Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund12692 Selenicereus undatus HOM05D002952 ORTHO05D003361 2.8e-100 368.6 189 100.0
DCAR_014676 Daucus carota HOM05D002952 ORTHO05D003361 6.2e-15 85.1 44 88.6
CiPaw.07G198300 Carya illinoinensis HOM05D002952 ORTHO05D003361 1.8e-14 83.6 43 90.7
Duzib150G0495 Durio zibethinus HOM05D002952 ORTHO05D003361 1.8e-14 83.6 43 93.0
Lalb_Chr13g0299871 Lupinus albus HOM05D002952 ORTHO05D003361 1.8e-14 83.6 43 90.7
Thecc.09G188100 Theobroma cacao HOM05D002952 ORTHO05D003361 1.8e-14 83.6 43 93.0
Glyma.09G060600 Glycine max HOM05D002952 ORTHO05D003361 2.4e-14 83.2 43 90.7
Glyma.15G167100 Glycine max HOM05D002952 ORTHO05D003361 2.4e-14 83.2 43 90.7
Gohir.A13G207800 Gossypium hirsutum HOM05D002952 ORTHO05D003361 2.4e-14 83.2 43 93.0
Gohir.D13G212300 Gossypium hirsutum HOM05D002952 ORTHO05D003361 2.4e-14 83.2 43 93.0
Gorai.013G242600 Gossypium raimondii HOM05D002952 ORTHO05D003361 2.4e-14 83.2 43 93.0
Phvul.009G235200 Phaseolus vulgaris HOM05D002952 ORTHO05D003361 3.1e-14 82.8 43 90.7
Prupe.1G073600 Prunus persica HOM05D002952 ORTHO05D003361 3.1e-14 82.8 43 90.7
VMungo1309G2675 Vigna mungo HOM05D002952 ORTHO05D003361 3.1e-14 82.8 43 90.7
FvH4_4g07030 Fragaria vesca HOM05D002952 ORTHO05D003361 4.0e-14 82.4 43 86.0
FAN17G1204 Fragaria x ananassa HOM05D002952 ORTHO05D003361 4.0e-14 82.4 43 86.0
Lsat_1_v5_gn_7_55800 Lactuca sativa HOM05D002952 ORTHO05D003361 4.0e-14 82.4 43 86.0
MD13G1240300 Malus domestica HOM05D002952 ORTHO05D003361 4.0e-14 82.4 43 90.7
RcHm_v2.0_Chr4g0399151 Rosa chinensis HOM05D002952 ORTHO05D003361 4.0e-14 82.4 43 86.0
EL10Ac8g19298 Beta vulgaris HOM05D002952 ORTHO05D003361 5.3e-14 82.0 43 88.4
Eucgr.C00100 Eucalyptus grandis HOM05D002952 ORTHO05D003361 5.3e-14 82.0 43 86.0
Manes.06G018200 Manihot esculenta HOM05D002952 ORTHO05D003361 5.3e-14 82.0 43 86.0
Sc14g0003040 Simmondsia chinensis HOM05D002952 ORTHO05D003361 5.3e-14 82.0 43 88.4
TPR.G31045 Trifolium pratense HOM05D002952 ORTHO05D003361 5.3e-14 82.0 43 90.7
vmacro05990 Vaccinium macrocarpon HOM05D002952 ORTHO05D003361 5.3e-14 82.0 43 88.4
Actinidia38497 Actinidia chinensis HOM05D002952 ORTHO05D003361 6.9e-14 81.6 43 88.4
Aa31LG8G16340 Aethionema arabicum HOM05D002952 ORTHO05D003361 6.9e-14 81.6 43 86.0
COL.COLO4_23445 Corchorus olitorius HOM05D002952 ORTHO05D003361 6.9e-14 81.6 43 90.7
MELO3C003959.2 Cucumis melo HOM05D002952 ORTHO05D003361 6.9e-14 81.6 43 86.0
Ah.09g229420 Amaranthus hybridus HOM05D002952 ORTHO05D003361 9.0e-14 81.3 51 76.5
Lj6g0025977 Lotus japonicus HOM05D002952 ORTHO05D003361 9.0e-14 81.3 43 83.7
Nn8g40677 Nelumbo nucifera HOM05D002952 ORTHO05D003361 9.0e-14 81.3 43 88.4
Ca_02121_v3 Cicer arietinum L. HOM05D002952 ORTHO05D003361 1.2e-13 80.9 43 90.7
Lalb_Chr07g0180711 Lupinus albus HOM05D002952 ORTHO05D003361 1.2e-13 80.9 43 86.0
Rhsim03G0267600 Rhododendron simsii HOM05D002952 ORTHO05D003361 1.2e-13 80.9 43 86.0
AUR62027417 Chenopodium quinoa HOM05D002952 ORTHO05D003361 1.5e-13 80.5 43 86.0
AUR62031276 Chenopodium quinoa HOM05D002952 ORTHO05D003361 1.5e-13 80.5 43 86.0
Sed0020294 Sechium edule HOM05D002952 ORTHO05D003361 1.5e-13 80.5 43 86.0
CSS0013758 Camellia sinensis var. sinensis HOM05D002952 ORTHO05D003361 2.0e-13 80.1 43 86.0
Dinv25450 Davidia involucrata HOM05D002952 ORTHO05D003361 2.0e-13 80.1 43 86.0
Dinv41190 Davidia involucrata HOM05D002952 ORTHO05D003361 2.0e-13 80.1 43 86.0
Potri.018G140800 Populus trichocarpa HOM05D002952 ORTHO05D003361 2.0e-13 80.1 43 86.0
PGR142G2741 Punica granatum HOM05D002952 ORTHO05D003361 2.0e-13 80.1 43 86.0
Aqoxy7G02883 Aquilegia oxysepala HOM05D002952 ORTHO05D003361 2.6e-13 79.7 43 88.4
CsaV3_2G008810 Cucumis sativus L. HOM05D002952 ORTHO05D003361 2.6e-13 79.7 43 83.7
Medtr2g038210 Medicago truncatula HOM05D002952 ORTHO05D003361 2.6e-13 79.7 43 88.4
QL02p047088 Quercus lobata HOM05D002952 ORTHO05D003361 2.6e-13 79.7 43 86.0
ClCG11G011660 Citrullus lanatus HOM05D002952 ORTHO05D003361 3.4e-13 79.3 43 83.7
Cc06_g17430 Coffea canephora HOM05D002952 ORTHO05D003361 3.4e-13 79.3 43 86.0
Psat4g013440 Pisum sativum HOM05D002952 ORTHO05D003361 4.5e-13 79.0 43 83.7
BcaB03g14394 Brassica carinata HOM05D002952 ORTHO05D003361 5.8e-13 78.6 44 79.5
BcaB08g34852 Brassica carinata HOM05D002952 ORTHO05D003361 5.8e-13 78.6 43 81.4
Psat1g143480 Pisum sativum HOM05D002952 ORTHO05D003361 5.8e-13 78.6 43 86.0
BcaB03g16719 Brassica carinata HOM05D002952 ORTHO05D003361 7.6e-13 78.2 43 81.4
BcaC06g36561 Brassica carinata HOM05D002952 ORTHO05D003361 7.6e-13 78.2 43 81.4
BraA07t27938Z Brassica rapa HOM05D002952 ORTHO05D003361 7.6e-13 78.2 43 81.4
BraA07t27939Z Brassica rapa HOM05D002952 ORTHO05D003361 7.6e-13 78.2 43 81.4
CAN.G32.3 Capsicum annuum HOM05D002952 ORTHO05D003361 7.6e-13 78.2 43 79.1
MD16G1247000 Malus domestica HOM05D000002 ORTHO05D003361 7.6e-13 78.2 43 83.7
Phvul.003G140400 Phaseolus vulgaris HOM05D002952 ORTHO05D003361 1.0e-12 77.8 43 83.7
THA.LOC104814647 Tarenaya hassleriana HOM05D002952 ORTHO05D003361 1.0e-12 77.8 43 81.4
Nitab4.5_0006774g0010 Nicotiana tabacum HOM05D002952 ORTHO05D003361 1.3e-12 77.4 43 81.4
Solyc07g018100.2 Solanum lycopersicum HOM05D002952 ORTHO05D003361 1.3e-12 77.4 43 81.4
Sopen07g007020 Solanum pennellii HOM05D002952 ORTHO05D003361 1.3e-12 77.4 43 81.4
Atru.chr7.937 Acer truncatum HOM05D002952 ORTHO05D003361 1.7e-12 77.0 43 81.4
Medtr4g127210 Medicago truncatula HOM05D002952 ORTHO05D003361 1.7e-12 77.0 43 83.7
C07p02900 Brassica napus HOM05D002952 ORTHO05D003361 2.2e-12 76.6 43 81.4
BolC7t40687H Brassica oleracea HOM05D002952 ORTHO05D003361 2.2e-12 76.6 43 81.4
FAN07G2391 Fragaria x ananassa HOM05D002952 ORTHO05D003361 2.2e-12 76.6 47 78.7
FAN12G2043 Fragaria x ananassa HOM05D002952 ORTHO05D003361 2.2e-12 76.6 47 78.7
FAN22G0487 Fragaria x ananassa HOM05D002952 ORTHO05D003361 2.2e-12 76.6 47 78.7
Sabra18G0115000 Salix brachista HOM05D002952 ORTHO05D003361 2.2e-12 76.6 43 81.4
ATR0580G026 Amborella trichopoda HOM05D002952 ORTHO05D003361 2.9e-12 76.3 43 79.1
Carub.0005s0695 Capsella rubella HOM05D002952 ORTHO05D003361 2.9e-12 76.3 43 79.1
Lj4g0023754 Lotus japonicus HOM05D002952 ORTHO05D003361 2.9e-12 76.3 43 83.7
MBI16_g46830_MAGBIO Magnolia biondii HOM05D002952 ORTHO05D003361 2.9e-12 76.3 43 79.1
THA.LOC104803958 Tarenaya hassleriana HOM05D002952 ORTHO05D003361 2.9e-12 76.3 43 76.7
C07p24030 Brassica napus HOM05D002952 ORTHO05D003361 3.8e-12 75.9 43 79.1
BolC7t42928H Brassica oleracea HOM05D002952 ORTHO05D003361 3.8e-12 75.9 43 79.1
Psat2g063920 Pisum sativum HOM05D002952 ORTHO05D003361 3.8e-12 75.9 43 83.7
Potri.006G073600 Populus trichocarpa HOM05D002952 ORTHO05D003361 3.8e-12 75.9 43 79.1
Nitab4.5_0001245g0040 Nicotiana tabacum HOM05D002952 ORTHO05D003361 4.9e-12 75.5 42 81.0
Sp3g32670 Schrenkiella parvula HOM05D002952 ORTHO05D003361 4.9e-12 75.5 43 79.1
MSTRG.5937 Avicennia marina HOM05D002952 ORTHO05D003361 6.5e-12 75.1 43 79.1
Sabra06G0054900 Salix brachista HOM05D002952 ORTHO05D003361 6.5e-12 75.1 43 79.1
SEGI_03548 Sequoiadendron giganteum HOM05D002952 ORTHO05D003361 6.5e-12 75.1 43 79.1
HPP92_015379 Vanilla planifolia HOM05D002952 ORTHO05D003361 6.5e-12 75.1 43 79.1
GSVIVG01029303001 Vitis vinifera HOM05D002952 ORTHO05D003361 8.4e-12 74.7 43 79.1
AT3G28430 Arabidopsis thaliana HOM05D002952 ORTHO05D003361 1.1e-11 74.3 43 79.1
BraA07t29362Z Brassica rapa HOM05D002952 ORTHO05D003361 1.1e-11 74.3 43 76.7
AL5G18050 Arabidopsis lyrata HOM05D002952 ORTHO05D003361 1.4e-11 73.9 43 76.7
Migut.J00788 Erythranthe guttata HOM05D002952 ORTHO05D003361 1.4e-11 73.9 43 79.1
CANSAT01G1287 Cannabis sativa HOM05D002952 ORTHO05D003361 1.9e-11 73.6 43 83.7
Ciclev10007425m.g Citrus clementina HOM05D002952 ORTHO05D003361 1.9e-11 73.6 43 79.1
HanXRQChr03g0065441 Helianthus annuus HOM05D002952 ORTHO05D003361 1.9e-11 73.6 42 81.0
MBI14_g10721_MAGBIO Magnolia biondii HOM05D002952 ORTHO05D003361 1.9e-11 73.6 43 81.4
A07p01440 Brassica napus HOM05D002952 ORTHO05D003361 2.5e-11 73.2 43 79.1
Thhalv10022546m.g Eutrema salsugineum HOM05D002952 ORTHO05D003361 2.5e-11 73.2 43 76.7
A07p16350 Brassica napus HOM05D002952 ORTHO05D003361 3.2e-11 72.8 43 74.4
Zm00001eb420400 Zea mays HOM05D002952 ORTHO05D003361 4.2e-11 72.4 43 76.7
HanXRQChr03g0065421 Helianthus annuus HOM05D002952 ORTHO05D003361 9.3e-11 71.2 40 80.0
Lju170C21T3 Lonicera japonica HOM05D002952 ORTHO05D003361 9.3e-11 71.2 49 77.6
Os04g0298600 Oryza sativa ssp. japonica HOM05D002952 ORTHO05D003361 9.3e-11 71.2 43 76.7
Oeu064560.1 Olea europaea HOM05D002952 ORTHO05D003361 1.6e-10 70.5 36 86.1
PSO063G0242 Papaver somniferum HOM05D002952 ORTHO05D003361 1.6e-10 70.5 42 78.6
PSO170G2574 Papaver somniferum HOM05D002952 ORTHO05D003361 1.6e-10 70.5 42 78.6
Peaxi162Scf00231g00917 Petunia axillaris HOM05D002952 ORTHO05D003361 3.5e-10 69.3 36 83.3
HanXRQChr09g0245381 Helianthus annuus HOM05D002952 ORTHO05D003361 4.6e-10 68.9 43 72.1
ECA240G1792 Erigeron canadensis HOM05D002952 ORTHO05D003361 2.3e-09 66.6 43 69.8
arahy.Tifrunner.gnm1.ann1.32QIWM Arachis hypogaea HOM05D002952 ORTHO05D003361 6.7e-09 65.1 70 51.4
CDE05G2650 Ceratophyllum demersum HOM05D002952 ORTHO05D003361 8.7e-09 64.7 42 66.7
arahy.Tifrunner.gnm1.ann1.MZE1GT Arachis hypogaea HOM05D002952 ORTHO05D003361 1.1e-08 64.3 72 50.0
Mapoly0006s0005 Marchantia polymorpha HOM05D002952 ORTHO05D003361 3.3e-08 62.8 43 65.1
Haze_22041 Corylus avellana HOM05D002952 ORTHO05D003361 2.2e-07 60.1 33 84.8
Nn6g34739 Nelumbo nucifera HOM05D002952 ORTHO05D003361 3.7e-07 59.3 57 49.1
Pp3c5_16960 Physcomitrium patens HOM05D002952 ORTHO05D003361 6.3e-07 58.5 43 53.5


User provided reference genes

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