Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund12783 Selenicereus undatus HOM05D003267 ORTHO05D003955 3.2e-113 411.8 205 100.0
Hund12702 Selenicereus undatus HOM05D003267 ORTHO05D003955 3.1e-44 182.6 145 66.9
EL10Ac6g15325 Beta vulgaris HOM05D003267 ORTHO05D003955 1.8e-39 166.8 138 64.5
AUR62003552 Chenopodium quinoa HOM05D003267 ORTHO05D003955 3.9e-39 165.6 138 64.5
AUR62017866 Chenopodium quinoa HOM05D003267 ORTHO05D003955 1.5e-38 163.7 138 63.8
Dinv24533 Davidia involucrata HOM05D003267 ORTHO05D003955 5.7e-38 161.8 140 62.1
Cfa004400 Carpinus fangiana HOM05D003267 ORTHO05D003955 7.4e-38 161.4 144 61.1
Haze_15005 Corylus avellana HOM05D003267 ORTHO05D003955 7.4e-38 161.4 144 61.1
Dinv30962 Davidia involucrata HOM05D003267 ORTHO05D003955 7.4e-38 161.4 140 62.9
QL03p011428 Quercus lobata HOM05D003267 ORTHO05D003955 9.7e-38 161.0 148 59.5
GSVIVG01005282001 Vitis vinifera HOM05D003267 ORTHO05D003955 9.7e-38 161.0 148 60.1
Actinidia17726 Actinidia chinensis HOM05D003267 ORTHO05D003955 1.3e-37 160.6 148 56.1
Cpa.g.sc19.30 Carica papaya HOM05D003267 ORTHO05D003955 4.8e-37 158.7 148 57.4
Sc23g0003840 Simmondsia chinensis HOM05D003267 ORTHO05D003955 1.1e-36 157.5 144 58.3
TWI12G0658 Tripterygium wilfordii HOM05D003267 ORTHO05D003955 1.1e-36 157.5 140 60.0
MBI18_g03886_MAGBIO Magnolia biondii HOM05D003267 ORTHO05D003955 1.4e-36 157.1 148 58.8
Atru.chr12.1498 Acer truncatum HOM05D003267 ORTHO05D003955 2.4e-36 156.4 148 57.4
Prupe.6G302000 Prunus persica HOM05D003267 ORTHO05D003955 2.4e-36 156.4 140 60.0
Ah.03g147760 Amaranthus hybridus HOM05D003267 ORTHO05D003955 3.1e-36 156.0 140 60.0
COL.COLO4_05471 Corchorus olitorius HOM05D003267 ORTHO05D003955 5.3e-36 155.2 144 58.3
Duzib128G1544 Durio zibethinus HOM05D003267 ORTHO05D003955 5.3e-36 155.2 140 60.7
Thecc.05G331700 Theobroma cacao HOM05D003267 ORTHO05D003955 9.1e-36 154.5 140 60.7
CiPaw.02G000200 Carya illinoinensis HOM05D003267 ORTHO05D003955 1.2e-35 154.1 139 61.2
Hma1.2p1_0157F.1_g069480 Hydrangea macrophylla HOM05D003267 ORTHO05D003955 1.2e-35 154.1 146 57.5
Manes.08G105800 Manihot esculenta HOM05D003267 ORTHO05D003955 1.2e-35 154.1 144 59.0
TAR365G0992 Trochodendron aralioides HOM05D003267 ORTHO05D003955 1.6e-35 153.7 148 56.8
CSS0001783 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D003955 3.5e-35 152.5 142 57.0
CSS0029776 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D003955 3.5e-35 152.5 142 57.0
ClCG02G014560 Citrullus lanatus HOM05D003267 ORTHO05D003955 4.5e-35 152.1 147 56.5
FvH4_6g08800 Fragaria vesca HOM05D003267 ORTHO05D003955 4.5e-35 152.1 138 60.1
Aqoxy5G02882 Aquilegia oxysepala HOM05D003267 ORTHO05D003955 5.9e-35 151.8 146 57.5
MELO3C004140.2 Cucumis melo HOM05D003267 ORTHO05D003955 7.7e-35 151.4 145 57.2
CsaV3_2G007450 Cucumis sativus L. HOM05D003267 ORTHO05D003955 7.7e-35 151.4 145 57.2
Duzib177G0095 Durio zibethinus HOM05D003267 ORTHO05D003955 1.0e-34 151.0 140 59.3
Glyma.03G226700 Glycine max HOM05D003267 ORTHO05D003955 1.0e-34 151.0 140 59.3
Nn4g25260 Nelumbo nucifera HOM05D003267 ORTHO05D003955 1.0e-34 151.0 140 58.6
PGR031G3159 Punica granatum HOM05D003267 ORTHO05D003955 1.0e-34 151.0 153 56.2
CSS0009396 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D003955 1.3e-34 150.6 138 57.2
Hma1.2p1_0052F.1_g030220 Hydrangea macrophylla HOM05D003267 ORTHO05D003955 1.3e-34 150.6 139 57.6
Lj5C313G5 Lonicera japonica HOM05D003267 ORTHO05D003955 1.3e-34 150.6 138 56.5
MD12G1196900 Malus domestica HOM05D003267 ORTHO05D003955 1.3e-34 150.6 139 58.3
RcHm_v2.0_Chr3g0459061 Rosa chinensis HOM05D003267 ORTHO05D003955 2.2e-34 149.8 139 58.3
CSS0023239 Camellia sinensis var. sinensis HOM05D003267 ORTHO05D003955 2.9e-34 149.4 138 57.2
PSO210G5864 Papaver somniferum HOM05D003267 ORTHO05D003955 3.8e-34 149.1 140 58.6
VMungo1383G0366 Vigna mungo HOM05D003267 ORTHO05D003955 3.8e-34 149.1 146 56.2
PSO761G0395 Papaver somniferum HOM05D003267 ORTHO05D003955 5.0e-34 148.7 140 58.6
THA.LOC104818769 Tarenaya hassleriana HOM05D003267 ORTHO05D003955 5.0e-34 148.7 148 53.4
ATR0693G156 Amborella trichopoda HOM05D003267 ORTHO05D003955 6.5e-34 148.3 138 59.4
Potri.005G000600 Populus trichocarpa HOM05D003267 ORTHO05D003955 8.5e-34 147.9 144 56.2
Phvul.007G207100 Phaseolus vulgaris HOM05D003267 ORTHO05D003955 1.1e-33 147.5 140 55.7
Actinidia22843 Actinidia chinensis HOM05D003267 ORTHO05D003955 1.5e-33 147.1 153 52.9
Gohir.D11G286300 Gossypium hirsutum HOM05D003267 ORTHO05D003955 1.5e-33 147.1 134 59.0
Gorai.007G309700 Gossypium raimondii HOM05D003267 ORTHO05D003955 1.5e-33 147.1 134 59.0
Oeu002651.2 Olea europaea HOM05D003267 ORTHO05D003955 1.5e-33 147.1 136 57.4
Sabra05G0013400 Salix brachista HOM05D003267 ORTHO05D003955 1.9e-33 146.7 152 53.9
TPR.G8397 Trifolium pratense HOM05D003267 ORTHO05D003955 1.9e-33 146.7 140 57.1
CANSAT54G1010 Cannabis sativa HOM05D003267 ORTHO05D003955 2.5e-33 146.4 149 55.0
Cc02_g36900 Coffea canephora HOM05D003267 ORTHO05D003955 2.5e-33 146.4 138 56.5
Lj1g0010587 Lotus japonicus HOM05D003267 ORTHO05D003955 2.5e-33 146.4 138 58.7
MD04G1183500 Malus domestica HOM05D003267 ORTHO05D003955 2.5e-33 146.4 140 56.4
Aa31LG11G10050 Aethionema arabicum HOM05D003267 ORTHO05D003955 3.2e-33 146.0 134 55.2
Medtr7g111160 Medicago truncatula HOM05D003267 ORTHO05D003955 3.2e-33 146.0 141 58.2
Eucgr.H01351 Eucalyptus grandis HOM05D003267 ORTHO05D003955 4.2e-33 145.6 146 55.5
SGA_v2.0_scaffold131G34450 Striga asiatica HOM05D003267 ORTHO05D003955 4.2e-33 145.6 135 55.6
Sed0022970 Sechium edule HOM05D003267 ORTHO05D003955 5.5e-33 145.2 145 53.8
Gohir.A11G275900 Gossypium hirsutum HOM05D003267 ORTHO05D003955 7.2e-33 144.8 134 58.2
Phvul.001G220600 Phaseolus vulgaris HOM05D003267 ORTHO05D003955 7.2e-33 144.8 138 58.0
Ca_09264_v3 Cicer arietinum L. HOM05D003267 ORTHO05D003955 1.6e-32 143.7 140 55.7
Migut.B00681 Erythranthe guttata HOM05D003267 ORTHO05D003955 1.6e-32 143.7 145 54.5
MBI18_g28943_MAGBIO Magnolia biondii HOM05D003267 ORTHO05D003955 1.6e-32 143.7 140 55.7
THA.LOC104802767 Tarenaya hassleriana HOM05D003267 ORTHO05D003955 1.6e-32 143.7 148 54.1
Actinidia01652 Actinidia chinensis HOM05D003267 ORTHO05D003955 2.1e-32 143.3 138 55.8
arahy.Tifrunner.gnm1.ann1.23D8N6 Arachis hypogaea HOM05D003267 ORTHO05D003955 2.1e-32 143.3 140 56.4
arahy.Tifrunner.gnm1.ann1.X07PWR Arachis hypogaea HOM05D003267 ORTHO05D003955 2.7e-32 142.9 140 56.4
Rhsim05G0117100 Rhododendron simsii HOM05D003267 ORTHO05D003955 2.7e-32 142.9 139 56.1
Hund04395 Selenicereus undatus HOM05D003267 ORTHO05D003955 2.7e-32 142.9 145 57.9
Lalb_Chr06g0167191 Lupinus albus HOM05D003267 ORTHO05D003955 3.6e-32 142.5 139 55.4
Potri.005G000300 Populus trichocarpa HOM05D003267 ORTHO05D003955 3.6e-32 142.5 144 56.2
Rhsim11G0111200 Rhododendron simsii HOM05D003267 ORTHO05D003955 3.6e-32 142.5 154 51.9
Aa31LG5G16380 Aethionema arabicum HOM05D003267 ORTHO05D003955 4.7e-32 142.1 147 51.7
Eucgr.B01358 Eucalyptus grandis HOM05D003267 ORTHO05D003955 6.1e-32 141.7 140 52.9
Lalb_Chr07g0193041 Lupinus albus HOM05D003267 ORTHO05D003955 6.1e-32 141.7 140 54.3
MSTRG.5177 Avicennia marina HOM05D003267 ORTHO05D003955 8.0e-32 141.4 146 51.4
Rhsim05G0116900 Rhododendron simsii HOM05D003267 ORTHO05D003955 8.0e-32 141.4 139 55.4
THA.LOC104822291 Tarenaya hassleriana HOM05D003267 ORTHO05D003955 8.0e-32 141.4 140 54.3
vmacro19805 Vaccinium macrocarpon HOM05D003267 ORTHO05D003955 8.0e-32 141.4 139 56.1
Hund23017 Selenicereus undatus HOM05D003267 ORTHO05D003955 1.0e-31 141.0 145 56.6
Ciclev10028530m.g Citrus clementina HOM05D003267 ORTHO05D003955 1.4e-31 140.6 155 55.5
Psat0s4029g0080 Pisum sativum HOM05D003267 ORTHO05D003955 2.3e-31 139.8 140 55.0
Migut.N00992 Erythranthe guttata HOM05D003267 ORTHO05D003955 3.0e-31 139.4 143 53.8
Glyma.20G089700 Glycine max HOM05D003267 ORTHO05D003955 3.0e-31 139.4 141 53.2
CDE11G0971 Ceratophyllum demersum HOM05D003267 ORTHO05D003955 4.0e-31 139.0 148 54.1
Oeu033227.1 Olea europaea HOM05D003267 ORTHO05D003955 5.2e-31 138.7 136 55.1
MSTRG.27901 Avicennia marina HOM05D003267 ORTHO05D003955 6.7e-31 138.3 148 52.7
Thhalv10004284m.g Eutrema salsugineum HOM05D003267 ORTHO05D003955 6.7e-31 138.3 147 51.0
VMungo0720G0176 Vigna mungo HOM05D003267 ORTHO05D003955 6.7e-31 138.3 142 54.9
BcaB07g29962 Brassica carinata HOM05D003267 ORTHO05D003955 8.8e-31 137.9 147 50.3
Glyma.10G141000 Glycine max HOM05D003267 ORTHO05D003955 8.8e-31 137.9 142 54.9
Sed0000167 Sechium edule HOM05D003267 ORTHO05D003955 8.8e-31 137.9 140 55.0
Thhalv10020796m.g Eutrema salsugineum HOM05D003267 ORTHO05D003955 1.2e-30 137.5 147 51.7
CARHR080430 Cardamine hirsuta HOM05D003267 ORTHO05D003955 1.5e-30 137.1 142 52.1
Sp2g21400 Schrenkiella parvula HOM05D003267 ORTHO05D003955 1.5e-30 137.1 147 50.3
C02p59090 Brassica napus HOM05D003267 ORTHO05D003955 2.0e-30 136.7 147 50.3
BolC2t11964H Brassica oleracea HOM05D003267 ORTHO05D003955 2.0e-30 136.7 147 50.3
AL3G16730 Arabidopsis lyrata HOM05D003267 ORTHO05D003955 2.6e-30 136.3 152 52.0
AL6G38390 Arabidopsis lyrata HOM05D003267 ORTHO05D003955 2.6e-30 136.3 147 51.0
AT3G05940 Arabidopsis thaliana HOM05D003267 ORTHO05D003955 2.6e-30 136.3 141 51.8
AT5G26740 Arabidopsis thaliana HOM05D003267 ORTHO05D003955 2.6e-30 136.3 147 51.0
arahy.Tifrunner.gnm1.ann1.RKP3NC Arachis hypogaea HOM05D003267 ORTHO05D003955 3.3e-30 136.0 141 56.0
arahy.Tifrunner.gnm1.ann1.X4I5LU Arachis hypogaea HOM05D003267 ORTHO05D003955 3.3e-30 136.0 141 56.0
Carub.0006s2419 Capsella rubella HOM05D003267 ORTHO05D003955 3.3e-30 136.0 146 50.7
Nitab4.5_0004090g0130 Nicotiana tabacum HOM05D003267 ORTHO05D003955 3.3e-30 136.0 143 51.7
Sp3g04860 Schrenkiella parvula HOM05D003267 ORTHO05D003955 4.4e-30 135.6 147 51.0
A02p39360 Brassica napus HOM05D003267 ORTHO05D003955 5.7e-30 135.2 147 49.7
BraA02t08901Z Brassica rapa HOM05D003267 ORTHO05D003955 5.7e-30 135.2 147 49.7
Lj5g0007569 Lotus japonicus HOM05D003267 ORTHO05D003955 5.7e-30 135.2 143 55.2
BcaNung03960 Brassica carinata HOM05D003267 ORTHO05D003955 7.5e-30 134.8 140 50.7
CARHR186990 Cardamine hirsuta HOM05D003267 ORTHO05D003955 7.5e-30 134.8 147 49.7
MSTRG.20347 Avicennia marina HOM05D003267 ORTHO05D003955 9.7e-30 134.4 138 54.3
CDE05G1830 Ceratophyllum demersum HOM05D003267 ORTHO05D003955 9.7e-30 134.4 147 50.3
Peaxi162Scf00071g00134 Petunia axillaris HOM05D003267 ORTHO05D003955 9.7e-30 134.4 140 52.9
Carub.0003s0534 Capsella rubella HOM05D003267 ORTHO05D003955 1.7e-29 133.7 141 51.8
BcaNung02822 Brassica carinata HOM05D003267 ORTHO05D003955 2.2e-29 133.3 140 50.0
A06p36810 Brassica napus HOM05D003267 ORTHO05D003955 2.2e-29 133.3 140 50.0
C07p41680 Brassica napus HOM05D003267 ORTHO05D003955 2.2e-29 133.3 140 50.0
BolC7t44703H Brassica oleracea HOM05D003267 ORTHO05D003955 2.2e-29 133.3 140 50.0
BraA06t26607Z Brassica rapa HOM05D003267 ORTHO05D003955 2.2e-29 133.3 140 50.0
Glyma.19G223700 Glycine max HOM05D003267 ORTHO05D003955 2.8e-29 132.9 140 54.3
Nitab4.5_0004889g0020 Nicotiana tabacum HOM05D003267 ORTHO05D003955 2.8e-29 132.9 142 51.4
Solyc01g102480.3 Solanum lycopersicum HOM05D003267 ORTHO05D003955 2.8e-29 132.9 143 51.0
Sopen01g044920 Solanum pennellii HOM05D003267 ORTHO05D003955 2.8e-29 132.9 143 51.0
PGSC0003DMG400018231 Solanum tuberosum HOM05D003267 ORTHO05D003955 2.8e-29 132.9 143 51.0
HPP92_010911 Vanilla planifolia HOM05D003267 ORTHO05D003955 2.8e-29 132.9 138 52.9
HPP92_010916 Vanilla planifolia HOM05D003267 ORTHO05D003955 2.8e-29 132.9 138 52.9
BcaC03g17868 Brassica carinata HOM05D003267 ORTHO05D003955 3.7e-29 132.5 148 48.6
Peaxi162Scf00194g00520 Petunia axillaris HOM05D003267 ORTHO05D003955 3.7e-29 132.5 143 50.3
BcaC05g30076 Brassica carinata HOM05D003267 ORTHO05D003955 6.3e-29 131.7 147 49.7
A05p42110 Brassica napus HOM05D003267 ORTHO05D003955 6.3e-29 131.7 147 49.7
C05p61320 Brassica napus HOM05D003267 ORTHO05D003955 6.3e-29 131.7 147 49.7
BolC5t34791H Brassica oleracea HOM05D003267 ORTHO05D003955 6.3e-29 131.7 147 49.7
BraA05t22929Z Brassica rapa HOM05D003267 ORTHO05D003955 6.3e-29 131.7 147 49.7
DCAR_022330 Daucus carota HOM05D003267 ORTHO05D003955 8.2e-29 131.3 139 48.9
Nitab4.5_0001093g0040 Nicotiana tabacum HOM05D003267 ORTHO05D003955 1.4e-28 130.6 140 52.1
CAN.G1379.38 Capsicum annuum HOM05D003267 ORTHO05D003955 2.4e-28 129.8 144 49.3
Lsat_1_v5_gn_9_84121 Lactuca sativa HOM05D003267 ORTHO05D003955 5.3e-28 128.6 143 51.7
Nitab4.5_0000001g0310 Nicotiana tabacum HOM05D003267 ORTHO05D003955 5.3e-28 128.6 140 50.7
Lj9A239T58 Lonicera japonica HOM05D003267 ORTHO05D003955 7.0e-28 128.3 141 50.4
SGA_v2.0_scaffold311G48247 Striga asiatica HOM05D003267 ORTHO05D003955 5.0e-26 122.1 133 49.6
SEGI_26227 Sequoiadendron giganteum HOM05D003267 ORTHO05D003955 8.5e-26 121.3 146 49.3
HanXRQChr10g0293521 Helianthus annuus HOM05D003267 ORTHO05D003955 1.9e-25 120.2 138 50.0
vmacro01648 Vaccinium macrocarpon HOM05D003267 ORTHO05D003955 1.9e-25 120.2 122 54.9
Lsat_1_v5_gn_5_101940 Lactuca sativa HOM05D003267 ORTHO05D003955 2.5e-25 119.8 152 46.7
DCAR_003255 Daucus carota HOM05D003267 ORTHO05D003955 3.2e-25 119.4 153 45.1
ECA234G4544 Erigeron canadensis HOM05D006915 ORTHO05D003955 3.2e-25 119.4 141 51.1
SHI18005 Sapria himalayana HOM05D003267 ORTHO05D003955 4.2e-25 119.0 130 50.8
HanXRQChr16g0518801 Helianthus annuus HOM05D003267 ORTHO05D003955 1.2e-24 117.5 134 50.7
Sopen01g044890 Solanum pennellii HOM05D003267 ORTHO05D003955 2.7e-24 116.3 125 50.4
ECA236G4154 Erigeron canadensis HOM05D003267 ORTHO05D003955 8.0e-24 114.8 146 48.6
HanXRQChr07g0193681 Helianthus annuus HOM05D003267 ORTHO05D003955 1.8e-23 113.6 126 51.6
unitig_26.g9012 Utricularia gibba HOM05D003267 ORTHO05D003955 3.0e-23 112.8 146 44.5
Actinidia11705 Actinidia chinensis HOM05D003267 ORTHO05D003955 1.5e-22 110.5 112 51.8
FAN05G5115 Fragaria x ananassa HOM05D003267 ORTHO05D003955 4.4e-22 109.0 109 56.0
unitig_22.g5794 Utricularia gibba HOM05D003267 ORTHO05D003955 1.6e-19 100.5 137 43.1
Oeu061913.1 Olea europaea HOM05D003267 ORTHO05D003955 1.7e-18 97.1 108 50.9
Zm00001eb304160 Zea mays HOM05D003267 ORTHO05D003955 2.3e-18 96.7 113 48.7
DCAR_029309 Daucus carota HOM05D003267 ORTHO05D003955 1.5e-17 94.0 101 51.5
Os03g0827600 Oryza sativa ssp. japonica HOM05D003267 ORTHO05D003955 2.5e-17 93.2 113 46.9
Mapoly0177s0009 Marchantia polymorpha HOM05D003267 ORTHO05D003955 3.2e-17 92.8 140 39.3
CBR_g20293 Chara braunii HOM05D003267 ORTHO05D003955 6.1e-16 88.6 127 37.8
SMO365G0052 Selaginella moellendorffii HOM05D003267 ORTHO05D003955 6.1e-16 88.6 126 39.7
Os07g0244300 Oryza sativa ssp. japonica HOM05D003267 ORTHO05D003955 1.0e-15 87.8 139 41.7
SEGI_24145 Sequoiadendron giganteum HOM05D003267 ORTHO05D003955 1.4e-15 87.4 124 44.4
Zm00001eb063290 Zea mays HOM05D003267 ORTHO05D003955 2.3e-15 86.7 111 45.9
Zm00001eb211390 Zea mays HOM05D003267 ORTHO05D003955 3.0e-15 86.3 111 45.9
DCAR_001878 Daucus carota HOM05D003267 ORTHO05D003955 5.2e-15 85.5 109 44.0
Pp3c7_6310 Physcomitrium patens HOM05D003267 ORTHO05D003955 8.8e-15 84.7 121 38.0
SMO334G0078 Selaginella moellendorffii HOM05D003267 ORTHO05D003955 1.2e-14 84.3 113 44.2
Hund15197 Selenicereus undatus HOM05D000555 ORTHO05D000646 4.4e-14 82.4 60 66.7
Pp3c11_20710 Physcomitrium patens HOM05D003267 ORTHO05D003955 2.2e-13 80.1 121 34.7
PGR119G1814 Punica granatum HOM05D003267 ORTHO05D003955 6.3e-13 78.6 76 56.6
Solyc01g102440.3 Solanum lycopersicum HOM05D003267 ORTHO05D021886 2.9e-10 69.7 101 41.6


User provided reference genes

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