Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund12940 Selenicereus undatus HOM05D006202 ORTHO05D008227 8.1e-171 603.6 292 100.0
AUR62034625 Chenopodium quinoa HOM05D006202 ORTHO05D008227 1.4e-130 469.9 285 78.2
Ah.14g085700 Amaranthus hybridus HOM05D006202 ORTHO05D008227 6.5e-128 461.1 285 78.6
EL10Ac3g06182 Beta vulgaris HOM05D006202 ORTHO05D008227 2.3e-125 452.6 285 76.1
AUR62036652 Chenopodium quinoa HOM05D006202 ORTHO05D008227 7.4e-124 447.6 261 80.8
Dinv43939 Davidia involucrata HOM05D006202 ORTHO05D008227 5.9e-121 438.0 260 80.8
Sc10g0005310 Simmondsia chinensis HOM05D006202 ORTHO05D008227 2.7e-118 429.1 285 74.4
Rhsim03G0068600 Rhododendron simsii HOM05D006202 ORTHO05D008227 6.1e-118 427.9 258 77.1
CSS0029964 Camellia sinensis var. sinensis HOM05D006202 ORTHO05D008227 3.0e-117 425.6 293 70.0
Potri.009G024100 Populus trichocarpa HOM05D006202 ORTHO05D008227 5.1e-117 424.9 269 74.3
QL04p001552 Quercus lobata HOM05D006202 ORTHO05D008227 6.7e-117 424.5 257 77.0
TAR369G1105 Trochodendron aralioides HOM05D006202 ORTHO05D008227 8.8e-117 424.1 260 77.7
Actinidia21584 Actinidia chinensis HOM05D006202 ORTHO05D008227 4.3e-116 421.8 285 70.9
Cfa010710 Carpinus fangiana HOM05D006202 ORTHO05D008227 9.7e-116 420.6 258 76.7
Manes.10G152100 Manihot esculenta HOM05D006202 ORTHO05D008227 3.7e-115 418.7 250 78.0
TAR369G0651 Trochodendron aralioides HOM05D006202 ORTHO05D008227 1.1e-114 417.2 260 76.9
Haze_03268 Corylus avellana HOM05D006202 ORTHO05D008227 2.4e-114 416.0 285 71.6
GSVIVG01001357001 Vitis vinifera HOM05D006202 ORTHO05D008227 5.3e-114 414.8 296 69.3
Prupe.1G561800 Prunus persica HOM05D006202 ORTHO05D008227 6.9e-114 414.5 248 79.0
Lj9C620G10 Lonicera japonica HOM05D006202 ORTHO05D008227 9.1e-114 414.1 234 83.3
TWI73G0821 Tripterygium wilfordii HOM05D006202 ORTHO05D008227 9.1e-114 414.1 242 78.5
Glyma.15G268400 Glycine max HOM05D006202 ORTHO05D008227 1.5e-113 413.3 259 76.1
Nn2g15679 Nelumbo nucifera HOM05D006202 ORTHO05D008227 1.5e-113 413.3 257 76.3
Cpa.g.sc189.4 Carica papaya HOM05D006202 ORTHO05D008227 2.0e-113 412.9 260 75.4
Glyma.08G157800 Glycine max HOM05D006202 ORTHO05D008227 2.2e-112 409.5 265 76.6
RcHm_v2.0_Chr1g0313251 Rosa chinensis HOM05D006202 ORTHO05D008227 2.2e-112 409.5 232 81.0
Lj3g0005275 Lotus japonicus HOM05D006202 ORTHO05D008227 3.8e-112 408.7 286 69.9
Nitab4.5_0000468g0040 Nicotiana tabacum HOM05D006202 ORTHO05D008227 6.5e-112 407.9 247 76.9
arahy.Tifrunner.gnm1.ann1.Y9YBLC Arachis hypogaea HOM05D006202 ORTHO05D008227 8.5e-112 407.5 246 78.5
Sed0014986 Sechium edule HOM05D006202 ORTHO05D008227 1.1e-111 407.1 267 73.8
arahy.Tifrunner.gnm1.ann1.03K86Q Arachis hypogaea HOM05D006202 ORTHO05D008227 1.4e-111 406.8 246 78.0
CiPaw.02G012300 Carya illinoinensis HOM05D006202 ORTHO05D008227 1.4e-111 406.8 240 79.6
vmacro21164 Vaccinium macrocarpon HOM05D006202 ORTHO05D008227 1.4e-111 406.8 234 81.6
ECA234G4350 Erigeron canadensis HOM05D006202 ORTHO05D008227 4.2e-111 405.2 241 79.7
Aa31LG5G5070 Aethionema arabicum HOM05D006202 ORTHO05D008227 5.5e-111 404.8 267 72.3
Aqoxy1G00030 Aquilegia oxysepala HOM05D006202 ORTHO05D008227 5.5e-111 404.8 248 77.0
Cc02_g26930 Coffea canephora HOM05D006202 ORTHO05D008227 7.2e-111 404.4 246 77.6
MD02G1319400 Malus domestica HOM05D006202 ORTHO05D008227 9.4e-111 404.1 247 76.5
Nitab4.5_0010722g0010 Nicotiana tabacum HOM05D006202 ORTHO05D008227 9.4e-111 404.1 247 76.1
MELO3C023505.2 Cucumis melo HOM05D006202 ORTHO05D008227 1.2e-110 403.7 236 80.1
Oeu060701.1 Olea europaea HOM05D006202 ORTHO05D008227 1.6e-110 403.3 241 78.0
Atru.chr11.2704 Acer truncatum HOM05D006202 ORTHO05D008227 2.1e-110 402.9 234 80.3
arahy.Tifrunner.gnm1.ann1.YK6119 Arachis hypogaea HOM05D006202 ORTHO05D008227 1.0e-109 400.6 246 77.2
Sabra09G0015400 Salix brachista HOM05D006202 ORTHO05D008227 1.4e-109 400.2 302 64.9
THA.LOC104815880 Tarenaya hassleriana HOM05D006202 ORTHO05D008227 2.3e-109 399.4 233 79.8
Medtr2g061710 Medicago truncatula HOM05D006202 ORTHO05D008227 3.0e-109 399.1 241 80.1
Lalb_Chr01g0015151 Lupinus albus HOM05D006202 ORTHO05D008227 3.9e-109 398.7 259 72.6
CAN.G129.48 Capsicum annuum HOM05D006202 ORTHO05D008227 5.2e-109 398.3 271 70.8
Eucgr.A00275 Eucalyptus grandis HOM05D006202 ORTHO05D008227 5.2e-109 398.3 267 74.5
Solyc01g073730.4 Solanum lycopersicum HOM05D006202 ORTHO05D008227 5.2e-109 398.3 248 74.2
Sopen01g033340 Solanum pennellii HOM05D006202 ORTHO05D008227 5.2e-109 398.3 248 74.2
TPR.G16148 Trifolium pratense HOM05D006202 ORTHO05D008227 5.2e-109 398.3 230 81.3
FAN04G1730 Fragaria x ananassa HOM05D006202 ORTHO05D008227 8.8e-109 397.5 231 79.7
PSO384G0467 Papaver somniferum HOM05D006202 ORTHO05D008227 1.5e-108 396.7 279 70.6
Psat1g128920 Pisum sativum HOM05D006202 ORTHO05D008227 2.0e-108 396.4 244 77.0
MSTRG.28100 Avicennia marina HOM05D006202 ORTHO05D008227 3.3e-108 395.6 242 76.9
Lsat_1_v5_gn_4_46560 Lactuca sativa HOM05D006202 ORTHO05D008227 3.3e-108 395.6 257 73.9
BcaC01g05926 Brassica carinata HOM05D006202 ORTHO05D008227 4.4e-108 395.2 243 77.4
Carub.0004s1327 Capsella rubella HOM05D006202 ORTHO05D008227 4.4e-108 395.2 260 71.5
DCAR_001807 Daucus carota HOM05D006202 ORTHO05D008227 4.4e-108 395.2 233 79.8
FvH4_5g30330 Fragaria vesca HOM05D006202 ORTHO05D008227 5.7e-108 394.8 231 79.7
ClCG09G003710 Citrullus lanatus HOM05D006202 ORTHO05D008227 7.4e-108 394.4 235 78.3
A03p17940 Brassica napus HOM05D000200 ORTHO05D000262 9.7e-108 394.0 243 77.4
BraA03t11059Z Brassica rapa HOM05D006202 ORTHO05D008227 1.3e-107 393.7 243 77.4
BolC3t14483H Brassica oleracea HOM05D006202 ORTHO05D008227 1.7e-107 393.3 243 77.0
HanXRQChr16g0520351 Helianthus annuus HOM05D006202 ORTHO05D008227 1.7e-107 393.3 242 77.3
FAN18G2168 Fragaria x ananassa HOM05D006202 ORTHO05D008227 2.2e-107 392.9 231 79.2
Peaxi162Scf00402g00616 Petunia axillaris HOM05D006202 ORTHO05D008227 2.2e-107 392.9 232 78.9
PGSC0003DMG401028974 Solanum tuberosum HOM05D006202 ORTHO05D008227 2.2e-107 392.9 234 77.8
AL4G27290 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 2.8e-107 392.5 260 71.2
AL80U10060 Arabidopsis lyrata HOM05D006202 ORTHO05D008227 2.8e-107 392.5 260 71.2
CARHR125690 Cardamine hirsuta HOM05D006202 ORTHO05D008227 2.8e-107 392.5 248 75.0
Eucgr.A00079 Eucalyptus grandis HOM05D006202 ORTHO05D008227 2.8e-107 392.5 247 78.5
AT2G31955 Arabidopsis thaliana HOM05D006202 ORTHO05D008227 3.7e-107 392.1 249 73.9
MBI04_g33961_MAGBIO Magnolia biondii HOM05D006202 ORTHO05D008227 3.7e-107 392.1 236 77.1
COL.COLO4_07529 Corchorus olitorius HOM05D006202 ORTHO05D008227 4.8e-107 391.7 238 77.7
Migut.I00539 Erythranthe guttata HOM05D006202 ORTHO05D008227 4.8e-107 391.7 243 76.1
SGA_v2.0_scaffold5G03106 Striga asiatica HOM05D006202 ORTHO05D008227 4.8e-107 391.7 239 75.7
FAN13G0191 Fragaria x ananassa HOM05D006202 ORTHO05D008227 6.3e-107 391.3 231 79.2
C03p21020 Brassica napus HOM05D000200 ORTHO05D000262 8.2e-107 391.0 241 76.8
FAN08G1924 Fragaria x ananassa HOM05D006202 ORTHO05D008227 8.2e-107 391.0 231 79.2
PSO339G0702 Papaver somniferum HOM05D006202 ORTHO05D008227 8.2e-107 391.0 231 79.2
Phvul.005G042000 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 8.2e-107 391.0 232 78.9
Thecc.09G200100 Theobroma cacao HOM05D006202 ORTHO05D008227 1.1e-106 390.6 236 77.1
Migut.B01400 Erythranthe guttata HOM05D006202 ORTHO05D008227 1.4e-106 390.2 242 76.4
Sp4g14320 Schrenkiella parvula HOM05D006202 ORTHO05D008227 1.4e-106 390.2 221 81.9
Ca_03201_v3 Cicer arietinum L. HOM05D006202 ORTHO05D008227 1.8e-106 389.8 260 73.5
VMungo1080G0924 Vigna mungo HOM05D006202 ORTHO05D008227 2.4e-106 389.4 232 77.6
SalBow5G5675 Salvia bowleyana HOM05D006202 ORTHO05D008227 1.2e-105 387.1 239 76.2
Thhalv10016791m.g Eutrema salsugineum HOM05D006202 ORTHO05D008227 1.6e-105 386.7 247 74.9
ATR0605G327 Amborella trichopoda HOM05D006202 ORTHO05D008227 3.5e-105 385.6 253 73.9
Os12g0507000 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 1.0e-104 384.0 245 71.4
Ciclev10031726m.g Citrus clementina HOM05D006202 ORTHO05D008227 1.3e-104 383.6 251 74.1
Phvul.005G041900 Phaseolus vulgaris HOM05D006202 ORTHO05D008227 2.9e-104 382.5 213 83.6
unitig_749.g13486 Utricularia gibba HOM05D006202 ORTHO05D008227 1.1e-103 380.6 242 73.1
Duzib168G0949 Durio zibethinus HOM05D006202 ORTHO05D008227 4.2e-103 378.6 251 72.1
HPP92_023784 Vanilla planifolia HOM05D006202 ORTHO05D008227 3.6e-102 375.6 251 72.1
Gorai.004G013400 Gossypium raimondii HOM05D006202 ORTHO05D008227 4.7e-102 375.2 242 72.3
Zm00001eb244230 Zea mays HOM05D006202 ORTHO05D008227 4.7e-102 375.2 245 71.8
Gohir.A08G008900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 6.1e-102 374.8 242 71.5
Gohir.D08G018900 Gossypium hirsutum HOM05D006202 ORTHO05D008227 8.0e-102 374.4 219 77.6
Os02g0258900 Oryza sativa ssp. japonica HOM05D006202 ORTHO05D008227 3.0e-101 372.5 231 72.7
CsaV3_7G031490 Cucumis sativus L. HOM05D006202 ORTHO05D008227 6.7e-101 371.3 204 83.8
CANSAT80G0703 Cannabis sativa HOM05D006202 ORTHO05D008227 6.3e-99 364.8 287 63.8
Potri.001G230604 Populus trichocarpa HOM05D006202 ORTHO05D008227 1.0e-93 347.4 241 68.9
Actinidia15848 Actinidia chinensis HOM05D006202 ORTHO05D008227 5.7e-92 341.7 291 60.5
SMO361G0213 Selaginella moellendorffii HOM05D006202 ORTHO05D008227 5.7e-92 341.7 215 73.5
CBR_g36677 Chara braunii HOM05D006202 ORTHO05D008227 9.1e-90 334.3 217 71.0
Pp3c5_22480 Physcomitrium patens HOM05D006202 ORTHO05D008227 5.9e-89 331.6 215 73.5
CDE06G1615 Ceratophyllum demersum HOM05D006202 ORTHO05D008227 5.5e-87 325.1 231 70.1
Mapoly0045s0149 Marchantia polymorpha HOM05D006202 ORTHO05D008227 2.7e-86 322.8 212 71.2
SEGI_40145 Sequoiadendron giganteum HOM05D006202 ORTHO05D008227 1.8e-85 320.1 244 63.9
MCO15G349 Micromonas commoda HOM05D006202 ORTHO05D008227 3.0e-77 292.7 215 63.3
arahy.Tifrunner.gnm1.ann1.JS3HL2 Arachis hypogaea HOM05D006202 ORTHO05D008227 5.7e-76 288.5 232 63.4
SHI12251 Sapria himalayana HOM05D006202 ORTHO05D008227 8.0e-70 268.1 172 74.4
Cre13.g602901 Chlamydomonas reinhardtii HOM05D006202 ORTHO05D008227 1.5e-68 263.8 259 50.2
PRCOL_00002201 Prasinoderma coloniale HOM05D006202 ORTHO05D008227 6.0e-65 251.9 214 54.2
Cfa022704 Carpinus fangiana HOM05D006202 ORTHO05D008227 3.4e-60 236.1 221 51.6
AagrBONN_evm.TU.Sc2ySwM_344.4902 Anthoceros agrestis HOM05D006202 ORTHO05D008227 5.8e-60 235.3 160 69.4
Pp3c6_6420 Physcomitrium patens HOM05D006202 ORTHO05D008227 3.5e-57 226.1 158 68.4
SHI12245 Sapria himalayana HOM05D006202 ORTHO05D008227 1.1e-53 214.5 167 64.7
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 1.9e-47 193.7 187 49.2
ATR0605G108 Amborella trichopoda HOM05D006202 ORTHO05D008227 8.1e-46 188.3 131 71.0
SHI12244 Sapria himalayana HOM05D006202 ORTHO05D008227 1.6e-22 110.9 81 67.9
SHI34064 Sapria himalayana HOM05D006202 ORTHO05D367267 3.7e-14 83.2 59 69.5
A05p13580 Brassica napus HOM05D006202 ORTHO05D033532 6.3e-14 82.4 90 48.9
BraA05t20295Z Brassica rapa HOM05D006202 ORTHO05D033532 6.3e-14 82.4 90 48.9
TAR623G0116 Trochodendron aralioides HOM05D006202 ORTHO05D414173 3.6e-09 66.6 35 82.9


User provided reference genes

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