Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund12449 Selenicereus undatus HOM05D004760 ORTHO05D006114 4.8e-94 347.8 176 100.0
Hund01473 Selenicereus undatus HOM05D004760 ORTHO05D006114 4.0e-40 168.7 88 93.2
Thecc.09G348500 Theobroma cacao HOM05D004760 ORTHO05D006114 7.3e-34 147.9 86 84.9
Ciclev10002842m.g Citrus clementina HOM05D004760 ORTHO05D006114 1.2e-33 147.1 86 81.4
GSVIVG01031504001 Vitis vinifera HOM05D004760 ORTHO05D006114 1.6e-33 146.7 87 80.5
Atru.chr10.822 Acer truncatum HOM05D004760 ORTHO05D006114 2.8e-33 146.0 86 80.2
Cfa010341 Carpinus fangiana HOM05D004760 ORTHO05D006114 2.8e-33 146.0 87 81.6
Haze_23747 Corylus avellana HOM05D004760 ORTHO05D006114 2.8e-33 146.0 87 81.6
AUR62034436 Chenopodium quinoa HOM05D004760 ORTHO05D006114 3.6e-33 145.6 85 82.4
Atru.chr10.811 Acer truncatum HOM05D004760 ORTHO05D006114 4.7e-33 145.2 86 80.2
Ah.15g090630 Amaranthus hybridus HOM05D004760 ORTHO05D006114 4.7e-33 145.2 85 80.0
Gohir.A03G030600 Gossypium hirsutum HOM05D004760 ORTHO05D006114 6.2e-33 144.8 86 82.6
Cpa.g.sc94.2 Carica papaya HOM05D004760 ORTHO05D006114 1.1e-32 144.1 83 83.1
COL.COLO4_03696 Corchorus olitorius HOM05D004760 ORTHO05D006114 1.4e-32 143.7 83 83.1
Duzib150G1663 Durio zibethinus HOM05D004760 ORTHO05D006114 1.4e-32 143.7 86 81.4
CANSAT80G1575 Cannabis sativa HOM05D004760 ORTHO05D006114 1.8e-32 143.3 87 80.5
CAN.G546.10 Capsicum annuum HOM05D004760 ORTHO05D006114 1.8e-32 143.3 86 77.9
ClCG02G021440 Citrullus lanatus HOM05D004760 ORTHO05D006114 2.4e-32 142.9 86 79.1
PGSC0003DMG400008072 Solanum tuberosum HOM05D004760 ORTHO05D006114 2.4e-32 142.9 86 77.9
EL10Ac9g22581 Beta vulgaris HOM05D004760 ORTHO05D006114 3.1e-32 142.5 85 76.5
CsaV3_4G002110 Cucumis sativus L. HOM05D004760 ORTHO05D006114 3.1e-32 142.5 84 77.4
Dinv29358 Davidia involucrata HOM05D004760 ORTHO05D006114 3.1e-32 142.5 86 79.1
MD00G1033500 Malus domestica HOM05D004760 ORTHO05D006114 3.1e-32 142.5 93 76.3
THA.LOC104810873 Tarenaya hassleriana HOM05D004760 ORTHO05D006114 4.0e-32 142.1 83 79.5
Migut.D02262 Erythranthe guttata HOM05D004760 ORTHO05D006114 5.2e-32 141.7 83 78.3
FAN11G0015 Fragaria x ananassa HOM05D004760 ORTHO05D006114 5.2e-32 141.7 87 75.9
Gohir.D03G137800 Gossypium hirsutum HOM05D004760 ORTHO05D006114 5.2e-32 141.7 86 82.6
Gorai.003G144700 Gossypium raimondii HOM05D004760 ORTHO05D006114 5.2e-32 141.7 86 82.6
PGSC0003DMG400008071 Solanum tuberosum HOM05D004760 ORTHO05D006114 5.2e-32 141.7 84 78.6
PGSC0003DMG400008118 Solanum tuberosum HOM05D004760 ORTHO05D006114 6.8e-32 141.4 86 76.7
AUR62014927 Chenopodium quinoa HOM05D004760 ORTHO05D006114 8.9e-32 141.0 83 81.9
MELO3C033128.2 Cucumis melo HOM05D004760 ORTHO05D006114 8.9e-32 141.0 84 76.2
Oeu014013.2 Olea europaea HOM05D004760 ORTHO05D006114 8.9e-32 141.0 86 77.9
arahy.Tifrunner.gnm1.ann1.TWBW4W Arachis hypogaea HOM05D004760 ORTHO05D006114 1.2e-31 140.6 87 78.2
CiPaw.14G087800 Carya illinoinensis HOM05D004760 ORTHO05D006114 1.2e-31 140.6 84 78.6
Rhsim01G0212000 Rhododendron simsii HOM05D004760 ORTHO05D006114 1.2e-31 140.6 83 78.3
TWI79G1159 Tripterygium wilfordii HOM05D004760 ORTHO05D006114 1.2e-31 140.6 84 77.4
arahy.Tifrunner.gnm1.ann1.HQ4852 Arachis hypogaea HOM05D004760 ORTHO05D006114 1.5e-31 140.2 87 77.0
Prupe.6G108700 Prunus persica HOM05D004760 ORTHO05D006114 1.5e-31 140.2 91 73.6
Sp5g16240 Schrenkiella parvula HOM05D004760 ORTHO05D006114 1.5e-31 140.2 84 77.4
Sopen11g027800 Solanum pennellii HOM05D004760 ORTHO05D006114 1.5e-31 140.2 86 76.7
Manes.15G173300 Manihot esculenta HOM05D004760 ORTHO05D006114 2.6e-31 139.4 86 76.7
QL01p015831 Quercus lobata HOM05D004760 ORTHO05D006114 2.6e-31 139.4 86 74.4
TWI31G0427 Tripterygium wilfordii HOM05D004760 ORTHO05D006114 2.6e-31 139.4 84 76.2
arahy.Tifrunner.gnm1.ann1.KI0H1T Arachis hypogaea HOM05D004760 ORTHO05D006114 3.4e-31 139.0 87 77.0
BcaC01g02002 Brassica carinata HOM05D004760 ORTHO05D006114 3.4e-31 139.0 84 77.4
C03p69650 Brassica napus HOM05D004760 ORTHO05D006114 3.4e-31 139.0 84 77.4
BolC3t19223H Brassica oleracea HOM05D004760 ORTHO05D006114 3.4e-31 139.0 84 77.4
CARHR150950 Cardamine hirsuta HOM05D004760 ORTHO05D006114 3.4e-31 139.0 84 77.4
Thhalv10002715m.g Eutrema salsugineum HOM05D004760 ORTHO05D006114 3.4e-31 139.0 84 76.2
A06p21630 Brassica napus HOM05D004760 ORTHO05D006114 4.4e-31 138.7 84 76.2
BraA06t25253Z Brassica rapa HOM05D004760 ORTHO05D006114 4.4e-31 138.7 84 76.2
Lj3g0014185 Lotus japonicus HOM05D004760 ORTHO05D006114 4.4e-31 138.7 83 79.5
PGSC0003DMG400005521 Solanum tuberosum HOM05D004760 ORTHO05D006114 5.8e-31 138.3 84 77.4
vmacro14407 Vaccinium macrocarpon HOM05D004760 ORTHO05D006114 7.6e-31 137.9 83 77.1
CSS0038756 Camellia sinensis var. sinensis HOM05D004760 ORTHO05D006114 9.9e-31 137.5 88 76.1
Glyma.03G099400 Glycine max HOM05D004760 ORTHO05D006114 9.9e-31 137.5 89 74.2
SalBow3G2862 Salvia bowleyana HOM05D004760 ORTHO05D006114 9.9e-31 137.5 83 77.1
Eucgr.C00623 Eucalyptus grandis HOM05D004760 ORTHO05D006114 1.3e-30 137.1 84 76.2
TPR.G21885 Trifolium pratense HOM05D004760 ORTHO05D006114 1.7e-30 136.7 88 77.3
BcaB01g01128 Brassica carinata HOM05D004760 ORTHO05D006114 2.9e-30 136.0 84 75.0
Lj1C207G1 Lonicera japonica HOM05D000681 ORTHO05D003832 2.9e-30 136.0 87 73.6
Potri.004G214400 Populus trichocarpa HOM05D004760 ORTHO05D006114 2.9e-30 136.0 88 75.0
FAN25G2761 Fragaria x ananassa HOM05D004760 ORTHO05D006114 3.8e-30 135.6 86 74.4
TAR636G2244 Trochodendron aralioides HOM05D004760 ORTHO05D006114 3.8e-30 135.6 81 76.5
MSTRG.22442 Avicennia marina HOM05D004760 ORTHO05D006114 4.9e-30 135.2 84 75.0
HanXRQChr14g0432111 Helianthus annuus HOM05D004760 ORTHO05D006114 4.9e-30 135.2 86 77.9
Oeu013537.1 Olea europaea HOM05D004760 ORTHO05D006114 4.9e-30 135.2 86 76.7
Aa31LG4G14120 Aethionema arabicum HOM05D004760 ORTHO05D006114 6.4e-30 134.8 83 75.9
Ca_08122_v3 Cicer arietinum L. HOM05D004760 ORTHO05D006114 6.4e-30 134.8 87 75.9
Manes.04G015300 Manihot esculenta HOM05D004760 ORTHO05D006114 6.4e-30 134.8 86 72.1
Sed0008060 Sechium edule HOM05D004760 ORTHO05D006114 6.4e-30 134.8 87 73.6
Cc01_g10530 Coffea canephora HOM05D004760 ORTHO05D006114 8.4e-30 134.4 89 70.8
Psat3g094560 Pisum sativum HOM05D004760 ORTHO05D006114 8.4e-30 134.4 84 78.6
Carub.0005s1081 Capsella rubella HOM05D004760 ORTHO05D006114 1.1e-29 134.0 77 80.5
ECA233G3649 Erigeron canadensis HOM05D004760 ORTHO05D006114 1.1e-29 134.0 86 76.7
ECA238G2603 Erigeron canadensis HOM05D004760 ORTHO05D006114 1.4e-29 133.7 86 75.6
Rhsim13G0099000 Rhododendron simsii HOM05D004760 ORTHO05D006114 1.9e-29 133.3 78 82.1
AT3G45020 Arabidopsis thaliana HOM05D004760 ORTHO05D006114 2.4e-29 132.9 78 78.2
FAN21G0726 Fragaria x ananassa HOM05D004760 ORTHO05D006114 2.4e-29 132.9 86 72.1
Peaxi162Scf00351g00053 Petunia axillaris HOM05D004760 ORTHO05D006114 2.4e-29 132.9 83 77.1
PGSC0003DMG400035806 Solanum tuberosum HOM05D004760 ORTHO05D006114 2.4e-29 132.9 86 73.3
VMungo0331G0086 Vigna mungo HOM05D004760 ORTHO05D006114 2.4e-29 132.9 84 77.4
AL5G23480 Arabidopsis lyrata HOM05D004760 ORTHO05D006114 3.2e-29 132.5 77 77.9
arahy.Tifrunner.gnm1.ann1.DTBR3Z Arachis hypogaea HOM05D004760 ORTHO05D006114 3.2e-29 132.5 87 73.6
DCAR_013702 Daucus carota HOM05D004760 ORTHO05D006114 4.1e-29 132.1 92 69.6
Lsat_1_v5_gn_2_99521 Lactuca sativa HOM05D004760 ORTHO05D006114 4.1e-29 132.1 86 76.7
Sc06g0010910 Simmondsia chinensis HOM05D004760 ORTHO05D006114 4.1e-29 132.1 83 74.7
Sc06g0010990 Simmondsia chinensis HOM05D004760 ORTHO05D006114 4.1e-29 132.1 83 74.7
Aqoxy1G01159 Aquilegia oxysepala HOM05D004760 ORTHO05D006114 7.1e-29 131.3 81 74.1
Medtr7g083650 Medicago truncatula HOM05D004760 ORTHO05D006114 7.1e-29 131.3 88 75.0
C01p34030 Brassica napus HOM05D004760 ORTHO05D006114 9.2e-29 131.0 80 73.8
BolC1t03372H Brassica oleracea HOM05D004760 ORTHO05D006114 9.2e-29 131.0 80 73.8
BcaC09g49679 Brassica carinata HOM05D004760 ORTHO05D006114 3.5e-28 129.0 80 72.5
Nitab4.5_0002033g0060 Nicotiana tabacum HOM05D004760 ORTHO05D006114 3.5e-28 129.0 84 72.6
Sabra04G0145500 Salix brachista HOM05D004760 ORTHO05D006114 4.6e-28 128.6 86 70.9
QL11p023169 Quercus lobata HOM05D004760 ORTHO05D006114 1.0e-27 127.5 83 69.9
PGR083G1146 Punica granatum HOM05D004760 ORTHO05D006114 1.3e-27 127.1 86 73.3
Lalb_Chr01g0004501 Lupinus albus HOM05D004760 ORTHO05D006114 1.7e-27 126.7 80 77.5
arahy.Tifrunner.gnm1.ann1.PKX4UH Arachis hypogaea HOM05D004760 ORTHO05D006114 2.3e-27 126.3 85 70.6
SHI30132 Sapria himalayana HOM05D004760 ORTHO05D006114 3.0e-27 125.9 89 67.4
Actinidia13489 Actinidia chinensis HOM05D004760 ORTHO05D006114 3.9e-27 125.6 71 84.5
Actinidia07172 Actinidia chinensis HOM05D004760 ORTHO05D006114 5.1e-27 125.2 68 88.2
arahy.Tifrunner.gnm1.ann1.JVX2H3 Arachis hypogaea HOM05D004760 ORTHO05D002586 1.5e-26 123.6 89 67.4
unitig_21.g20191 Utricularia gibba HOM05D001235 ORTHO05D005684 1.9e-26 123.2 89 65.2
SGA_v2.0_scaffold263G45970 Striga asiatica HOM05D004760 ORTHO05D006114 2.5e-26 122.9 78 74.4
RcHm_v2.0_Chr4g0444611 Rosa chinensis HOM05D004760 ORTHO05D006114 5.6e-26 121.7 87 70.1
arahy.Tifrunner.gnm1.ann1.0NB9P2 Arachis hypogaea HOM05D004760 ORTHO05D006114 9.6e-26 120.9 81 71.6
FAN16G0053 Fragaria x ananassa HOM05D004760 ORTHO05D006114 1.6e-25 120.2 88 68.2
Eucgr.B02540 Eucalyptus grandis HOM05D004760 ORTHO05D006114 4.0e-24 115.5 83 66.3
SHI02979 Sapria himalayana HOM05D004760 ORTHO05D006114 4.0e-24 115.5 80 65.0
MBI18_g16202_MAGBIO Magnolia biondii HOM05D004760 ORTHO05D006114 6.9e-24 114.8 143 47.6
Haze_20543 Corylus avellana HOM05D004760 ORTHO05D006114 2.0e-23 113.2 88 58.0
CDE09G0496 Ceratophyllum demersum HOM05D004760 ORTHO05D001676 7.6e-23 111.3 88 63.6
CDE02G4002 Ceratophyllum demersum HOM05D004760 ORTHO05D006114 4.9e-22 108.6 88 62.5
Nn7g38254 Nelumbo nucifera HOM05D004760 ORTHO05D006114 1.4e-21 107.1 61 83.6
Nitab4.5_0002186g0070 Nicotiana tabacum HOM05D004760 ORTHO05D006114 1.4e-21 107.1 73 69.9
PGR102G1962 Punica granatum HOM05D004760 ORTHO05D006114 2.4e-21 106.3 80 65.0
RcHm_v2.0_Chr5g0057731 Rosa chinensis HOM05D004760 ORTHO05D006114 2.4e-21 106.3 61 83.6
ECA240G4818 Erigeron canadensis HOM05D007880 ORTHO05D003386 4.2e-21 105.5 62 83.9
Actinidia14009 Actinidia chinensis HOM05D004760 ORTHO05D006114 9.3e-21 104.4 66 77.3
HPP92_025344 Vanilla planifolia HOM05D004760 ORTHO05D006114 1.2e-20 104.0 84 61.9
FvH4_3g31090 Fragaria vesca HOM05D004760 ORTHO05D006114 2.1e-20 103.2 61 78.7
A01p26650 Brassica napus HOM05D004760 ORTHO05D006114 1.0e-19 100.9 61 77.0
BraA01t02596Z Brassica rapa HOM05D004760 ORTHO05D006114 1.0e-19 100.9 61 77.0
Os09g0549700 Oryza sativa ssp. japonica HOM05D004760 ORTHO05D006114 2.3e-19 99.8 81 63.0
PSO801G0746 Papaver somniferum HOM05D004760 ORTHO05D006114 1.5e-18 97.1 90 57.8
BcaB05g23055 Brassica carinata HOM05D004760 ORTHO05D006114 2.5e-18 96.3 84 58.3
Medtr1g080050 Medicago truncatula HOM05D004760 ORTHO05D006114 5.6e-18 95.1 88 59.1
Lalb_Chr02g0155851 Lupinus albus HOM05D004760 ORTHO05D006114 9.6e-18 94.4 80 56.2
Solyc11g069080.3 Solanum lycopersicum HOM05D004760 ORTHO05D006114 1.3e-17 94.0 58 75.9
PSO339G3989 Papaver somniferum HOM05D004760 ORTHO05D006114 2.1e-17 93.2 83 60.2
DCAR_008992 Daucus carota HOM05D004760 ORTHO05D006114 4.8e-17 92.0 90 51.1
Zm00001eb320920 Zea mays HOM05D004760 ORTHO05D006114 4.8e-17 92.0 81 58.0
Dinv37316 Davidia involucrata HOM05D004760 ORTHO05D006114 8.1e-17 91.3 58 70.7
Ca_06514_v3 Cicer arietinum L. HOM05D004760 ORTHO05D006114 1.4e-16 90.5 60 75.0
ATR0152G025 Amborella trichopoda HOM05D004760 ORTHO05D006114 6.9e-16 88.2 77 54.5
VMungo0720G1193 Vigna mungo HOM05D004760 ORTHO05D006114 2.0e-15 86.7 83 49.4
Ca_11503_v3 Cicer arietinum L. HOM05D004760 ORTHO05D006114 5.8e-15 85.1 91 46.2
TPR.G11257 Trifolium pratense HOM05D004760 ORTHO05D006114 9.9e-15 84.3 90 51.1
Lj5g0000803 Lotus japonicus HOM05D004760 ORTHO05D006114 1.7e-14 83.6 113 45.1
Glyma.10G055400 Glycine max HOM05D004760 ORTHO05D006114 3.8e-14 82.4 90 47.8
Medtr1g063230 Medicago truncatula HOM05D004760 ORTHO05D006114 6.4e-14 81.6 87 50.6
Phvul.007G219200 Phaseolus vulgaris HOM05D004760 ORTHO05D006114 1.1e-13 80.9 88 44.3
CsaV3_6G014220 Cucumis sativus L. HOM05D004760 ORTHO05D006114 2.4e-13 79.7 86 46.5
Psat6g074200 Pisum sativum HOM05D004760 ORTHO05D006114 4.2e-13 79.0 90 48.9
arahy.Tifrunner.gnm1.ann1.P1K6TB Arachis hypogaea HOM05D004760 ORTHO05D006114 4.6e-12 75.5 50 74.0
AUR62040351 Chenopodium quinoa HOM05D004760 ORTHO05D039006 4.6e-12 75.5 93 44.1
EL10Ac7g16630 Beta vulgaris HOM05D004760 ORTHO05D039006 7.9e-12 74.7 92 45.7
arahy.Tifrunner.gnm1.ann1.B7429M Arachis hypogaea HOM05D004760 ORTHO05D000042 3.9e-11 72.4 51 70.6
Sc20g0005490 Simmondsia chinensis HOM05D004760 ORTHO05D006114 6.7e-11 71.6 92 46.7
SEGI_39147 Sequoiadendron giganteum HOM05D004760 ORTHO05D006114 7.4e-10 68.2 77 45.5
MELO3C026909.2 Cucumis melo HOM05D004760 ORTHO05D006114 2.4e-08 63.2 39 79.5
Nn7g38187 Nelumbo nucifera HOM05D004760 ORTHO05D006114 1.5e-07 60.5 57 54.4
Lalb_Chr02g0155971 Lupinus albus HOM05D004760 ORTHO05D006114 7.6e-07 58.2 45 51.1


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