Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund13079 Selenicereus undatus HOM05D002544 ORTHO05D007856 2.3e-182 642.1 327 100.0
EL10Ac2g03312 Beta vulgaris HOM05D002544 ORTHO05D007856 2.3e-110 402.9 349 60.2
AUR62037665 Chenopodium quinoa HOM05D002544 ORTHO05D007856 2.6e-109 399.4 355 60.0
AUR62040737 Chenopodium quinoa HOM05D002544 ORTHO05D007856 5.8e-109 398.3 355 59.7
Sc04g0005080 Simmondsia chinensis HOM05D002544 ORTHO05D007856 5.6e-104 381.7 355 57.5
Ah.10g032440 Amaranthus hybridus HOM05D002544 ORTHO05D007856 1.8e-102 376.7 386 54.7
Prupe.3G165300 Prunus persica HOM05D002544 ORTHO05D007856 3.9e-97 359.0 357 53.2
Atru.chr1.2033 Acer truncatum HOM05D002544 ORTHO05D007856 3.6e-95 352.4 355 52.4
Dinv19050 Davidia involucrata HOM05D002544 ORTHO05D007856 1.1e-94 350.9 355 53.8
Hma1.2p1_0158F.1_g070010 Hydrangea macrophylla HOM05D002544 ORTHO05D007856 1.4e-94 350.5 354 54.8
TAR622G0658 Trochodendron aralioides HOM05D002544 ORTHO05D007856 1.8e-94 350.1 355 54.9
Manes.02G078600 Manihot esculenta HOM05D002544 ORTHO05D007856 8.9e-94 347.8 355 52.1
Potri.004G082900 Populus trichocarpa HOM05D002544 ORTHO05D007856 2.0e-93 346.7 355 53.5
CSS0008925 Camellia sinensis var. sinensis HOM05D002544 ORTHO05D007856 4.4e-93 345.5 355 53.0
CSS0046327 Camellia sinensis var. sinensis HOM05D002544 ORTHO05D007856 4.4e-93 345.5 355 53.0
vmacro20587 Vaccinium macrocarpon HOM05D002544 ORTHO05D007856 5.8e-93 345.1 356 53.4
Lj4A258G27 Lonicera japonica HOM05D002544 ORTHO05D007856 9.9e-93 344.4 355 54.1
Duzib128G1814 Durio zibethinus HOM05D002544 ORTHO05D007856 2.2e-92 343.2 355 52.1
Haze_14286 Corylus avellana HOM05D002544 ORTHO05D007856 2.9e-92 342.8 340 54.1
MD17G1267200 Malus domestica HOM05D002544 ORTHO05D007856 4.9e-92 342.0 356 52.0
FAN26G1528 Fragaria x ananassa HOM05D002544 ORTHO05D007856 6.4e-92 341.7 355 51.3
COL.COLO4_38545 Corchorus olitorius HOM05D002544 ORTHO05D007856 8.4e-92 341.3 355 51.0
Actinidia06481 Actinidia chinensis HOM05D002544 ORTHO05D007856 1.9e-91 340.1 355 51.8
Lj6g0017134 Lotus japonicus HOM05D002544 ORTHO05D007856 1.9e-91 340.1 355 51.8
Actinidia17196 Actinidia chinensis HOM05D002544 ORTHO05D007856 4.2e-91 339.0 355 51.8
Glyma.18G041900 Glycine max HOM05D002544 ORTHO05D007856 7.1e-91 338.2 355 50.7
FAN19G2740 Fragaria x ananassa HOM05D002544 ORTHO05D007856 2.7e-90 336.3 355 50.4
GSVIVG01030701001 Vitis vinifera HOM05D002544 ORTHO05D007856 2.7e-90 336.3 355 54.1
FvH4_1g30060 Fragaria vesca HOM05D002544 ORTHO05D007856 6.0e-90 335.1 355 50.4
QL03p020295 Quercus lobata HOM05D002544 ORTHO05D007856 6.0e-90 335.1 354 51.7
VMungo1383G1931 Vigna mungo HOM05D002544 ORTHO05D007856 7.8e-90 334.7 355 50.4
CiPaw.03G074200 Carya illinoinensis HOM05D002544 ORTHO05D007856 1.0e-89 334.3 354 50.6
RcHm_v2.0_Chr3g0492061 Rosa chinensis HOM05D002544 ORTHO05D007856 1.0e-89 334.3 355 49.9
Thecc.10G105700 Theobroma cacao HOM05D002544 ORTHO05D007856 1.0e-89 334.3 355 51.8
Ca_17085_v3 Cicer arietinum L. HOM05D002544 ORTHO05D007856 1.3e-89 334.0 355 51.0
Rhsim10G0180300 Rhododendron simsii HOM05D002544 ORTHO05D007856 1.3e-89 334.0 355 52.1
DCAR_014158 Daucus carota HOM05D002544 ORTHO05D007856 1.7e-89 333.6 355 52.1
Eucgr.F02879 Eucalyptus grandis HOM05D002544 ORTHO05D007856 1.7e-89 333.6 355 51.5
Glyma.11G214700 Glycine max HOM05D002544 ORTHO05D007856 1.7e-89 333.6 355 50.1
Oeu030291.2 Olea europaea HOM05D002544 ORTHO05D007856 2.3e-89 333.2 355 53.0
TWI53G0412 Tripterygium wilfordii HOM05D002544 ORTHO05D007856 3.0e-89 332.8 355 51.8
Gohir.D05G289100 Gossypium hirsutum HOM05D002544 ORTHO05D007856 1.9e-88 330.1 355 50.4
Peaxi162Scf00464g00433 Petunia axillaris HOM05D002544 ORTHO05D007856 1.9e-88 330.1 355 53.0
Ciclev10000514m.g Citrus clementina HOM05D002544 ORTHO05D007856 3.3e-88 329.3 355 49.9
Hma1.2p1_0158F.1_g070020 Hydrangea macrophylla HOM05D002544 ORTHO05D007856 3.3e-88 329.3 330 55.2
Phvul.001G228700 Phaseolus vulgaris HOM05D002544 ORTHO05D007856 4.3e-88 328.9 355 49.3
Gorai.009G304200 Gossypium raimondii HOM05D002544 ORTHO05D007856 2.8e-87 326.2 355 50.1
CANSAT25G3407 Cannabis sativa HOM05D002544 ORTHO05D007856 3.6e-87 325.9 355 50.1
Migut.K00933 Erythranthe guttata HOM05D002544 ORTHO05D007856 3.6e-87 325.9 355 51.3
TPR.G23205 Trifolium pratense HOM05D002544 ORTHO05D007856 1.1e-86 324.3 359 49.6
Gohir.A05G287900 Gossypium hirsutum HOM05D002544 ORTHO05D007856 2.4e-86 323.2 355 49.6
arahy.Tifrunner.gnm1.ann1.5E142I Arachis hypogaea HOM05D002544 ORTHO05D007856 4.0e-86 322.4 356 50.6
arahy.Tifrunner.gnm1.ann1.644H52 Arachis hypogaea HOM05D002544 ORTHO05D007856 4.0e-86 322.4 356 50.3
Medtr3g065110 Medicago truncatula HOM05D002544 ORTHO05D007856 4.0e-86 322.4 355 49.3
Carub.0005s1906 Capsella rubella HOM05D002544 ORTHO05D007856 5.3e-86 322.0 356 50.8
Nn3g18419 Nelumbo nucifera HOM05D002544 ORTHO05D007856 1.5e-85 320.5 355 50.4
PGSC0003DMG400013310 Solanum tuberosum HOM05D002544 ORTHO05D007856 2.0e-85 320.1 355 51.3
CAN.G222.63 Capsicum annuum HOM05D002544 ORTHO05D007856 2.6e-85 319.7 355 50.7
A04p06810 Brassica napus HOM05D002544 ORTHO05D007856 3.4e-85 319.3 356 50.0
Lalb_Chr18g0053551 Lupinus albus HOM05D002544 ORTHO05D007856 3.4e-85 319.3 356 49.7
Cc07_g13210 Coffea canephora HOM05D002544 ORTHO05D007856 7.6e-85 318.2 355 48.7
Thhalv10010197m.g Eutrema salsugineum HOM05D002544 ORTHO05D007856 1.3e-84 317.4 356 49.7
AL5G33420 Arabidopsis lyrata HOM05D002544 ORTHO05D007856 1.7e-84 317.0 356 49.7
AT3G52640 Arabidopsis thaliana HOM05D002544 ORTHO05D007856 1.7e-84 317.0 356 49.7
PGR004G1819 Punica granatum HOM05D002544 ORTHO05D007856 1.7e-84 317.0 355 48.2
QL02p059469 Quercus lobata HOM05D002544 ORTHO05D007856 1.7e-84 317.0 311 54.3
Solyc11g011480.2 Solanum lycopersicum HOM05D002544 ORTHO05D007856 1.7e-84 317.0 355 51.3
PSO063G6024 Papaver somniferum HOM05D002544 ORTHO05D007856 2.9e-84 316.2 355 49.3
CsaV3_3G017820 Cucumis sativus L. HOM05D002544 ORTHO05D007856 3.8e-84 315.8 354 49.2
Sed0025118 Sechium edule HOM05D002544 ORTHO05D007856 4.9e-84 315.5 354 49.2
Cfa007785 Carpinus fangiana HOM05D002544 ORTHO05D007856 8.4e-84 314.7 340 51.8
ClCG05G010690 Citrullus lanatus HOM05D002544 ORTHO05D007856 8.4e-84 314.7 354 48.3
Sopen11g006270 Solanum pennellii HOM05D002544 ORTHO05D007856 8.4e-84 314.7 355 50.7
Sabra04G0055200 Salix brachista HOM05D002544 ORTHO05D007856 1.1e-83 314.3 393 46.8
PSO782G4267 Papaver somniferum HOM05D002544 ORTHO05D007856 1.4e-83 313.9 355 49.3
Sp5g09650 Schrenkiella parvula HOM05D002544 ORTHO05D007856 1.4e-83 313.9 356 49.2
CARHR162460 Cardamine hirsuta HOM05D002544 ORTHO05D007856 3.2e-83 312.8 356 49.2
SGA_v2.0_scaffold45G17141 Striga asiatica HOM05D002544 ORTHO05D007277 4.2e-83 312.4 357 49.6
Nitab4.5_0011135g0020 Nicotiana tabacum HOM05D002544 ORTHO05D007856 2.1e-82 310.1 355 49.6
FAN28G1090 Fragaria x ananassa HOM05D002544 ORTHO05D007856 6.0e-82 308.5 347 49.3
Aa31LG10G7700 Aethionema arabicum HOM05D002544 ORTHO05D007856 1.0e-81 307.8 381 45.7
BraA04t16380Z Brassica rapa HOM05D002544 ORTHO05D007856 1.0e-81 307.8 382 46.3
BcaB02g08559 Brassica carinata HOM05D002544 ORTHO05D007856 1.5e-80 303.9 356 48.6
Aqoxy3G04067 Aquilegia oxysepala HOM05D002544 ORTHO05D007856 1.9e-80 303.5 355 48.7
C04p40360 Brassica napus HOM05D002544 ORTHO05D007856 7.3e-80 301.6 356 48.6
ECA236G0457 Erigeron canadensis HOM05D002544 ORTHO05D007856 2.1e-79 300.1 335 51.3
BcaC02g09234 Brassica carinata HOM05D002544 ORTHO05D007856 2.8e-79 299.7 361 47.6
Lsat_1_v5_gn_3_63981 Lactuca sativa HOM05D002544 ORTHO05D007856 1.4e-78 297.4 333 51.4
unitig_748.g8462 Utricularia gibba HOM05D002544 ORTHO05D007856 1.2e-77 294.3 355 48.2
Os02g0736500 Oryza sativa ssp. japonica HOM05D002544 ORTHO05D007856 2.0e-77 293.5 355 46.8
MBI13_g24909_MAGBIO Magnolia biondii HOM05D002544 ORTHO05D007856 7.6e-77 291.6 355 46.5
ATR0118G015 Amborella trichopoda HOM05D002544 ORTHO05D007856 1.3e-76 290.8 356 47.5
Zm00001eb190390 Zea mays HOM05D002544 ORTHO05D007856 2.2e-76 290.0 355 46.5
BolC4t25616H Brassica oleracea HOM05D002544 ORTHO05D007856 6.4e-76 288.5 386 44.6
Nitab4.5_0006562g0020 Nicotiana tabacum HOM05D002544 ORTHO05D007856 1.1e-75 287.7 359 47.4
HPP92_026943 Vanilla planifolia HOM05D002544 ORTHO05D007856 1.1e-75 287.7 354 44.6
Lj4C412G0 Lonicera japonica HOM05D002544 ORTHO05D007856 2.4e-75 286.6 371 45.8
HanXRQChr16g0532811 Helianthus annuus HOM05D002544 ORTHO05D007856 5.4e-75 285.4 356 46.9
SHI30114 Sapria himalayana HOM05D002544 ORTHO05D007856 3.5e-74 282.7 358 46.9
THA.LOC104805637 Tarenaya hassleriana HOM05D002544 ORTHO05D007856 1.1e-72 277.7 237 58.6
CDE05G1209 Ceratophyllum demersum HOM05D002544 ORTHO05D007856 1.6e-66 257.3 355 44.5
SEGI_34556 Sequoiadendron giganteum HOM05D002544 ORTHO05D007856 9.6e-64 248.1 313 44.4
Cpa.g.sc116.76 Carica papaya HOM05D002544 ORTHO05D007856 2.5e-59 233.4 266 50.8
Psat5g119600 Pisum sativum HOM05D002544 ORTHO05D007856 1.8e-57 227.3 267 49.1
Mapoly0182s0008 Marchantia polymorpha HOM05D002544 ORTHO05D007856 1.4e-54 217.6 373 37.3
SMO115G0276 Selaginella moellendorffii HOM05D002544 ORTHO05D007856 2.6e-53 213.4 352 38.6
AagrBONN_evm.TU.Sc2ySwM_228.3612 Anthoceros agrestis HOM05D002544 ORTHO05D007856 1.2e-42 177.9 384 33.9
CBR_g26303 Chara braunii HOM05D002544 ORTHO05D000002 2.1e-26 124.0 333 27.6
Pp3c25_11440 Physcomitrium patens HOM05D002544 ORTHO05D007856 2.4e-22 110.5 270 31.9
Cre06.g294400 Chlamydomonas reinhardtii HOM05D002544 ORTHO05D007856 6.3e-15 85.9 374 27.0
Haze_22892 Corylus avellana HOM05D002544 ORTHO05D007856 2.8e-10 70.5 102 37.3
Hma1.2p1_0594F.1_g185860 Hydrangea macrophylla HOM05D006828 ORTHO05D008312 1.0e-09 68.6 72 50.0
HPP92_021312 Vanilla planifolia HOM05D002544 ORTHO05D007856 3.0e-09 67.0 96 42.7
C04p40260 Brassica napus HOM05D002544 ORTHO05D007856 5.2e-09 66.2 62 46.8
BolC4t25605H Brassica oleracea HOM05D002544 ORTHO05D007856 5.2e-09 66.2 62 46.8


User provided reference genes

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