Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund12985 Selenicereus undatus HOM05D003347 ORTHO05D003821 2.9e-119 432.6 338 100.0
Sc03g0004210 Simmondsia chinensis HOM05D003347 ORTHO05D003821 9.1e-25 118.6 344 50.6
CDE08G0312 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 3.6e-21 106.7 262 49.6
AUR62014268 Chenopodium quinoa HOM05D003347 ORTHO05D003821 1.4e-20 104.8 177 54.8
TWI14G1287 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 7.5e-19 99.0 354 45.5
AUR62042720 Chenopodium quinoa HOM05D003347 ORTHO05D003821 1.3e-18 98.2 301 48.5
PSO063G2612 Papaver somniferum HOM05D003347 ORTHO05D003821 1.7e-18 97.8 266 42.5
Atru.chr6.636 Acer truncatum HOM05D003347 ORTHO05D003821 3.7e-18 96.7 105 65.7
Lj6g0014149 Lotus japonicus HOM05D003347 ORTHO05D003821 3.1e-17 93.6 195 41.5
TAR628G0882 Trochodendron aralioides HOM05D003347 ORTHO05D003821 7.0e-17 92.4 104 57.7
EL10Ac6g14071 Beta vulgaris HOM05D003347 ORTHO05D003821 1.0e-15 88.6 177 56.5
CDE06G2684 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 2.9e-15 87.0 106 52.8
Medtr2g007150 Medicago truncatula HOM05D003347 ORTHO05D003821 2.9e-15 87.0 104 58.7
Oeu008894.1 Olea europaea HOM05D003347 ORTHO05D003821 3.8e-15 86.7 231 49.4
Oeu008895.1 Olea europaea HOM05D003347 ORTHO05D003821 3.8e-15 86.7 231 49.4
TAR376G0009 Trochodendron aralioides HOM05D003347 ORTHO05D003821 1.5e-14 84.7 339 39.5
HanXRQChr03g0071751 Helianthus annuus HOM05D003347 ORTHO05D003821 1.9e-14 84.3 106 53.8
Phvul.006G214600 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 1.9e-14 84.3 164 47.0
HPP92_009365 Vanilla planifolia HOM05D003347 ORTHO05D003821 1.9e-14 84.3 104 56.7
CDE06G2842 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 2.5e-14 84.0 100 55.0
Zm00001eb113690 Zea mays HOM05D003347 ORTHO05D003821 2.5e-14 84.0 103 50.5
Lj9C306T9 Lonicera japonica HOM05D003347 ORTHO05D003821 3.3e-14 83.6 70 71.4
Dinv24283 Davidia involucrata HOM05D003347 ORTHO05D003821 4.2e-14 83.2 141 56.7
QL10p039663 Quercus lobata HOM05D003347 ORTHO05D003821 5.5e-14 82.8 70 65.7
Haze_01671 Corylus avellana HOM05D003347 ORTHO05D003821 9.5e-14 82.0 104 51.9
Oeu033124.1 Olea europaea HOM05D002729 ORTHO05D003163 9.5e-14 82.0 230 49.6
vmacro01761 Vaccinium macrocarpon HOM05D003347 ORTHO05D003821 9.5e-14 82.0 162 40.7
Haze_25385 Corylus avellana HOM05D003347 ORTHO05D003821 1.2e-13 81.6 224 42.9
Hund07201 Selenicereus undatus HOM05D003347 ORTHO05D003821 1.2e-13 81.6 227 43.2
Zm00001eb197610 Zea mays HOM05D003347 ORTHO05D003821 1.2e-13 81.6 103 49.5
Nitab4.5_0000816g0010 Nicotiana tabacum HOM05D003347 ORTHO05D003821 2.1e-13 80.9 206 51.9
Psat1g221480 Pisum sativum HOM05D003347 ORTHO05D003821 2.1e-13 80.9 352 48.6
CSS0030084 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 4.7e-13 79.7 107 59.8
Gorai.012G161200 Gossypium raimondii HOM05D003347 ORTHO05D003821 4.7e-13 79.7 355 42.0
MD15G1423300 Malus domestica HOM05D003347 ORTHO05D003821 4.7e-13 79.7 231 46.8
TWI31G0129 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 4.7e-13 79.7 101 51.5
Actinidia26147 Actinidia chinensis HOM05D003347 ORTHO05D003821 6.1e-13 79.3 205 45.9
MELO3C014381.2 Cucumis melo HOM05D003347 ORTHO05D003821 6.1e-13 79.3 94 63.8
TAR381G0729 Trochodendron aralioides HOM05D003347 ORTHO05D003821 8.0e-13 79.0 178 50.6
Nn5g28237 Nelumbo nucifera HOM05D003347 ORTHO05D003821 1.0e-12 78.6 188 52.7
Hma1.2p1_1197F.1_g266100 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 1.4e-12 78.2 72 65.3
Cc02_g22510 Coffea canephora HOM05D003347 ORTHO05D003821 1.8e-12 77.8 231 47.2
Cfa002207 Carpinus fangiana HOM05D003347 ORTHO05D003821 2.3e-12 77.4 100 57.0
PGR042G0677 Punica granatum HOM05D003347 ORTHO05D003821 2.3e-12 77.4 106 63.2
VMungo0540G0141 Vigna mungo HOM05D003347 ORTHO05D003821 2.3e-12 77.4 193 52.3
Hma1.2p1_0217F.1_g092040 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 3.0e-12 77.0 194 50.5
BolC5t29665H Brassica oleracea HOM05D003347 ORTHO05D003821 5.2e-12 76.3 301 40.5
TWI59G0889 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 5.2e-12 76.3 96 61.5
COL.COLO4_12116 Corchorus olitorius HOM05D012218 ORTHO05D003821 8.9e-12 75.5 67 65.7
Cfa005522 Carpinus fangiana HOM05D003347 ORTHO05D003821 2.0e-11 74.3 105 52.4
CsaV3_6G037360 Cucumis sativus L. HOM05D003347 ORTHO05D003821 2.0e-11 74.3 189 51.3
Aqoxy6G00189 Aquilegia oxysepala HOM05D003347 ORTHO05D003821 3.4e-11 73.6 105 48.6
CSS0039803 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 3.4e-11 73.6 105 55.2
CSS0043936 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 3.4e-11 73.6 105 55.2
Glyma.06G158900 Glycine max HOM05D003347 ORTHO05D003821 4.4e-11 73.2 70 60.0
Duzib132G0710 Durio zibethinus HOM05D003347 ORTHO05D003821 5.7e-11 72.8 196 48.5
Gohir.D04G172100 Gossypium hirsutum HOM05D003347 ORTHO05D003821 5.7e-11 72.8 194 45.4
Lsat_1_v5_gn_9_118960 Lactuca sativa HOM05D003347 ORTHO05D003821 7.5e-11 72.4 70 62.9
Cpa.g.sc37.62 Carica papaya HOM05D003347 ORTHO05D003821 1.7e-10 71.2 70 55.7
Phvul.009G151400 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 1.7e-10 71.2 70 60.0
Atru.chr4.1125 Acer truncatum HOM05D003347 ORTHO05D003821 2.2e-10 70.9 70 55.7
Hma1.2p1_0930F.1_g238020 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 2.8e-10 70.5 91 51.6
C05p09260 Brassica napus HOM05D003347 ORTHO05D003821 6.3e-10 69.3 259 42.5
Gohir.D12G040600 Gossypium hirsutum HOM05D003347 ORTHO05D003821 6.3e-10 69.3 105 57.1
HanXRQChr01g0017031 Helianthus annuus HOM05D003347 ORTHO05D003821 6.3e-10 69.3 69 56.5
Manes.07G015700 Manihot esculenta HOM05D003347 ORTHO05D003821 6.3e-10 69.3 106 56.6
BcaC05g24971 Brassica carinata HOM05D003347 ORTHO05D003821 8.3e-10 68.9 231 43.3
A06p07670 Brassica napus HOM05D003347 ORTHO05D003821 8.3e-10 68.9 272 37.9
TPR.G28695 Trifolium pratense HOM05D003347 ORTHO05D003821 1.1e-09 68.6 70 57.1
Gohir.A04G127400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 1.4e-09 68.2 194 44.3
Lalb_Chr11g0068781 Lupinus albus HOM05D003347 ORTHO05D003821 1.8e-09 67.8 68 57.4
BraA06t23968Z Brassica rapa HOM05D003347 ORTHO05D003821 2.4e-09 67.4 271 37.6
Nitab4.5_0000496g0140 Nicotiana tabacum HOM05D003347 ORTHO05D003821 2.4e-09 67.4 107 52.3
PGSC0003DMG400023323 Solanum tuberosum HOM05D003347 ORTHO05D003821 2.4e-09 67.4 107 56.1
CiPaw.05G044400 Carya illinoinensis HOM05D003347 ORTHO05D003821 3.1e-09 67.0 202 32.7
Solyc05g056460.4 Solanum lycopersicum HOM05D003347 ORTHO05D003821 3.1e-09 67.0 107 57.0
Thhalv10008376m.g Eutrema salsugineum HOM05D003347 ORTHO05D003821 5.4e-09 66.2 104 41.3
PGR102G0439 Punica granatum HOM05D003347 ORTHO05D003821 5.4e-09 66.2 105 45.7
TPR.G2109 Trifolium pratense HOM05D003347 ORTHO05D003821 5.4e-09 66.2 104 50.0
Peaxi162Scf00011g00421 Petunia axillaris HOM05D003347 ORTHO05D003821 7.0e-09 65.9 206 48.5
Psat5g058160 Pisum sativum HOM05D003347 ORTHO05D003821 9.2e-09 65.5 72 48.6
Sed0017913 Sechium edule HOM05D003347 ORTHO05D003821 9.2e-09 65.5 70 57.1
VMungo1309G3119 Vigna mungo HOM05D003347 ORTHO05D003821 9.2e-09 65.5 70 55.7
ATR0684G168 Amborella trichopoda HOM05D003347 ORTHO05D003821 1.2e-08 65.1 105 47.6
CAN.G1577.23 Capsicum annuum HOM05D003347 ORTHO05D003821 1.2e-08 65.1 231 43.3
Gorai.008G042400 Gossypium raimondii HOM05D003347 ORTHO05D003821 1.6e-08 64.7 194 45.9
Lj1g0014274 Lotus japonicus HOM05D003347 ORTHO05D003821 1.6e-08 64.7 70 54.3
GSVIVG01022926001 Vitis vinifera HOM05D003347 ORTHO05D003821 1.6e-08 64.7 105 53.3
Lalb_Chr18g0060901 Lupinus albus HOM05D003347 ORTHO05D003821 2.7e-08 63.9 187 42.2
QL11p018508 Quercus lobata HOM05D003347 ORTHO05D003821 3.5e-08 63.5 70 55.7
Sed0005094 Sechium edule HOM05D003347 ORTHO05D003821 3.5e-08 63.5 192 45.8
arahy.Tifrunner.gnm1.ann1.CXB9HG Arachis hypogaea HOM05D003347 ORTHO05D003821 4.5e-08 63.2 104 48.1
CANSAT11G2200 Cannabis sativa HOM05D003347 ORTHO05D003821 4.5e-08 63.2 105 56.2
AUR62006920 Chenopodium quinoa HOM05D003347 ORTHO05D003821 4.5e-08 63.2 227 40.1
Psat5g058080 Pisum sativum HOM05D003347 ORTHO05D003821 4.5e-08 63.2 74 48.6
EL10Ac4g09689 Beta vulgaris HOM05D003347 ORTHO05D003821 5.9e-08 62.8 72 51.4
SEGI_15810 Sequoiadendron giganteum HOM05D003347 ORTHO05D003821 7.8e-08 62.4 94 53.2
Lj4A831G75 Lonicera japonica HOM05D003347 ORTHO05D003821 1.7e-07 61.2 56 62.5
CiPaw.03G114900 Carya illinoinensis HOM05D003347 ORTHO05D003821 3.8e-07 60.1 105 45.7
Potri.019G001900 Populus trichocarpa HOM05D003347 ORTHO05D003821 5.0e-07 59.7 63 54.0
arahy.Tifrunner.gnm1.ann1.N22SFW Arachis hypogaea HOM05D003347 ORTHO05D003821 6.6e-07 59.3 191 43.5
ClCG09G014210 Citrullus lanatus HOM05D003347 ORTHO05D003821 6.6e-07 59.3 70 52.9
Peaxi162Scf00152g01328 Petunia axillaris HOM05D003347 ORTHO05D003821 6.6e-07 59.3 205 46.3
Carub.0001s1045 Capsella rubella HOM05D003347 ORTHO05D003821 8.6e-07 58.9 98 52.0
THA.LOC104819278 Tarenaya hassleriana HOM05D003347 ORTHO05D003821 8.6e-07 58.9 267 40.1
ECA236G0662 Erigeron canadensis HOM05D003347 ORTHO05D003821 1.5e-06 58.2 70 55.7
Gohir.A12G031700 Gossypium hirsutum HOM05D003347 ORTHO05D003821 1.5e-06 58.2 194 42.8
Mapoly0020s0030 Marchantia polymorpha HOM05D003347 ORTHO05D003821 1.9e-06 57.8 86 65.1
Pp3c15_6590 Physcomitrium patens HOM05D003347 ORTHO05D003821 1.9e-06 57.8 60 53.3
Dinv05136 Davidia involucrata HOM05D000040 ORTHO05D000267 4.3e-06 56.6 105 48.6
CARHR051920 Cardamine hirsuta HOM05D003347 ORTHO05D003821 9.5e-06 55.5 230 31.7
SGA_v2.0_scaffold1G00306 Striga asiatica HOM05D003347 ORTHO05D003821 9.5e-06 55.5 70 54.3
unitig_26.g9555 Utricularia gibba HOM05D003347 ORTHO05D003821 9.5e-06 55.5 89 75.3


User provided reference genes

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