Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund13091 Selenicereus undatus HOM05D003263 ORTHO05D004801 2.7e-45 184.9 88 100.0
Dinv28178 Davidia involucrata HOM05D003263 ORTHO05D004801 1.4e-30 136.0 105 63.8
Hund13092 Selenicereus undatus HOM05D003263 ORTHO05D004801 5.5e-30 134.0 105 64.8
arahy.Tifrunner.gnm1.ann1.AUXW6G Arachis hypogaea HOM05D003263 ORTHO05D004801 7.1e-30 133.7 105 63.8
TAR629G0765 Trochodendron aralioides HOM05D003263 ORTHO05D004801 7.1e-30 133.7 105 63.8
CANSAT56G4352 Cannabis sativa HOM05D003263 ORTHO05D004801 1.2e-29 132.9 105 62.9
Gohir.A07G170100 Gossypium hirsutum HOM05D003263 ORTHO05D004801 1.2e-29 132.9 105 63.8
Gohir.D07G176300 Gossypium hirsutum HOM05D003263 ORTHO05D004801 1.2e-29 132.9 105 63.8
Gorai.001G197100 Gossypium raimondii HOM05D003263 ORTHO05D004801 1.2e-29 132.9 105 63.8
PGR042G3530 Punica granatum HOM05D003263 ORTHO05D004801 1.2e-29 132.9 105 62.9
Cpa.g.sc116.77 Carica papaya HOM05D003263 ORTHO05D004801 1.6e-29 132.5 105 62.9
Ca_17086_v3 Cicer arietinum L. HOM05D003263 ORTHO05D004801 1.6e-29 132.5 105 62.9
ClCG05G010610 Citrullus lanatus HOM05D003263 ORTHO05D004801 1.6e-29 132.5 105 62.9
Ciclev10019002m.g Citrus clementina HOM05D003263 ORTHO05D004801 1.6e-29 132.5 105 62.9
COL.COLO4_13315 Corchorus olitorius HOM05D003263 ORTHO05D004801 1.6e-29 132.5 105 62.9
DCAR_014159 Daucus carota HOM05D003263 ORTHO05D004801 1.6e-29 132.5 105 62.9
Dinv19049 Davidia involucrata HOM05D003263 ORTHO05D004801 1.6e-29 132.5 105 62.9
Gohir.A07G176600 Gossypium hirsutum HOM05D003263 ORTHO05D004801 1.6e-29 132.5 105 62.9
Gohir.D07G183900 Gossypium hirsutum HOM05D003263 ORTHO05D004801 1.6e-29 132.5 105 62.9
Gorai.001G204300 Gossypium raimondii HOM05D003263 ORTHO05D004801 1.6e-29 132.5 105 62.9
Lj6g0025109 Lotus japonicus HOM05D003263 ORTHO05D004801 1.6e-29 132.5 105 62.9
Nn4g24447 Nelumbo nucifera HOM05D003263 ORTHO05D004801 1.6e-29 132.5 105 62.9
QL02p059434 Quercus lobata HOM05D003263 ORTHO05D004801 1.6e-29 132.5 105 62.9
TWI74G0116 Tripterygium wilfordii HOM05D003263 ORTHO05D004801 1.6e-29 132.5 105 62.9
GSVIVG01030914001 Vitis vinifera HOM05D003263 ORTHO05D004801 1.6e-29 132.5 105 62.9
Aqoxy3G04075 Aquilegia oxysepala HOM05D003263 ORTHO05D004801 2.7e-29 131.7 105 61.9
arahy.Tifrunner.gnm1.ann1.5H82NF Arachis hypogaea HOM05D003263 ORTHO05D004801 2.7e-29 131.7 87 74.7
arahy.Tifrunner.gnm1.ann1.RIP12T Arachis hypogaea HOM05D003263 ORTHO05D004801 2.7e-29 131.7 87 74.7
EL10Ac2g03207 Beta vulgaris HOM05D003263 ORTHO05D004801 2.7e-29 131.7 105 62.9
Duzib133G1400 Durio zibethinus HOM05D003263 ORTHO05D004801 2.7e-29 131.7 105 62.9
Os03g0713400 Oryza sativa ssp. japonica HOM05D003263 ORTHO05D004801 2.7e-29 131.7 105 62.9
Thecc.04G063600 Theobroma cacao HOM05D003263 ORTHO05D004801 2.7e-29 131.7 105 61.9
Zm00001eb216210 Zea mays HOM05D003263 ORTHO05D004801 2.7e-29 131.7 105 62.9
ATR0118G003 Amborella trichopoda HOM05D003263 ORTHO05D004801 3.5e-29 131.3 105 62.9
MELO3C020331.2 Cucumis melo HOM05D003263 ORTHO05D004801 3.5e-29 131.3 105 61.9
CsaV3_3G017880 Cucumis sativus L. HOM05D003263 ORTHO05D004801 3.5e-29 131.3 105 61.9
ECA238G3173 Erigeron canadensis HOM05D003263 ORTHO05D004801 3.5e-29 131.3 105 61.9
FvH4_1g30070 Fragaria vesca HOM05D003263 ORTHO05D004801 3.5e-29 131.3 105 61.9
FAN19G0316 Fragaria x ananassa HOM05D003263 ORTHO05D004801 3.5e-29 131.3 105 61.9
FAN23G0774 Fragaria x ananassa HOM05D003263 ORTHO05D004801 3.5e-29 131.3 105 61.9
FAN26G0816 Fragaria x ananassa HOM05D003263 ORTHO05D004801 3.5e-29 131.3 105 61.9
HanXRQChr07g0191741 Helianthus annuus HOM05D003263 ORTHO05D004801 3.5e-29 131.3 105 61.9
Lsat_1_v5_gn_3_63961 Lactuca sativa HOM05D003263 ORTHO05D004801 3.5e-29 131.3 105 61.9
PSO017G4553 Papaver somniferum HOM05D003263 ORTHO05D004801 3.5e-29 131.3 105 62.9
PSO478G1645 Papaver somniferum HOM05D003263 ORTHO05D004801 3.5e-29 131.3 105 62.9
RcHm_v2.0_Chr3g0491991 Rosa chinensis HOM05D003263 ORTHO05D004801 3.5e-29 131.3 105 61.9
Sed0016313 Sechium edule HOM05D003263 ORTHO05D004801 3.5e-29 131.3 105 61.9
Sc14g0006900 Simmondsia chinensis HOM05D003263 ORTHO05D004801 3.5e-29 131.3 105 61.9
Ah.10g032470 Amaranthus hybridus HOM05D003263 ORTHO05D004801 4.6e-29 131.0 105 62.9
Migut.H02232 Erythranthe guttata HOM05D003263 ORTHO05D004801 4.6e-29 131.0 105 61.9
Phvul.001G229000 Phaseolus vulgaris HOM05D003263 ORTHO05D004801 4.6e-29 131.0 105 61.0
HPP92_020298 Vanilla planifolia HOM05D003263 ORTHO05D004801 4.6e-29 131.0 105 61.9
Zm00001eb055050 Zea mays HOM05D003263 ORTHO05D004801 4.6e-29 131.0 105 61.0
TWI77G0544 Tripterygium wilfordii HOM05D003263 ORTHO05D004801 6.0e-29 130.6 105 61.9
AUR62037782 Chenopodium quinoa HOM05D003263 ORTHO05D004801 7.9e-29 130.2 105 62.9
Glyma.11G214800 Glycine max HOM05D003263 ORTHO05D004801 7.9e-29 130.2 105 61.0
MD09G1268900 Malus domestica HOM05D003263 ORTHO05D004801 7.9e-29 130.2 105 61.0
Psat5g119880 Pisum sativum HOM05D003263 ORTHO05D004801 7.9e-29 130.2 105 61.0
Prupe.3G165400 Prunus persica HOM05D003263 ORTHO05D004801 7.9e-29 130.2 105 61.0
VMungo1383G2082 Vigna mungo HOM05D003263 ORTHO05D004801 7.9e-29 130.2 105 61.0
Atru.chr1.2038 Acer truncatum HOM05D003263 ORTHO05D004801 1.0e-28 129.8 105 61.0
AUR62042225 Chenopodium quinoa HOM05D003263 ORTHO05D004801 1.0e-28 129.8 105 61.9
Eucgr.J01621 Eucalyptus grandis HOM05D003263 ORTHO05D004801 1.0e-28 129.8 105 61.0
MD17G1267300 Malus domestica HOM05D003263 ORTHO05D004801 1.0e-28 129.8 105 60.0
Sed0005557 Sechium edule HOM05D003263 ORTHO05D004801 1.0e-28 129.8 105 61.0
THA.LOC104822242 Tarenaya hassleriana HOM05D003263 ORTHO05D004801 1.0e-28 129.8 105 61.9
MSTRG.3699 Avicennia marina HOM05D003263 ORTHO05D004801 1.3e-28 129.4 105 62.9
CSS0018871 Camellia sinensis var. sinensis HOM05D003263 ORTHO05D004801 1.3e-28 129.4 105 62.9
Lalb_Chr18g0053541 Lupinus albus HOM05D003263 ORTHO05D004801 1.3e-28 129.4 105 61.9
Oeu030292.1 Olea europaea HOM05D003263 ORTHO05D004801 1.3e-28 129.4 105 62.9
vmacro18524 Vaccinium macrocarpon HOM05D003263 ORTHO05D004801 1.3e-28 129.4 105 62.9
Actinidia35722 Actinidia chinensis HOM05D003263 ORTHO05D004801 1.8e-28 129.0 105 61.9
MSTRG.15657 Avicennia marina HOM05D003263 ORTHO05D004801 1.8e-28 129.0 105 61.9
CDE05G1320 Ceratophyllum demersum HOM05D003263 ORTHO05D004801 1.8e-28 129.0 105 61.9
Medtr3g065130 Medicago truncatula HOM05D003263 ORTHO05D004801 1.8e-28 129.0 105 61.0
Potri.004G082800 Populus trichocarpa HOM05D003263 ORTHO05D004801 1.8e-28 129.0 105 60.0
TPR.G23206 Trifolium pratense HOM05D003263 ORTHO05D004801 1.8e-28 129.0 105 61.0
CiPaw.03G074100 Carya illinoinensis HOM05D003263 ORTHO05D004801 2.3e-28 128.6 105 61.9
Glyma.18G041700 Glycine max HOM05D003263 ORTHO05D004801 2.3e-28 128.6 105 60.0
HanXRQChr14g0444641 Helianthus annuus HOM05D003263 ORTHO05D004801 2.3e-28 128.6 105 60.0
CARHR215400 Cardamine hirsuta HOM05D003263 ORTHO05D004801 3.0e-28 128.3 105 61.0
Cfa007786 Carpinus fangiana HOM05D003263 ORTHO05D004801 3.0e-28 128.3 105 61.9
Cc07_g13220 Coffea canephora HOM05D003263 ORTHO05D004801 3.0e-28 128.3 105 61.9
Rhsim08G0019700 Rhododendron simsii HOM05D003263 ORTHO05D004801 3.0e-28 128.3 105 61.9
SpUN1596_0010 Schrenkiella parvula HOM05D003263 ORTHO05D004801 3.0e-28 128.3 105 61.9
THA.LOC104805635 Tarenaya hassleriana HOM05D003263 ORTHO05D004801 3.0e-28 128.3 105 61.0
CAN.G222.62 Capsicum annuum HOM05D003263 ORTHO05D004801 3.9e-28 127.9 105 61.0
Manes.02G078500 Manihot esculenta HOM05D003263 ORTHO05D004801 3.9e-28 127.9 105 61.0
Nitab4.5_0006562g0010 Nicotiana tabacum HOM05D003263 ORTHO05D004801 3.9e-28 127.9 105 61.0
Nitab4.5_0011135g0010 Nicotiana tabacum HOM05D003263 ORTHO05D004801 3.9e-28 127.9 105 61.0
Peaxi162Scf00464g00325 Petunia axillaris HOM05D003263 ORTHO05D004801 3.9e-28 127.9 105 61.0
Potri.017G136133 Populus trichocarpa HOM05D003263 ORTHO05D004801 3.9e-28 127.9 105 60.0
SalBow5G3125 Salvia bowleyana HOM05D003263 ORTHO05D004801 3.9e-28 127.9 105 61.0
Solyc11g011470.2 Solanum lycopersicum HOM05D003263 ORTHO05D004801 3.9e-28 127.9 105 61.0
Sopen11g006260 Solanum pennellii HOM05D003263 ORTHO05D004801 3.9e-28 127.9 105 61.0
PGSC0003DMG400013309 Solanum tuberosum HOM05D003263 ORTHO05D004801 3.9e-28 127.9 105 61.0
AL1G43210 Arabidopsis lyrata HOM05D003263 ORTHO05D004801 5.1e-28 127.5 105 61.9
Migut.K00926 Erythranthe guttata HOM05D003263 ORTHO05D004801 5.1e-28 127.5 105 61.9
Ah.10g032480 Amaranthus hybridus HOM05D003263 ORTHO05D004801 6.7e-28 127.1 105 61.0
Haze_14285 Corylus avellana HOM05D003263 ORTHO05D004801 6.7e-28 127.1 105 61.0
SGA_v2.0_scaffold108G30966 Striga asiatica HOM05D003263 ORTHO05D004801 6.7e-28 127.1 105 61.0
AL7G46270 Arabidopsis lyrata HOM05D003263 ORTHO05D004801 8.7e-28 126.7 105 60.0
AT5G37510 Arabidopsis thaliana HOM05D003263 ORTHO05D004801 8.7e-28 126.7 105 60.0
BcaB06g27086 Brassica carinata HOM05D003263 ORTHO05D004801 8.7e-28 126.7 105 61.0
BcaC02g09578 Brassica carinata HOM05D003263 ORTHO05D004801 8.7e-28 126.7 105 61.0
A04p10660 Brassica napus HOM05D003263 ORTHO05D004801 8.7e-28 126.7 105 61.0
C04p44380 Brassica napus HOM05D003263 ORTHO05D004801 8.7e-28 126.7 105 61.0
BolC4t26009H Brassica oleracea HOM05D003263 ORTHO05D004801 8.7e-28 126.7 105 61.0
BraA04t16733Z Brassica rapa HOM05D003263 ORTHO05D004801 8.7e-28 126.7 105 61.0
Carub.0007s3268 Capsella rubella HOM05D003263 ORTHO05D004801 8.7e-28 126.7 105 60.0
Duzib138G0925 Durio zibethinus HOM05D003263 ORTHO05D004801 8.7e-28 126.7 105 61.0
Thhalv10027640m.g Eutrema salsugineum HOM05D003263 ORTHO05D004801 8.7e-28 126.7 105 61.0
SGA_v2.0_scaffold2G00947 Striga asiatica HOM05D003263 ORTHO05D004801 8.7e-28 126.7 105 60.0
unitig_748.g8633 Utricularia gibba HOM05D003263 ORTHO05D004801 8.7e-28 126.7 105 60.0
Aa31LG9G17520 Aethionema arabicum HOM05D003263 ORTHO05D004801 1.9e-27 125.6 105 61.0
Aa31LG9G17530 Aethionema arabicum HOM05D003263 ORTHO05D004801 1.9e-27 125.6 105 61.0
SHI30113 Sapria himalayana HOM05D003263 ORTHO05D004801 3.3e-27 124.8 105 60.0
SMO331G0029 Selaginella moellendorffii HOM05D003263 ORTHO05D004801 1.4e-25 119.4 105 55.2
arahy.Tifrunner.gnm1.ann1.Z93KCA Arachis hypogaea HOM05D003263 ORTHO05D004801 2.4e-25 118.6 122 54.1
AagrBONN_evm.TU.Sc2ySwM_228.2430 Anthoceros agrestis HOM05D003263 ORTHO05D004801 1.2e-24 116.3 105 57.1
Mapoly0153s0030 Marchantia polymorpha HOM05D003263 ORTHO05D004801 2.0e-24 115.5 105 55.2
arahy.Tifrunner.gnm1.ann1.ZZ0CH2 Arachis hypogaea HOM05D003263 ORTHO05D004801 1.7e-23 112.5 149 45.0
Pp3c19_19270 Physcomitrium patens HOM05D003263 ORTHO05D004801 2.5e-22 108.6 105 52.4
Pp3c1_34100 Physcomitrium patens HOM05D003263 ORTHO05D004801 7.1e-22 107.1 105 51.4
Pp3c1_34110 Physcomitrium patens HOM05D003263 ORTHO05D004801 7.1e-22 107.1 105 51.4
Pp3c1_34140 Physcomitrium patens HOM05D003263 ORTHO05D004801 7.1e-22 107.1 105 51.4
Lalb_Chr15g0085021 Lupinus albus HOM05D003263 ORTHO05D004801 2.1e-21 105.5 60 78.3
CBR_g6354 Chara braunii HOM05D003263 ORTHO05D004801 1.0e-20 103.2 103 48.5
Cre12.g535950 Chlamydomonas reinhardtii HOM05D003263 ORTHO05D004801 1.3e-20 102.8 103 52.4
Manes.01G120700 Manihot esculenta HOM05D003263 ORTHO05D004801 3.9e-20 101.3 60 76.7
PRCOL_00000346 Prasinoderma coloniale HOM05D003263 ORTHO05D004801 2.5e-19 98.6 104 47.1
MCO08G340 Micromonas commoda HOM05D003263 ORTHO05D004801 5.7e-19 97.4 103 48.5
CDE05G1041 Ceratophyllum demersum HOM05D003263 ORTHO05D004801 3.7e-18 94.7 87 57.5
Cfa025667 Carpinus fangiana HOM05D003263 ORTHO05D004801 1.4e-17 92.8 103 45.6
Oeu062704.1 Olea europaea HOM05D003263 ORTHO05D004801 5.3e-17 90.9 83 57.8
MBI19_g09384_MAGBIO Magnolia biondii HOM05D003263 ORTHO05D004801 6.9e-17 90.5 84 57.1
TAR371G0371 Trochodendron aralioides HOM05D003263 ORTHO05D004801 7.7e-16 87.0 87 56.3
MD16G1264300 Malus domestica HOM05D003263 ORTHO05D004801 7.2e-14 80.5 52 65.4
Ca_19082_v3 Cicer arietinum L. HOM05D003263 ORTHO05D004801 4.6e-13 77.8 83 49.4
Hma1.2p1_1425F.1_g282850 Hydrangea macrophylla HOM05D003263 ORTHO05D004801 1.8e-12 75.9 65 60.0
Haze_26802 Corylus avellana HOM05D003263 ORTHO05D004801 1.7e-10 69.3 105 39.0
TPR.G18971 Trifolium pratense HOM05D003263 ORTHO05D004801 3.7e-10 68.2 52 59.6
Thecc.K0008100 Theobroma cacao HOM05D003263 ORTHO05D004801 1.0e-07 60.1 61 54.1
TPR.G11234 Trifolium pratense HOM05D003263 ORTHO05D004801 8.5e-07 57.0 42 61.9


User provided reference genes

Program Settings