Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund12739 Selenicereus undatus HOM05D001420 ORTHO05D009292 1.3e-45 186.0 93 100.0
MBI11_g44423_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 1.5e-14 82.8 58 75.9
HanXRQChr17g0550091 Helianthus annuus HOM05D001420 ORTHO05D009292 1.7e-13 79.3 48 85.4
Lj1g0001542 Lotus japonicus HOM05D001420 ORTHO05D009292 1.7e-13 79.3 53 81.1
Oeu035224.1 Olea europaea HOM05D001420 ORTHO05D009292 2.2e-13 79.0 52 80.8
Nn3g16459 Nelumbo nucifera HOM05D001420 ORTHO05D009292 2.9e-13 78.6 54 72.2
Manes.15G161200 Manihot esculenta HOM05D001420 ORTHO05D009292 4.9e-13 77.8 59 69.5
TAR622G0082 Trochodendron aralioides HOM05D001420 ORTHO05D009292 4.9e-13 77.8 54 75.9
AUR62017830 Chenopodium quinoa HOM05D001420 ORTHO05D009292 6.4e-13 77.4 52 80.8
GSVIVG01033089001 Vitis vinifera HOM05D001420 ORTHO05D009292 8.4e-13 77.0 53 77.4
Aqoxy3G01555 Aquilegia oxysepala HOM05D001420 ORTHO05D009292 1.1e-12 76.6 54 74.1
Dinv25658 Davidia involucrata HOM05D001420 ORTHO05D002488 1.1e-12 76.6 52 78.8
arahy.Tifrunner.gnm1.ann1.WDB61R Arachis hypogaea HOM05D001420 ORTHO05D009292 1.4e-12 76.3 60 73.3
vmacro18348 Vaccinium macrocarpon HOM05D001420 ORTHO05D009292 1.4e-12 76.3 52 75.0
AUR62003518 Chenopodium quinoa HOM05D001420 ORTHO05D009292 1.9e-12 75.9 52 78.8
Haze_14879 Corylus avellana HOM05D001420 ORTHO05D009292 1.9e-12 75.9 54 75.9
Dinv33335 Davidia involucrata HOM05D001420 ORTHO05D009292 1.9e-12 75.9 52 76.9
PGR142G3591 Punica granatum HOM05D001420 ORTHO05D009292 1.9e-12 75.9 54 74.1
Sabra16G0211000 Salix brachista HOM05D001420 ORTHO05D009292 1.9e-12 75.9 52 76.9
SGA_v2.0_scaffold44G16915 Striga asiatica HOM05D001420 ORTHO05D009292 1.9e-12 75.9 52 75.0
HPP92_009721 Vanilla planifolia HOM05D001420 ORTHO05D009292 1.9e-12 75.9 55 72.7
Actinidia04437 Actinidia chinensis HOM05D001420 ORTHO05D009292 2.4e-12 75.5 52 76.9
Cpa.g.sc171.11 Carica papaya HOM05D001420 ORTHO05D009292 2.4e-12 75.5 51 76.5
Duzib147G1300 Durio zibethinus HOM05D001420 ORTHO05D009292 2.4e-12 75.5 54 72.2
Glyma.19G091500 Glycine max HOM05D001420 ORTHO05D009292 2.4e-12 75.5 53 75.5
Hma1.2p1_1278F.1_g272270 Hydrangea macrophylla HOM05D001420 ORTHO05D009292 2.4e-12 75.5 52 76.9
SalBow4G0299 Salvia bowleyana HOM05D001420 ORTHO05D009292 2.4e-12 75.5 56 71.4
SalBow4G1795 Salvia bowleyana HOM05D001420 ORTHO05D009292 2.4e-12 75.5 56 71.4
Aa31LG2G5540 Aethionema arabicum HOM05D001420 ORTHO05D009292 3.2e-12 75.1 52 71.2
Glyma.16G056200 Glycine max HOM05D001420 ORTHO05D009292 3.2e-12 75.1 53 73.6
Lsat_1_v5_gn_0_26060 Lactuca sativa HOM05D001420 ORTHO05D009292 3.2e-12 75.1 48 83.3
Atru.chr6.2574 Acer truncatum HOM05D001420 ORTHO05D009292 4.2e-12 74.7 55 70.9
Phvul.001G093200 Phaseolus vulgaris HOM05D001420 ORTHO05D009292 4.2e-12 74.7 53 75.5
TPR.G38286 Trifolium pratense HOM05D001420 ORTHO05D009292 4.2e-12 74.7 59 71.2
CSS0004965 Camellia sinensis var. sinensis HOM05D001420 ORTHO05D009292 5.4e-12 74.3 54 72.2
Medtr7g029105 Medicago truncatula HOM05D001420 ORTHO05D009292 5.4e-12 74.3 54 74.1
Potri.001G329600 Populus trichocarpa HOM05D001420 ORTHO05D009292 5.4e-12 74.3 52 75.0
THA.LOC104825624 Tarenaya hassleriana HOM05D001420 ORTHO05D009292 5.4e-12 74.3 52 71.2
MSTRG.3074 Avicennia marina HOM05D001420 ORTHO05D009292 7.1e-12 73.9 50 76.0
Cfa007225 Carpinus fangiana HOM05D001420 ORTHO05D009292 7.1e-12 73.9 54 74.1
CiPaw.03G055800 Carya illinoinensis HOM05D001420 ORTHO05D002488 7.1e-12 73.9 54 75.9
Nitab4.5_0005161g0070 Nicotiana tabacum HOM05D001420 ORTHO05D009292 7.1e-12 73.9 48 81.2
PSO478G4377 Papaver somniferum HOM05D001420 ORTHO05D009292 7.1e-12 73.9 49 75.5
Prupe.3G306700 Prunus persica HOM05D001420 ORTHO05D009292 7.1e-12 73.9 48 79.2
Rhsim08G0042700 Rhododendron simsii HOM05D001420 ORTHO05D009292 7.1e-12 73.9 52 73.1
AT3G27050 Arabidopsis thaliana HOM05D001420 ORTHO05D009292 9.3e-12 73.6 52 71.2
Gohir.A09G036000 Gossypium hirsutum HOM05D001420 ORTHO05D009292 9.3e-12 73.6 54 72.2
Sc15g0002740 Simmondsia chinensis HOM05D001420 ORTHO05D009292 9.3e-12 73.6 49 79.6
BcaB04g19424 Brassica carinata HOM05D001420 ORTHO05D009292 1.2e-11 73.2 52 71.2
BcaC04g23914 Brassica carinata HOM05D001420 ORTHO05D009292 1.2e-11 73.2 52 71.2
A09p03260 Brassica napus HOM05D001420 ORTHO05D009292 1.2e-11 73.2 52 71.2
C09p03460 Brassica napus HOM05D001420 ORTHO05D009292 1.2e-11 73.2 52 71.2
BolC9t53267H Brassica oleracea HOM05D001420 ORTHO05D009292 1.2e-11 73.2 52 71.2
BraA09t35964Z Brassica rapa HOM05D001420 ORTHO05D009292 1.2e-11 73.2 52 71.2
Thhalv10004992m.g Eutrema salsugineum HOM05D001420 ORTHO05D009292 1.2e-11 73.2 52 71.2
FAN05G4256 Fragaria x ananassa HOM05D001420 ORTHO05D009292 1.2e-11 73.2 50 78.0
Lalb_Chr22g0360361 Lupinus albus HOM05D001420 ORTHO05D009292 1.2e-11 73.2 50 78.0
RcHm_v2.0_Chr2g0175601 Rosa chinensis HOM05D001420 ORTHO05D009292 1.2e-11 73.2 48 81.2
Sp2g16180 Schrenkiella parvula HOM05D001420 ORTHO05D009292 1.2e-11 73.2 52 71.2
TWI60G0015 Tripterygium wilfordii HOM05D001420 ORTHO05D009292 1.2e-11 73.2 54 70.4
Haze_14955 Corylus avellana HOM05D001420 ORTHO05D009292 1.6e-11 72.8 54 74.1
MD09G1010400 Malus domestica HOM05D001420 ORTHO05D009292 2.1e-11 72.4 48 79.2
CANSAT64G1297 Cannabis sativa HOM05D001420 ORTHO05D009292 2.7e-11 72.0 48 81.2
Migut.F00060 Erythranthe guttata HOM05D001420 ORTHO05D009292 2.7e-11 72.0 52 71.2
Gohir.D09G037000 Gossypium hirsutum HOM05D001420 ORTHO05D009292 2.7e-11 72.0 54 70.4
Gorai.006G042300 Gossypium raimondii HOM05D001420 ORTHO05D009292 2.7e-11 72.0 54 70.4
QL02p071311 Quercus lobata HOM05D001420 ORTHO05D009292 2.7e-11 72.0 54 72.2
Thecc.04G036700 Theobroma cacao HOM05D001420 ORTHO05D009292 2.7e-11 72.0 54 70.4
AL5G16160 Arabidopsis lyrata HOM05D001420 ORTHO05D009292 3.5e-11 71.6 52 69.2
Carub.0005s0529 Capsella rubella HOM05D001420 ORTHO05D009292 3.5e-11 71.6 52 69.2
FvH4_6g53561 Fragaria vesca HOM05D001420 ORTHO05D009292 3.5e-11 71.6 48 79.2
FAN14G1551 Fragaria x ananassa HOM05D001420 ORTHO05D000136 3.5e-11 71.6 48 79.2
Ah.03g147520 Amaranthus hybridus HOM05D001420 ORTHO05D009292 4.6e-11 71.2 52 75.0
CARHR148270 Cardamine hirsuta HOM05D001420 ORTHO05D009292 6.0e-11 70.9 49 71.4
FAN09G1657 Fragaria x ananassa HOM05D001420 ORTHO05D009292 1.0e-10 70.1 48 77.1
VMungo1383G3091 Vigna mungo HOM05D001420 ORTHO05D009292 1.3e-10 69.7 53 69.8
ATR0561G272 Amborella trichopoda HOM05D001420 ORTHO05D009292 1.7e-10 69.3 52 69.2
Eucgr.I01645 Eucalyptus grandis HOM05D001420 ORTHO05D009292 2.3e-10 68.9 49 73.5
Cc07_g00860 Coffea canephora HOM05D001420 ORTHO05D009292 3.0e-10 68.6 48 75.0
Psat3g174720 Pisum sativum HOM05D001420 ORTHO05D002488 3.0e-10 68.6 50 72.0
Nitab4.5_0000559g0390 Nicotiana tabacum HOM05D001420 ORTHO05D009292 8.7e-10 67.0 55 70.9
CSS0009369 Camellia sinensis var. sinensis HOM05D001420 ORTHO05D009292 4.3e-09 64.7 68 57.4
Pp3c1_27230 Physcomitrium patens HOM05D001420 ORTHO05D009292 4.3e-09 64.7 52 63.5
PGSC0003DMG400022915 Solanum tuberosum HOM05D001420 ORTHO05D009292 4.3e-09 64.7 48 66.7
MELO3C014890.2 Cucumis melo HOM05D001420 ORTHO05D009292 5.6e-09 64.3 55 67.3
unitig_60.g25408 Utricularia gibba HOM05D001420 ORTHO05D009292 5.6e-09 64.3 56 66.1
AagrBONN_evm.TU.Sc2ySwM_228.3079 Anthoceros agrestis HOM05D001420 ORTHO05D009292 9.6e-09 63.5 52 61.5
CDE05G2056 Ceratophyllum demersum HOM05D001420 ORTHO05D009292 9.6e-09 63.5 52 61.5
CsaV3_3G026980 Cucumis sativus L. HOM05D001420 ORTHO05D009292 9.6e-09 63.5 52 69.2
PSO017G5378 Papaver somniferum HOM05D001420 ORTHO05D009292 1.3e-08 63.2 54 64.8
Pp3c14_4200 Physcomitrium patens HOM05D001420 ORTHO05D009292 2.8e-08 62.0 52 57.7
ClCG05G013550 Citrullus lanatus HOM05D001420 ORTHO05D009292 4.8e-08 61.2 49 73.5
Sed0020252 Sechium edule HOM05D001420 ORTHO05D009292 4.8e-08 61.2 49 73.5
SEGI_21368 Sequoiadendron giganteum HOM05D001420 ORTHO05D009292 1.1e-07 60.1 52 61.5
ECA246G1005 Erigeron canadensis HOM05D001420 ORTHO05D002488 5.3e-07 57.8 49 61.2
SMO119G0238 Selaginella moellendorffii HOM05D001420 ORTHO05D009292 6.9e-07 57.4 52 57.7
DCAR_021794 Daucus carota HOM05D001420 ORTHO05D009292 9.9e-06 53.5 35 80.0


User provided reference genes

Program Settings