
DCAR_014173 Daucus carota HOM05D006243 ORTHO05D007688 5.2e-95 351.7 260 70.8
Nn4g24254 Nelumbo nucifera HOM05D006243 ORTHO05D007688 5.2e-95 351.7 253 75.1
Sopen11g005930 Solanum pennellii HOM05D006243 ORTHO05D007688 5.2e-95 351.7 243 75.3
BcaC08g46068 Brassica carinata HOM05D006243 ORTHO05D007688 8.9e-95 350.9 242 77.7
ECA246G3278 Erigeron canadensis HOM05D006243 ORTHO05D007688 8.9e-95 350.9 254 72.8
BraA02t06418Z Brassica rapa HOM05D006243 ORTHO05D007688 1.2e-94 350.5 254 74.0
FvH4_1g28740 Fragaria vesca HOM05D006243 ORTHO05D007688 1.2e-94 350.5 259 73.0
FAN19G0552 Fragaria x ananassa HOM05D006243 ORTHO05D007688 1.2e-94 350.5 259 73.0
Oeu032326.2 Olea europaea HOM05D006243 ORTHO05D007688 1.2e-94 350.5 252 73.4
MSTRG.23392 Avicennia marina HOM05D006243 ORTHO05D007688 1.5e-94 350.1 255 71.8
SalBow3G2874 Salvia bowleyana HOM05D006243 ORTHO05D007688 1.5e-94 350.1 255 71.0
FAN28G0309 Fragaria x ananassa HOM05D006243 ORTHO05D007688 2.6e-94 349.4 259 73.0
FAN26G0580 Fragaria x ananassa HOM05D006243 ORTHO05D007688 3.4e-94 349.0 259 72.6
A07p33290 Brassica napus HOM05D006243 ORTHO05D007688 4.4e-94 348.6 243 77.8
BcaC03g14742 Brassica carinata HOM05D006243 ORTHO05D007688 5.8e-94 348.2 254 73.6
BolC2t08324H Brassica oleracea HOM05D006243 ORTHO05D007688 5.8e-94 348.2 254 73.6
PSO017G3733 Papaver somniferum HOM05D006243 ORTHO05D007688 1.3e-93 347.1 266 69.9
Oeu012257.1 Olea europaea HOM05D006243 ORTHO05D007688 1.7e-93 346.7 255 72.9
C06p39620 Brassica napus HOM05D006243 ORTHO05D007688 2.2e-93 346.3 243 77.4
BolC6t39055H Brassica oleracea HOM05D006243 ORTHO05D007688 2.2e-93 346.3 243 77.4
C02p21930 Brassica napus HOM05D006243 ORTHO05D007688 1.4e-92 343.6 231 78.4
HanXRQChr13g0418351 Helianthus annuus HOM05D006243 ORTHO05D007688 1.4e-92 343.6 266 69.2
PSO478G0940 Papaver somniferum HOM05D006243 ORTHO05D007688 2.0e-91 339.7 260 69.6
A02p13590 Brassica napus HOM05D006243 ORTHO05D007688 2.7e-91 339.3 229 78.2
ATR0317G069 Amborella trichopoda HOM05D006243 ORTHO05D007688 4.6e-91 338.6 258 68.6
unitig_736.g22596 Utricularia gibba HOM05D006243 ORTHO05D007688 1.0e-90 337.4 261 68.6
Lalb_Chr17g0346141 Lupinus albus HOM05D006243 ORTHO05D007688 9.5e-89 330.9 259 69.5
Zm00001eb165460 Zea mays HOM05D006243 ORTHO05D007688 2.1e-88 329.7 263 66.9
CDE04G1800 Ceratophyllum demersum HOM05D006243 ORTHO05D007688 1.2e-86 323.9 253 68.8
Os05g0148700 Oryza sativa ssp. japonica HOM05D006243 ORTHO05D007688 2.2e-85 319.7 261 66.3
SEGI_26344 Sequoiadendron giganteum HOM05D006243 ORTHO05D007688 4.9e-85 318.5 258 65.1
PGR004G2672 Punica granatum HOM05D006243 ORTHO05D007688 1.4e-84 317.0 209 80.4
HPP92_027416 Vanilla planifolia HOM05D006243 ORTHO05D007688 1.6e-83 313.5 251 67.3
Glyma.14G215400 Glycine max HOM05D006243 ORTHO05D007688 6.2e-80 301.6 243 68.7
arahy.Tifrunner.gnm1.ann1.SFD8TD Arachis hypogaea HOM05D006243 ORTHO05D007688 6.8e-79 298.1 257 65.8
Nitab4.5_0000201g0240 Nicotiana tabacum HOM05D006243 ORTHO05D007688 8.9e-79 297.7 243 66.3
Ca_05826_v3 Cicer arietinum L. HOM05D006243 ORTHO05D007688 3.3e-73 279.3 283 59.0
SGA_v2.0_scaffold108G30955 Striga asiatica HOM05D006243 ORTHO05D007688 1.2e-72 277.3 256 62.9
Actinidia17213 Actinidia chinensis HOM05D006243 ORTHO05D007688 4.7e-72 275.4 192 75.5
MD17G1258600 Malus domestica HOM05D006243 ORTHO05D007688 1.3e-69 267.3 227 68.7
Nitab4.5_0009518g0020 Nicotiana tabacum HOM05D006243 ORTHO05D007688 1.2e-67 260.8 243 60.1
Ah.10g032360 Amaranthus hybridus HOM05D006243 ORTHO05D007688 3.5e-67 259.2 160 83.1
Thhalv10018612m.g Eutrema salsugineum HOM05D006243 ORTHO05D007688 6.0e-67 258.5 178 75.8
Sed0013436 Sechium edule HOM05D006243 ORTHO05D007688 9.0e-63 244.6 185 69.7
Pp3c16_1710 Physcomitrium patens HOM05D006243 ORTHO05D007688 9.3e-52 208.0 243 47.3
Mapoly0055s0114 Marchantia polymorpha HOM05D006243 ORTHO05D007688 1.6e-51 207.2 259 45.9
Pp3c5_8230 Physcomitrium patens HOM05D006243 ORTHO05D007688 3.5e-51 206.1 231 50.2
AagrBONN_evm.TU.Sc2ySwM_117.2468 Anthoceros agrestis HOM05D006243 ORTHO05D007688 1.8e-50 203.8 243 45.7
VMungo0647G1521 Vigna mungo HOM05D006243 ORTHO05D007688 3.9e-50 202.6 128 81.2
Pp3c25_7980 Physcomitrium patens HOM05D006243 ORTHO05D007688 8.7e-50 201.4 248 47.2
Psat2g047960 Pisum sativum HOM05D006243 ORTHO05D007688 1.4e-47 194.1 154 67.5
SMO238G0021 Selaginella moellendorffii HOM05D006243 ORTHO05D007688 3.5e-43 179.5 272 40.4
VMungo0647G1427 Vigna mungo HOM05D006243 ORTHO05D007688 1.9e-36 157.1 160 56.2
Lsat_1_v5_gn_2_20381 Lactuca sativa HOM05D006243 ORTHO05D007688 9.3e-36 154.8 109 74.3
CBR_g27960 Chara braunii HOM05D006243 ORTHO05D007688 1.6e-32 144.1 229 38.4
RcHm_v2.0_Chr7g0216651 Rosa chinensis HOM05D006243 ORTHO05D007688 6.9e-31 138.7 77 93.5
Dinv28209 Davidia involucrata HOM05D006243 ORTHO05D007688 2.2e-29 133.7 81 84.0
Lsat_1_v5_gn_9_50281 Lactuca sativa HOM05D006243 ORTHO05D007688 2.3e-18 97.1 60 80.0
Lsat_1_v5_gn_9_64341 Lactuca sativa HOM05D000326 ORTHO05D000312 4.7e-11 72.8 101 47.5
QL02p058075 Quercus lobata HOM05D006243 ORTHO05D007688 8.0e-11 72.0 44 79.5
Actinidia17214 Actinidia chinensis HOM05D006243 ORTHO05D007688 3.3e-09 66.6 72 51.4


User provided reference genes

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