Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund12706 Selenicereus undatus HOM05D003720 ORTHO05D005312 0.0e+00 1417.1 744 100.0
EL10Ac8g19346 Beta vulgaris HOM05D003720 ORTHO05D005312 0.0e+00 1124.0 712 82.6
AUR62027382 Chenopodium quinoa HOM05D003720 ORTHO05D005312 0.0e+00 1105.1 714 82.5
AUR62031297 Chenopodium quinoa HOM05D003720 ORTHO05D005312 0.0e+00 1099.7 716 81.6
Sc08g0004790 Simmondsia chinensis HOM05D003720 ORTHO05D005312 0.0e+00 1097.0 711 80.9
Dinv36598 Davidia involucrata HOM05D003720 ORTHO05D005312 0.0e+00 1089.7 711 79.9
Hma1.2p1_0245F.1_g101400 Hydrangea macrophylla HOM05D003720 ORTHO05D005312 0.0e+00 1085.1 711 79.5
Prupe.7G234400 Prunus persica HOM05D003720 ORTHO05D005312 0.0e+00 1085.1 714 79.4
GSVIVG01015442001 Vitis vinifera HOM05D003720 ORTHO05D005312 0.0e+00 1082.8 713 79.2
FAN28G0537 Fragaria x ananassa HOM05D003720 ORTHO05D005312 0.0e+00 1079.3 712 78.7
CSS0011692 Camellia sinensis var. sinensis HOM05D003720 ORTHO05D005312 0.0e+00 1077.8 717 80.6
CSS0041174 Camellia sinensis var. sinensis HOM05D003720 ORTHO05D005312 0.0e+00 1077.8 717 80.6
FvH4_1g04290 Fragaria vesca HOM05D003720 ORTHO05D005312 0.0e+00 1077.0 712 78.5
FAN26G1450 Fragaria x ananassa HOM05D003720 ORTHO05D005312 0.0e+00 1076.2 712 78.7
MD02G1042600 Malus domestica HOM05D003720 ORTHO05D005312 0.0e+00 1075.1 713 79.1
Dinv41570 Davidia involucrata HOM05D003720 ORTHO05D005312 5.1e-312 1073.5 710 78.9
FAN19G2601 Fragaria x ananassa HOM05D003720 ORTHO05D005312 1.5e-311 1072.4 712 78.2
TAR383G0813 Trochodendron aralioides HOM05D003720 ORTHO05D005312 6.1e-311 1070.5 705 79.3
RcHm_v2.0_Chr2g0089861 Rosa chinensis HOM05D003720 ORTHO05D005312 7.6e-311 1070.1 712 78.2
MD15G1181200 Malus domestica HOM05D003720 ORTHO05D005312 6.6e-310 1067.0 713 79.0
Thecc.09G115700 Theobroma cacao HOM05D003720 ORTHO05D005312 1.1e-309 1066.2 710 77.9
Cfa003295 Carpinus fangiana HOM05D003720 ORTHO05D005312 1.5e-309 1065.8 729 77.8
COL.COLO4_34941 Corchorus olitorius HOM05D003720 ORTHO05D005312 5.6e-309 1063.9 724 76.8
Potri.018G072600 Populus trichocarpa HOM05D003720 ORTHO05D005312 5.6e-309 1063.9 714 78.3
Actinidia26424 Actinidia chinensis HOM05D003720 ORTHO05D005312 1.2e-308 1062.8 709 79.1
Duzib168G1140 Durio zibethinus HOM05D003720 ORTHO05D005312 1.2e-308 1062.8 707 77.8
Ciclev10007224m.g Citrus clementina HOM05D003720 ORTHO05D005312 6.1e-308 1060.4 726 77.1
TAR626G1854 Trochodendron aralioides HOM05D003720 ORTHO05D005312 1.0e-307 1059.7 711 77.8
Sabra18G0064000 Salix brachista HOM05D003720 ORTHO05D005312 1.4e-307 1059.3 703 79.1
Gorai.010G068600 Gossypium raimondii HOM05D003720 ORTHO05D005312 1.8e-307 1058.9 709 77.9
CANSAT56G4488 Cannabis sativa HOM05D003720 ORTHO05D005312 6.8e-307 1057.0 713 78.1
Gohir.A06G060200 Gossypium hirsutum HOM05D003720 ORTHO05D005312 2.6e-306 1055.0 709 77.6
Cc06_g09260 Coffea canephora HOM05D003720 ORTHO05D005312 3.4e-306 1054.7 710 78.0
Manes.03G068200 Manihot esculenta HOM05D003720 ORTHO05D005312 7.5e-306 1053.5 717 77.1
QL02p086231 Quercus lobata HOM05D003720 ORTHO05D005312 9.8e-306 1053.1 730 77.0
Lj7C641G5 Lonicera japonica HOM05D003720 ORTHO05D005312 2.9e-305 1051.6 687 79.5
Cpa.g.sc23.157 Carica papaya HOM05D003720 ORTHO05D005312 4.9e-305 1050.8 711 77.8
PGR102G1985 Punica granatum HOM05D003720 ORTHO05D005312 1.1e-304 1049.7 714 77.6
TWI63G0927 Tripterygium wilfordii HOM05D003720 ORTHO05D005312 1.4e-304 1049.3 716 77.2
Actinidia07451 Actinidia chinensis HOM05D003720 ORTHO05D005312 2.4e-304 1048.5 711 78.3
Gohir.D06G058501 Gossypium hirsutum HOM05D003720 ORTHO05D005312 5.4e-304 1047.3 710 77.5
arahy.Tifrunner.gnm1.ann1.S8F21X Arachis hypogaea HOM05D003720 ORTHO05D005312 1.2e-303 1046.2 717 77.0
Glyma.17G120500 Glycine max HOM05D003720 ORTHO05D005312 1.2e-303 1046.2 713 78.0
arahy.Tifrunner.gnm1.ann1.F3YJTF Arachis hypogaea HOM05D003720 ORTHO05D005312 1.6e-303 1045.8 717 77.0
Aqoxy7G01852 Aquilegia oxysepala HOM05D003720 ORTHO05D005312 2.0e-303 1045.4 711 76.5
DCAR_028737 Daucus carota HOM05D003720 ORTHO05D005312 2.7e-303 1045.0 723 76.5
Lj4g0009521 Lotus japonicus HOM05D003720 ORTHO05D005312 1.7e-302 1042.3 713 76.7
Lalb_Chr13g0302281 Lupinus albus HOM05D003720 ORTHO05D005312 5.0e-302 1040.8 711 77.1
Rhsim03G0245400 Rhododendron simsii HOM05D003720 ORTHO05D005312 5.0e-302 1040.8 748 74.3
Nn8g39280 Nelumbo nucifera HOM05D003720 ORTHO05D005312 8.6e-302 1040.0 710 77.2
TPR.G26776 Trifolium pratense HOM05D003720 ORTHO05D005312 3.3e-301 1038.1 695 77.1
CsaV3_1G030910 Cucumis sativus L. HOM05D003720 ORTHO05D005312 4.3e-301 1037.7 706 77.1
PSO357G0216 Papaver somniferum HOM05D003720 ORTHO05D005312 1.6e-300 1035.8 707 76.5
Sed0024242 Sechium edule HOM05D003720 ORTHO05D005312 3.6e-300 1034.6 713 76.3
CiPaw.03G235900 Carya illinoinensis HOM05D003720 ORTHO05D005312 4.7e-300 1034.2 713 76.9
Lalb_Chr12g0197621 Lupinus albus HOM05D003720 ORTHO05D005312 8.0e-300 1033.5 689 77.4
Glyma.05G012400 Glycine max HOM05D003720 ORTHO05D005312 4.0e-299 1031.2 716 76.0
Eucgr.C04138 Eucalyptus grandis HOM05D003720 ORTHO05D005312 5.2e-299 1030.8 732 75.3
Manes.16G064500 Manihot esculenta HOM05D003720 ORTHO05D005312 1.5e-298 1029.2 713 76.2
Oeu002223.1 Olea europaea HOM05D003720 ORTHO05D005312 2.0e-298 1028.9 711 76.1
PGSC0003DMG400013949 Solanum tuberosum HOM05D003720 ORTHO05D005312 2.6e-298 1028.5 710 76.2
ClCG06G010450 Citrullus lanatus HOM05D003720 ORTHO05D005312 5.8e-298 1027.3 705 76.7
Sopen08g011820 Solanum pennellii HOM05D003720 ORTHO05D005312 9.8e-298 1026.5 710 75.9
Nitab4.5_0000237g0010 Nicotiana tabacum HOM05D003720 ORTHO05D005312 1.3e-297 1026.2 710 76.2
VMungo1215G1596 Vigna mungo HOM05D003720 ORTHO05D005312 1.7e-297 1025.8 722 75.5
Solyc08g021920.4 Solanum lycopersicum HOM05D003720 ORTHO05D005312 2.9e-297 1025.0 710 75.8
Medtr4g112045 Medicago truncatula HOM05D003720 ORTHO05D005312 1.9e-296 1022.3 690 76.8
CAN.G368.4 Capsicum annuum HOM05D003720 ORTHO05D005312 5.4e-296 1020.8 710 75.6
Phvul.003G176300 Phaseolus vulgaris HOM05D003720 ORTHO05D005312 2.1e-295 1018.8 734 74.1
Ca_02544_v3 Cicer arietinum L. HOM05D003720 ORTHO05D005312 1.3e-294 1016.1 726 74.5
MELO3C025310.2 Cucumis melo HOM05D003720 ORTHO05D005312 2.3e-294 1015.4 688 77.3
Migut.J01184 Erythranthe guttata HOM05D003720 ORTHO05D005312 3.9e-294 1014.6 698 76.1
THA.LOC104809021 Tarenaya hassleriana HOM05D003720 ORTHO05D005312 1.1e-293 1013.1 704 76.1
ATR0561G176 Amborella trichopoda HOM05D003720 ORTHO05D005312 5.2e-291 1004.2 718 75.6
Gorai.009G022700 Gossypium raimondii HOM05D003720 ORTHO05D005312 5.8e-290 1000.7 710 74.4
ECA234G2971 Erigeron canadensis HOM05D003720 ORTHO05D005312 1.3e-289 999.6 704 73.3
vmacro06189 Vaccinium macrocarpon HOM05D003720 ORTHO05D005312 1.3e-289 999.6 700 76.0
Gohir.D05G022400 Gossypium hirsutum HOM05D003720 ORTHO05D005312 1.7e-289 999.2 710 74.4
Gohir.A05G021000 Gossypium hirsutum HOM05D003720 ORTHO05D005312 1.1e-288 996.5 710 74.2
MSTRG.6069 Avicennia marina HOM05D003720 ORTHO05D005312 1.4e-288 996.1 708 74.3
Lsat_1_v5_gn_5_99761 Lactuca sativa HOM05D003720 ORTHO05D005312 3.9e-286 988.0 706 74.2
Os10g0575200 Oryza sativa ssp. japonica HOM05D003720 ORTHO05D005312 1.5e-285 986.1 698 73.5
SGA_v2.0_scaffold45G17079 Striga asiatica HOM05D003720 ORTHO05D005312 3.6e-284 981.5 702 73.9
Thhalv10001876m.g Eutrema salsugineum HOM05D003720 ORTHO05D005312 8.1e-284 980.3 694 74.2
HanXRQChr10g0317421 Helianthus annuus HOM05D003720 ORTHO05D005312 2.4e-283 978.8 689 73.0
SalBow6G2056 Salvia bowleyana HOM05D003720 ORTHO05D005312 8.9e-283 976.9 743 70.9
CARHR119040 Cardamine hirsuta HOM05D003720 ORTHO05D005312 2.6e-282 975.3 692 74.1
AT2G26890 Arabidopsis thaliana HOM05D003720 ORTHO05D005312 9.9e-282 973.4 695 73.8
Sp4g08590 Schrenkiella parvula HOM05D003720 ORTHO05D005312 2.2e-281 972.2 694 73.5
Carub.0004s0739 Capsella rubella HOM05D003720 ORTHO05D005312 1.1e-280 969.9 689 75.3
Zm00001eb390320 Zea mays HOM05D003720 ORTHO05D005312 1.4e-280 969.5 706 72.8
AL4G20110 Arabidopsis lyrata HOM05D003720 ORTHO05D005312 1.9e-277 959.1 692 73.4
BraA07t29508Z Brassica rapa HOM05D003720 ORTHO05D005312 1.2e-276 956.4 695 72.8
A07p17900 Brassica napus HOM05D003720 ORTHO05D005312 1.6e-276 956.1 695 72.8
SEGI_35777 Sequoiadendron giganteum HOM05D003720 ORTHO05D005312 1.6e-276 956.1 709 70.5
C04p24570 Brassica napus HOM05D003720 ORTHO05D005312 4.4e-274 948.0 693 72.7
HPP92_014850 Vanilla planifolia HOM05D003720 ORTHO05D005312 4.9e-273 944.5 714 70.7
BolC4t23961H Brassica oleracea HOM05D003720 ORTHO05D005312 7.1e-272 940.6 703 71.7
Aa31LG5G8890 Aethionema arabicum HOM05D003720 ORTHO05D005312 1.6e-271 939.5 743 69.3
PSO170G5328 Papaver somniferum HOM05D003720 ORTHO05D005312 1.3e-270 936.4 706 70.3
Psat4g042800 Pisum sativum HOM05D003720 ORTHO05D005312 1.8e-267 926.0 624 76.1
Nitab4.5_0002116g0030 Nicotiana tabacum HOM05D003720 ORTHO05D005312 1.1e-261 906.7 622 76.5
CDE06G2493 Ceratophyllum demersum HOM05D003720 ORTHO05D005312 2.8e-260 902.1 692 69.5
BcaC02g10846 Brassica carinata HOM05D003720 ORTHO05D005312 2.1e-255 885.9 667 70.5
Haze_25676 Corylus avellana HOM05D003720 ORTHO05D005312 1.9e-253 879.4 729 66.9
Mapoly0043s0138 Marchantia polymorpha HOM05D003720 ORTHO05D005312 4.5e-250 868.2 694 66.4
SMO358G0126 Selaginella moellendorffii HOM05D003720 ORTHO05D005312 3.2e-248 862.1 692 65.5
AagrBONN_evm.TU.Sc2ySwM_368.1081 Anthoceros agrestis HOM05D003720 ORTHO05D005312 7.9e-247 857.4 722 65.1
Peaxi162Scf00256g00817 Petunia axillaris HOM05D003720 ORTHO05D005312 1.0e-238 830.5 580 75.2
Pp3c13_3460 Physcomitrium patens HOM05D003720 ORTHO05D005312 5.9e-234 814.7 731 60.7
Pp3c4_24650 Physcomitrium patens HOM05D003720 ORTHO05D005312 7.9e-231 804.3 708 61.3
unitig_22.g6632 Utricularia gibba HOM05D003720 ORTHO05D005312 4.7e-223 778.5 581 71.1
CDE07G0361 Ceratophyllum demersum HOM05D003720 ORTHO05D005312 9.5e-200 701.0 539 68.6
CBR_g4479 Chara braunii HOM05D003720 ORTHO05D005312 8.6e-193 677.9 741 53.2
Atru.chr7.1285 Acer truncatum HOM05D003720 ORTHO05D005312 1.6e-170 604.0 378 84.1
Atru.chr7.1286 Acer truncatum HOM05D003720 ORTHO05D005312 4.6e-122 443.0 319 72.7
CDE07G0366 Ceratophyllum demersum HOM05D003720 ORTHO05D017820 2.3e-65 254.6 145 86.9
Cre12.g486209 Chlamydomonas reinhardtii HOM05D003720 ORTHO05D005312 1.0e-60 239.2 553 34.0
PRCOL_00006435 Prasinoderma coloniale HOM05D003720 ORTHO05D005312 2.4e-54 218.0 700 29.9
Peaxi162Scf00256g00812 Petunia axillaris HOM05D003720 ORTHO05D017820 6.0e-37 160.2 105 80.0
FAN23G1240 Fragaria x ananassa HOM05D003720 ORTHO05D005312 3.1e-33 147.9 106 67.9
unitig_22.g6633 Utricularia gibba HOM05D003720 ORTHO05D017820 2.1e-29 135.2 84 78.6
Nitab4.5_0002116g0020 Nicotiana tabacum HOM05D003720 ORTHO05D017820 1.9e-27 128.6 90 75.6
Dinv41561 Davidia involucrata HOM05D003720 ORTHO05D017820 1.1e-14 86.3 75 62.7
TAR374G0606 Trochodendron aralioides HOM05D003720 ORTHO05D017820 6.1e-13 80.5 69 65.2
Lsat_1_v5_gn_7_20540 Lactuca sativa HOM05D003720 ORTHO05D007744 8.2e-10 70.1 43 86.0
Lsat_1_v5_gn_1_94860 Lactuca sativa HOM05D003720 ORTHO05D017820 1.4e-09 69.3 46 82.6
GSVIVG01034717001 Vitis vinifera HOM05D000251 ORTHO05D000414 1.0e-07 63.2 46 69.6
Pp3c3_6650 Physcomitrium patens HOM05D003720 ORTHO05D318947 2.9e-07 61.6 77 44.2
FvH4_5g24770 Fragaria vesca HOM05D067251 ORTHO05D017820 6.5e-07 60.5 87 50.6


User provided reference genes

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