Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund12260 Selenicereus undatus HOM05D005773 ORTHO05D006930 2.0e-203 712.2 364 100.0
EL10Ac3g06235 Beta vulgaris HOM05D005773 ORTHO05D006930 3.9e-74 282.7 377 51.5
Ah.07g203560 Amaranthus hybridus HOM05D005773 ORTHO05D006930 4.2e-68 262.7 368 48.6
AUR62002540 Chenopodium quinoa HOM05D005773 ORTHO05D006930 6.7e-66 255.4 380 47.4
AUR62023652 Chenopodium quinoa HOM05D005773 ORTHO05D006930 2.6e-54 216.9 377 42.4
TAR633G1051 Trochodendron aralioides HOM05D005773 ORTHO05D006930 5.4e-47 192.6 394 40.4
Haze_00756 Corylus avellana HOM05D005773 ORTHO05D006930 4.5e-46 189.5 313 42.8
QL06p014502 Quercus lobata HOM05D005773 ORTHO05D006930 7.2e-44 182.2 387 37.5
MBI19_g30285_MAGBIO Magnolia biondii HOM05D005773 ORTHO05D006930 9.4e-44 181.8 369 37.7
Dinv24720 Davidia involucrata HOM05D005773 ORTHO05D006930 3.0e-42 176.8 389 37.3
Aqoxy2G02493 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 4.0e-42 176.4 386 38.3
Oeu012285.1 Olea europaea HOM05D005773 ORTHO05D006930 8.8e-42 175.3 395 39.5
MD13G1156700 Malus domestica HOM05D005773 ORTHO05D006930 1.5e-41 174.5 332 40.7
GSVIVG01017699001 Vitis vinifera HOM05D005773 ORTHO05D006930 2.6e-41 173.7 339 41.3
Gohir.A11G104400 Gossypium hirsutum HOM05D005773 ORTHO05D006930 4.4e-41 172.9 336 38.4
Gohir.D11G109200 Gossypium hirsutum HOM05D005773 ORTHO05D006930 7.5e-41 172.2 325 39.4
Gorai.007G116800 Gossypium raimondii HOM05D005773 ORTHO05D006930 7.5e-41 172.2 325 39.4
Manes.03G212700 Manihot esculenta HOM05D005773 ORTHO05D006930 2.8e-40 170.2 324 40.4
BcaB04g17451 Brassica carinata HOM05D005773 ORTHO05D006930 1.8e-39 167.5 371 37.2
FvH4_4g21650 Fragaria vesca HOM05D005773 ORTHO05D006930 1.8e-39 167.5 385 36.4
Nn4g25353 Nelumbo nucifera HOM05D005773 ORTHO05D006930 5.4e-39 166.0 388 35.8
Potri.010G003200 Populus trichocarpa HOM05D005773 ORTHO05D006930 2.0e-38 164.1 391 35.8
Sc25g0002150 Simmondsia chinensis HOM05D005773 ORTHO05D006930 2.0e-38 164.1 394 35.3
FAN07G0153 Fragaria x ananassa HOM05D005773 ORTHO05D006930 2.7e-38 163.7 389 36.8
FAN17G1594 Fragaria x ananassa HOM05D005773 ORTHO05D006930 2.7e-38 163.7 385 37.1
CSS0030034 Camellia sinensis var. sinensis HOM05D005773 ORTHO05D006930 5.9e-38 162.5 303 39.9
Actinidia18514 Actinidia chinensis HOM05D005773 ORTHO05D006930 7.7e-38 162.2 345 39.1
RcHm_v2.0_Chr4g0427881 Rosa chinensis HOM05D005773 ORTHO05D006930 2.3e-37 160.6 385 36.6
THA.LOC104802618 Tarenaya hassleriana HOM05D005773 ORTHO05D006930 2.3e-37 160.6 401 35.4
Prupe.1G103600 Prunus persica HOM05D005773 ORTHO05D006930 3.8e-37 159.8 388 35.3
Solyc12g098850.2 Solanum lycopersicum HOM05D005773 ORTHO05D006930 3.3e-36 156.8 401 36.4
Thecc.01G324900 Theobroma cacao HOM05D005773 ORTHO05D006930 3.3e-36 156.8 389 35.2
MD16G1134300 Malus domestica HOM05D005773 ORTHO05D006930 5.5e-36 156.0 399 34.1
Nn3g21943 Nelumbo nucifera HOM05D005773 ORTHO05D006930 7.2e-36 155.6 391 34.0
Sopen12g033600 Solanum pennellii HOM05D005773 ORTHO05D006930 2.8e-35 153.7 400 35.2
PGR004G1534 Punica granatum HOM05D005773 ORTHO05D006930 8.0e-35 152.1 370 33.8
PGSC0003DMG400004596 Solanum tuberosum HOM05D005773 ORTHO05D006930 8.0e-35 152.1 373 33.5
CARHR037910 Cardamine hirsuta HOM05D005773 ORTHO05D006930 1.0e-34 151.8 370 36.2
Aa31LG10G5470 Aethionema arabicum HOM05D005773 ORTHO05D006930 1.4e-34 151.4 375 34.7
MSTRG.13210 Avicennia marina HOM05D005773 ORTHO05D006930 1.8e-34 151.0 343 34.7
MSTRG.14719 Avicennia marina HOM05D005773 ORTHO05D006930 2.3e-34 150.6 333 36.9
Rhsim04G0249100 Rhododendron simsii HOM05D005773 ORTHO05D006930 5.2e-34 149.4 365 35.9
Duzib133G1161 Durio zibethinus HOM05D005773 ORTHO05D006930 1.2e-33 148.3 361 35.5
Nitab4.5_0000978g0060 Nicotiana tabacum HOM05D005773 ORTHO05D006930 1.5e-33 147.9 378 31.7
PSO210G3229 Papaver somniferum HOM05D005773 ORTHO05D006930 2.0e-33 147.5 349 37.0
Duzib138G1928 Durio zibethinus HOM05D005773 ORTHO05D006930 3.4e-33 146.7 375 34.1
A08p04910 Brassica napus HOM05D005773 ORTHO05D006930 7.5e-33 145.6 376 34.8
BraA08t32517Z Brassica rapa HOM05D005773 ORTHO05D006930 7.5e-33 145.6 376 34.8
Cpa.g.sc146.13 Carica papaya HOM05D005773 ORTHO05D006930 9.8e-33 145.2 362 35.6
TWI53G0973 Tripterygium wilfordii HOM05D005773 ORTHO05D006930 1.3e-32 144.8 319 38.6
Lsat_1_v5_gn_6_118320 Lactuca sativa HOM05D005773 ORTHO05D006930 1.7e-32 144.4 374 34.8
CiPaw.01G128000 Carya illinoinensis HOM05D005773 ORTHO05D006930 2.2e-32 144.1 275 38.9
BolC8t47338H Brassica oleracea HOM05D005773 ORTHO05D006930 4.9e-32 142.9 377 34.5
Lalb_Chr13g0299011 Lupinus albus HOM05D005773 ORTHO05D006930 4.9e-32 142.9 357 35.3
Nitab4.5_0012375g0020 Nicotiana tabacum HOM05D005773 ORTHO05D006930 6.3e-32 142.5 382 32.2
Cfa015740 Carpinus fangiana HOM05D005773 ORTHO05D006930 8.3e-32 142.1 265 39.2
Lj4g0014107 Lotus japonicus HOM05D005773 ORTHO05D006930 8.3e-32 142.1 319 37.3
AT1G48300 Arabidopsis thaliana HOM05D005773 ORTHO05D006930 1.1e-31 141.7 369 34.1
HanXRQChr05g0148961 Helianthus annuus HOM05D005773 ORTHO05D006930 1.1e-31 141.7 321 34.3
Ciclev10005574m.g Citrus clementina HOM05D005773 ORTHO05D006930 1.8e-31 141.0 279 39.8
C08p05240 Brassica napus HOM05D005773 ORTHO05D006930 4.1e-31 139.8 379 34.6
SalBow7G0248 Salvia bowleyana HOM05D005773 ORTHO05D006930 4.1e-31 139.8 334 34.4
Medtr4g124080 Medicago truncatula HOM05D005773 ORTHO05D006930 5.4e-31 139.4 327 34.9
SalBow7G4520 Salvia bowleyana HOM05D005773 ORTHO05D006930 5.4e-31 139.4 334 34.4
CAN.G484.97 Capsicum annuum HOM05D005773 ORTHO05D006930 9.2e-31 138.7 373 33.0
Nn3g21941 Nelumbo nucifera HOM05D005773 ORTHO05D006930 1.2e-30 138.3 355 34.9
AL1G54900 Arabidopsis lyrata HOM05D005773 ORTHO05D006930 2.7e-30 137.1 369 33.6
Sabra10G0002700 Salix brachista HOM05D005773 ORTHO05D006930 2.7e-30 137.1 386 32.1
Ca_21368_v3 Cicer arietinum L. HOM05D005773 ORTHO05D006930 3.5e-30 136.7 324 34.9
CANSAT78G1256 Cannabis sativa HOM05D005773 ORTHO05D006930 7.8e-30 135.6 340 34.7
Peaxi162Scf00323g00817 Petunia axillaris HOM05D005773 ORTHO05D006930 7.8e-30 135.6 374 34.2
CDE09G0185 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 1.0e-29 135.2 383 33.2
Eucgr.H04131 Eucalyptus grandis HOM05D005773 ORTHO05D006930 1.7e-29 134.4 389 34.7
TPR.G12556 Trifolium pratense HOM05D005773 ORTHO05D006930 3.9e-29 133.3 327 33.9
Migut.H01460 Erythranthe guttata HOM05D005773 ORTHO05D006930 5.0e-29 132.9 331 33.2
Actinidia01071 Actinidia chinensis HOM05D005773 ORTHO05D006930 2.5e-28 130.6 266 37.2
CDE02G3050 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 2.5e-28 130.6 328 31.7
Potri.002G187300 Populus trichocarpa HOM05D005773 ORTHO05D006930 2.5e-28 130.6 325 35.4
Psat0s1206g0160 Pisum sativum HOM05D005773 ORTHO05D006930 7.3e-28 129.0 325 34.2
Carub.0001s3743 Capsella rubella HOM05D005773 ORTHO05D006930 1.6e-27 127.9 318 35.5
SGA_v2.0_scaffold109G31080 Striga asiatica HOM05D005773 ORTHO05D006930 2.1e-27 127.5 327 34.6
ECA246G2714 Erigeron canadensis HOM05D005773 ORTHO05D006930 8.0e-27 125.6 300 32.3
Manes.01G234700 Manihot esculenta HOM05D005773 ORTHO05D006930 1.4e-26 124.8 316 32.9
Cc03_g00040 Coffea canephora HOM05D005773 ORTHO05D006930 1.8e-26 124.4 302 31.8
Thhalv10011577m.g Eutrema salsugineum HOM05D005773 ORTHO05D006930 2.3e-26 124.0 321 32.4
Glyma.13G118300 Glycine max HOM05D005773 ORTHO05D006930 5.2e-26 122.9 371 32.3
COL.COLO4_23133 Corchorus olitorius HOM05D005773 ORTHO05D006930 6.8e-26 122.5 332 31.6
arahy.Tifrunner.gnm1.ann1.YBC12K Arachis hypogaea HOM05D005773 ORTHO05D006930 1.2e-25 121.7 351 32.8
Sp1g35250 Schrenkiella parvula HOM05D005773 ORTHO05D006930 1.2e-25 121.7 382 32.2
Aqoxy2G02494 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 2.0e-25 120.9 354 31.6
Phvul.003G123000 Phaseolus vulgaris HOM05D005773 ORTHO05D006930 2.6e-25 120.6 321 34.0
Atru.chr5.865 Acer truncatum HOM05D005773 ORTHO05D006930 2.2e-24 117.5 234 38.0
arahy.Tifrunner.gnm1.ann1.AWA2M3 Arachis hypogaea HOM05D000254 ORTHO05D000165 2.9e-24 117.1 190 40.5
BcaC07g37153 Brassica carinata HOM05D005773 ORTHO05D006930 1.1e-23 115.2 359 33.1
CsaV3_3G015560 Cucumis sativus L. HOM05D005773 ORTHO05D006930 1.9e-23 114.4 336 33.6
unitig_26.g9353 Utricularia gibba HOM05D005773 ORTHO05D006930 3.2e-23 113.6 397 30.5
arahy.Tifrunner.gnm1.ann1.F7JGYB Arachis hypogaea HOM05D005773 ORTHO05D006930 1.6e-22 111.3 249 35.3
VMungo1215G1523 Vigna mungo HOM05D005773 ORTHO05D006930 3.5e-22 110.2 317 32.2
ATR0796G282 Amborella trichopoda HOM05D005773 ORTHO05D006930 7.8e-22 109.0 401 30.9
arahy.Tifrunner.gnm1.ann1.RWG9MN Arachis hypogaea HOM05D005773 ORTHO05D006930 2.3e-21 107.5 317 32.2
Sed0002380 Sechium edule HOM05D005773 ORTHO05D006930 2.3e-21 107.5 335 32.8
arahy.Tifrunner.gnm1.ann1.9W2SDJ Arachis hypogaea HOM05D005773 ORTHO05D006930 3.0e-21 107.1 315 30.8
Os05g0137300 Oryza sativa ssp. japonica HOM05D005773 ORTHO05D006930 5.0e-21 106.3 198 36.9
Glyma.17G041600 Glycine max HOM05D005773 ORTHO05D006930 2.5e-20 104.0 322 32.9
Hma1.2p1_1449F.1_g284070 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 5.6e-20 102.8 341 32.8
MELO3C006755.2 Cucumis melo HOM05D005773 ORTHO05D006930 1.8e-18 97.8 337 31.5
Sed0009476 Sechium edule HOM05D005773 ORTHO05D006930 1.8e-18 97.8 360 31.1
ClCG05G006890 Citrullus lanatus HOM05D005773 ORTHO05D006930 3.1e-18 97.1 377 30.8
Ciclev10020833m.g Citrus clementina HOM05D005773 ORTHO05D006930 1.5e-17 94.7 311 32.2
Zm00001eb417470 Zea mays HOM05D005773 ORTHO05D006930 3.2e-15 87.0 190 33.7
arahy.Tifrunner.gnm1.ann1.EN1MLR Arachis hypogaea HOM05D005773 ORTHO05D006930 1.0e-13 82.0 283 29.3
Atru.chr4.3177 Acer truncatum HOM05D005773 ORTHO05D006930 3.0e-13 80.5 208 35.1
HPP92_012765 Vanilla planifolia HOM05D005773 ORTHO05D006930 1.4e-10 71.6 335 26.9
Aqoxy1G03305 Aquilegia oxysepala HOM05D006996 ORTHO05D008961 8.9e-10 68.9 164 37.2
Mapoly0035s0141 Marchantia polymorpha HOM05D005773 ORTHO05D006930 8.9e-10 68.9 94 36.2
Hma1.2p1_1067F.1_g253800 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 3.4e-09 67.0 398 25.4
Atru.chr9.2474 Acer truncatum HOM05D000366 ORTHO05D001950 1.3e-08 65.1 71 49.3
CARHR041400 Cardamine hirsuta HOM05D005773 ORTHO05D006930 3.7e-08 63.5 48 58.3
Aqoxy1G04021 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 4.9e-08 63.2 76 52.6
Pp3c14_16980 Physcomitrium patens HOM05D029403 ORTHO05D006930 6.4e-08 62.8 87 36.8
Pp3c17_20330 Physcomitrium patens HOM05D029403 ORTHO05D006930 8.4e-08 62.4 111 30.6
SEGI_24223 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 8.4e-08 62.4 317 25.6
SEGI_38196 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 8.4e-08 62.4 317 26.2
TAR625G0572 Trochodendron aralioides HOM05D005773 ORTHO05D006930 1.4e-07 61.6 48 62.5
FAN07G1029 Fragaria x ananassa HOM05D005773 ORTHO05D006930 5.4e-07 59.7 169 36.7
Aqoxy7G02275 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 2.7e-06 57.4 136 37.5
SMO356G0556 Selaginella moellendorffii HOM05D005773 ORTHO05D006930 3.5e-06 57.0 96 35.4


User provided reference genes

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