Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund12233 Selenicereus undatus HOM05D003628 ORTHO05D004253 5.6e-84 314.3 166 100.0
AUR62002607 Chenopodium quinoa HOM05D003628 ORTHO05D004253 4.6e-30 135.2 115 69.6
AUR62030025 Chenopodium quinoa HOM05D003628 ORTHO05D004253 5.1e-29 131.7 115 69.6
Ah.07g204120 Amaranthus hybridus HOM05D003628 ORTHO05D004253 1.4e-26 123.6 115 63.5
Sc19g0002160 Simmondsia chinensis HOM05D003628 ORTHO05D004253 2.6e-25 119.4 99 66.7
Cpa.g.sc59.56 Carica papaya HOM05D003628 ORTHO05D004253 6.5e-24 114.8 115 58.3
EL10Ac3g06305 Beta vulgaris HOM05D003628 ORTHO05D004253 1.9e-23 113.2 107 62.6
Sabra08G0133300 Salix brachista HOM05D003628 ORTHO05D004253 5.5e-23 111.7 139 48.9
SGA_v2.0_scaffold57G20181 Striga asiatica HOM05D003628 ORTHO05D004253 1.6e-22 110.2 117 52.1
ClCG06G007410 Citrullus lanatus HOM05D003628 ORTHO05D004253 7.9e-22 107.8 120 53.3
Gohir.D02G032600 Gossypium hirsutum HOM05D003628 ORTHO05D004253 3.9e-21 105.5 116 54.3
Gorai.005G036000 Gossypium raimondii HOM05D003628 ORTHO05D004253 5.1e-21 105.1 116 54.3
Gohir.A02G025400 Gossypium hirsutum HOM05D003628 ORTHO05D004253 6.7e-21 104.8 116 52.6
VMungo0720G2372 Vigna mungo HOM05D003628 ORTHO05D004253 8.7e-21 104.4 142 44.4
TWI09G0941 Tripterygium wilfordii HOM05D003628 ORTHO05D004253 1.1e-20 104.0 119 54.6
Gorai.006G218800 Gossypium raimondii HOM05D003628 ORTHO05D004253 3.3e-20 102.4 107 57.0
Dinv27142 Davidia involucrata HOM05D003628 ORTHO05D004253 4.3e-20 102.1 98 61.2
HanXRQChr12g0359881 Helianthus annuus HOM05D003628 ORTHO05D004253 5.7e-20 101.7 98 62.2
MBI05_g37047_MAGBIO Magnolia biondii HOM05D003628 ORTHO05D004253 5.7e-20 101.7 97 61.9
Gohir.D09G195400 Gossypium hirsutum HOM05D003628 ORTHO05D004253 7.4e-20 101.3 107 57.0
Sabra10G0044300 Salix brachista HOM05D006620 ORTHO05D008921 9.7e-20 100.9 174 39.7
Atru.chr4.1847 Acer truncatum HOM05D003628 ORTHO05D004253 1.3e-19 100.5 121 52.1
Duzib151G0300 Durio zibethinus HOM05D003628 ORTHO05D004253 2.2e-19 99.8 107 56.1
Dinv29776 Davidia involucrata HOM05D003628 ORTHO05D004253 2.8e-19 99.4 76 69.7
Gohir.A09G201200 Gossypium hirsutum HOM05D003628 ORTHO05D004253 3.7e-19 99.0 106 55.7
TWI73G0229 Tripterygium wilfordii HOM05D003628 ORTHO05D004253 3.7e-19 99.0 121 50.4
Hma1.2p1_0574F.1_g181510 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 4.8e-19 98.6 89 60.7
Duzib212G0614 Durio zibethinus HOM05D003628 ORTHO05D004253 8.2e-19 97.8 108 53.7
Cc03_g07010 Coffea canephora HOM05D003628 ORTHO05D004253 1.1e-18 97.4 97 57.7
GSVIVG01029001001 Vitis vinifera HOM05D003628 ORTHO05D004253 1.4e-18 97.1 76 72.4
Thecc.04G217100 Theobroma cacao HOM05D003628 ORTHO05D004253 1.8e-18 96.7 107 53.3
QL06p022355 Quercus lobata HOM05D003628 ORTHO05D004253 2.4e-18 96.3 97 57.7
HanXRQChr10g0311151 Helianthus annuus HOM05D003628 ORTHO05D004253 3.1e-18 95.9 95 58.9
Hma1.2p1_1241F.1_g269760 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 3.1e-18 95.9 107 52.3
Nn1g03063 Nelumbo nucifera HOM05D003628 ORTHO05D004253 3.1e-18 95.9 81 66.7
TAR362G1171 Trochodendron aralioides HOM05D003628 ORTHO05D004253 3.1e-18 95.9 78 65.4
Hma1.2p1_0112F.1_g055040 Hydrangea macrophylla HOM05D003628 ORTHO05D004253 4.1e-18 95.5 137 46.7
Nn3g19840 Nelumbo nucifera HOM05D003628 ORTHO05D004253 5.3e-18 95.1 98 58.2
PSO832G4023 Papaver somniferum HOM05D003628 ORTHO05D004253 5.3e-18 95.1 80 65.0
ECA234G0302 Erigeron canadensis HOM05D003628 ORTHO05D004253 6.9e-18 94.7 82 68.3
Aqoxy1G00125 Aquilegia oxysepala HOM05D003628 ORTHO05D004253 9.0e-18 94.4 84 63.1
Lsat_1_v5_gn_5_148361 Lactuca sativa HOM05D003628 ORTHO05D004253 1.2e-17 94.0 101 56.4
Potri.008G174800 Populus trichocarpa HOM05D003628 ORTHO05D004253 1.2e-17 94.0 85 63.5
Potri.010G062000 Populus trichocarpa HOM05D003628 ORTHO05D004253 1.2e-17 94.0 76 67.1
Rhsim02G0049400 Rhododendron simsii HOM05D003628 ORTHO05D004253 1.2e-17 94.0 76 68.4
Actinidia39943 Actinidia chinensis HOM05D003628 ORTHO05D004253 2.0e-17 93.2 76 64.5
CiPaw.01G174500 Carya illinoinensis HOM05D003628 ORTHO05D004253 3.4e-17 92.4 76 65.8
THA.LOC104821624 Tarenaya hassleriana HOM05D003628 ORTHO05D004253 3.4e-17 92.4 75 64.0
CSS0021427 Camellia sinensis var. sinensis HOM05D003628 ORTHO05D004253 4.5e-17 92.0 75 66.7
Aa31LG8G10920 Aethionema arabicum HOM05D003628 ORTHO05D004253 7.7e-17 91.3 151 40.4
DCAR_027362 Daucus carota HOM05D003628 ORTHO05D004253 7.7e-17 91.3 87 57.5
TAR633G2428 Trochodendron aralioides HOM05D003628 ORTHO05D004253 1.0e-16 90.9 104 51.9
Manes.15G048200 Manihot esculenta HOM05D003628 ORTHO05D004253 1.3e-16 90.5 76 64.5
CiPaw.02G103800 Carya illinoinensis HOM05D003628 ORTHO05D004253 1.7e-16 90.1 76 65.8
Ciclev10004333m.g Citrus clementina HOM05D003628 ORTHO05D004253 1.7e-16 90.1 79 65.8
CsaV3_2G012280 Cucumis sativus L. HOM05D003628 ORTHO05D004253 1.7e-16 90.1 80 61.2
PSO764G0031 Papaver somniferum HOM05D003628 ORTHO05D004253 1.7e-16 90.1 80 61.2
Peaxi162Scf01007g00014 Petunia axillaris HOM05D003628 ORTHO05D004253 2.2e-16 89.7 77 62.3
Sed0002438 Sechium edule HOM05D003628 ORTHO05D004253 2.9e-16 89.4 80 58.8
Solyc09g091120.3 Solanum lycopersicum HOM05D003628 ORTHO05D004253 2.9e-16 89.4 77 62.3
Sopen09g034100 Solanum pennellii HOM05D003628 ORTHO05D004253 2.9e-16 89.4 77 62.3
TAR365G0848 Trochodendron aralioides HOM05D003628 ORTHO05D004253 2.9e-16 89.4 74 67.6
Nitab4.5_0000451g0120 Nicotiana tabacum HOM05D003628 ORTHO05D004253 3.8e-16 89.0 77 62.3
Nitab4.5_0001998g0040 Nicotiana tabacum HOM05D003628 ORTHO05D004253 3.8e-16 89.0 79 62.0
PGR142G1422 Punica granatum HOM05D003628 ORTHO05D004253 3.8e-16 89.0 85 55.3
CANSAT78G2050 Cannabis sativa HOM05D003628 ORTHO05D004253 5.0e-16 88.6 76 61.8
CSS0020381 Camellia sinensis var. sinensis HOM05D003628 ORTHO05D004253 6.5e-16 88.2 76 64.5
Nitab4.5_0002738g0080 Nicotiana tabacum HOM05D003628 ORTHO05D004253 6.5e-16 88.2 79 59.5
RcHm_v2.0_Chr4g0396341 Rosa chinensis HOM05D003628 ORTHO05D004253 6.5e-16 88.2 76 59.2
MELO3C023064.2 Cucumis melo HOM05D003628 ORTHO05D004253 8.5e-16 87.8 80 58.8
Gohir.D10G146700 Gossypium hirsutum HOM05D003628 ORTHO05D004253 8.5e-16 87.8 74 64.9
Gorai.011G164000 Gossypium raimondii HOM05D003628 ORTHO05D004253 8.5e-16 87.8 74 64.9
Lj6g0006649 Lotus japonicus HOM05D003628 ORTHO05D004253 8.5e-16 87.8 101 50.5
FvH4_4g05311 Fragaria vesca HOM05D003628 ORTHO05D004253 1.1e-15 87.4 76 60.5
FAN12G2520 Fragaria x ananassa HOM05D003628 ORTHO05D004253 1.1e-15 87.4 76 60.5
Glyma.20G079600 Glycine max HOM05D003628 ORTHO05D004253 1.1e-15 87.4 76 59.2
MD16G1232700 Malus domestica HOM05D003628 ORTHO05D004253 1.1e-15 87.4 77 59.7
FAN07G2212 Fragaria x ananassa HOM05D003628 ORTHO05D004253 1.4e-15 87.0 76 60.5
THA.LOC104804570 Tarenaya hassleriana HOM05D003628 ORTHO05D004253 1.4e-15 87.0 88 52.3
Oeu012942.2 Olea europaea HOM05D003628 ORTHO05D004253 1.9e-15 86.7 83 59.0
Prupe.1G054700 Prunus persica HOM05D003628 ORTHO05D004253 1.9e-15 86.7 107 50.5
FAN22G0313 Fragaria x ananassa HOM05D003628 ORTHO05D004253 2.5e-15 86.3 76 59.2
Zm00001eb143670 Zea mays HOM05D003628 ORTHO05D004253 2.5e-15 86.3 78 60.3
Haze_11526 Corylus avellana HOM05D003628 ORTHO05D004253 3.2e-15 85.9 76 61.8
Sed0008500 Sechium edule HOM05D003628 ORTHO05D004253 3.2e-15 85.9 80 57.5
HPP92_026454 Vanilla planifolia HOM05D003628 ORTHO05D004253 3.2e-15 85.9 105 48.6
CAN.G566.2 Capsicum annuum HOM05D003628 ORTHO05D004253 4.2e-15 85.5 79 58.2
Glyma.10G128350 Glycine max HOM05D003628 ORTHO05D004253 4.2e-15 85.5 76 59.2
Manes.03G155400 Manihot esculenta HOM05D003628 ORTHO05D004253 4.2e-15 85.5 96 53.1
Phvul.007G238700 Phaseolus vulgaris HOM05D003628 ORTHO05D004253 5.5e-15 85.1 85 54.1
Zm00001eb365010 Zea mays HOM05D003628 ORTHO05D004253 5.5e-15 85.1 80 56.2
Cfa014840 Carpinus fangiana HOM05D003628 ORTHO05D004253 7.2e-15 84.7 76 60.5
Lalb_Chr01g0011261 Lupinus albus HOM05D003628 ORTHO05D004253 7.2e-15 84.7 85 54.1
BcaC06g35665 Brassica carinata HOM05D003628 ORTHO05D004253 1.2e-14 84.0 78 57.7
BcaC06g35667 Brassica carinata HOM05D003628 ORTHO05D004253 1.2e-14 84.0 78 57.7
A07p08160 Brassica napus HOM05D003628 ORTHO05D004253 1.2e-14 84.0 78 57.7
C07p12290 Brassica napus HOM05D003628 ORTHO05D004253 1.2e-14 84.0 78 57.7
C07p12320 Brassica napus HOM05D003628 ORTHO05D004253 1.2e-14 84.0 78 57.7
BraA07t28601Z Brassica rapa HOM05D003628 ORTHO05D004253 1.2e-14 84.0 78 57.7
Sopen12g032860 Solanum pennellii HOM05D003628 ORTHO05D004253 1.2e-14 84.0 79 57.0
HPP92_014197 Vanilla planifolia HOM05D003628 ORTHO05D004253 1.2e-14 84.0 79 59.5
MSTRG.4198 Avicennia marina HOM05D003628 ORTHO05D004253 1.6e-14 83.6 75 58.7
BcaB06g26600 Brassica carinata HOM05D003628 ORTHO05D004253 1.6e-14 83.6 110 47.3
ATR0580G379 Amborella trichopoda HOM05D003628 ORTHO05D004253 2.1e-14 83.2 76 59.2
arahy.Tifrunner.gnm1.ann1.STBA65 Arachis hypogaea HOM05D003628 ORTHO05D004253 2.7e-14 82.8 76 56.6
CAN.G812.46 Capsicum annuum HOM05D003628 ORTHO05D004253 2.7e-14 82.8 79 57.0
Sp3g21980 Schrenkiella parvula HOM05D003628 ORTHO05D004253 2.7e-14 82.8 87 52.9
arahy.Tifrunner.gnm1.ann1.7KG1FV Arachis hypogaea HOM05D003628 ORTHO05D004253 3.6e-14 82.4 76 55.3
Ca_11787_v3 Cicer arietinum L. HOM05D003628 ORTHO05D004253 3.6e-14 82.4 123 42.3
Os01g0911800 Oryza sativa ssp. japonica HOM05D003628 ORTHO05D004253 3.6e-14 82.4 80 53.8
BcaB04g20394 Brassica carinata HOM05D003628 ORTHO05D004253 4.6e-14 82.0 78 57.7
BolC7t41696H Brassica oleracea HOM05D003628 ORTHO05D004253 4.6e-14 82.0 78 56.4
Eucgr.H00111 Eucalyptus grandis HOM05D003628 ORTHO05D004253 4.6e-14 82.0 73 60.3
TPR.G23641 Trifolium pratense HOM05D003628 ORTHO05D004253 4.6e-14 82.0 71 60.6
Lalb_Chr19g0128621 Lupinus albus HOM05D003628 ORTHO05D004253 6.1e-14 81.6 81 54.3
Oeu023151.1 Olea europaea HOM05D003628 ORTHO05D004253 6.1e-14 81.6 77 58.4
Solyc12g097070.3 Solanum lycopersicum HOM05D003628 ORTHO05D004253 6.1e-14 81.6 79 55.7
BcaC01g03342 Brassica carinata HOM05D003628 ORTHO05D004253 7.9e-14 81.3 76 59.2
A03p43510 Brassica napus HOM05D003628 ORTHO05D004253 7.9e-14 81.3 76 59.2
C03p53470 Brassica napus HOM05D003628 ORTHO05D004253 7.9e-14 81.3 76 59.2
BolC3t17608H Brassica oleracea HOM05D003628 ORTHO05D004253 7.9e-14 81.3 76 59.2
BraA03t13490Z Brassica rapa HOM05D003628 ORTHO05D004253 7.9e-14 81.3 76 59.2
unitig_748.g7341 Utricularia gibba HOM05D003628 ORTHO05D004253 7.9e-14 81.3 74 59.5
BcaB03g14597 Brassica carinata HOM05D003628 ORTHO05D004253 1.0e-13 80.9 85 51.8
Migut.G00600 Erythranthe guttata HOM05D003628 ORTHO05D004253 1.0e-13 80.9 74 60.8
Peaxi162Scf00047g00163 Petunia axillaris HOM05D003628 ORTHO05D004253 1.0e-13 80.9 75 57.3
Lalb_Chr03g0036821 Lupinus albus HOM05D003628 ORTHO05D004253 2.3e-13 79.7 85 54.1
Psat6g109680 Pisum sativum HOM05D003628 ORTHO05D004253 2.3e-13 79.7 71 59.2
CDE07G1740 Ceratophyllum demersum HOM05D003628 ORTHO05D004253 8.8e-13 77.8 74 58.1
Mapoly0068s0063 Marchantia polymorpha HOM05D003628 ORTHO05D004253 8.8e-13 77.8 75 57.3
Medtr1g046350 Medicago truncatula HOM05D003628 ORTHO05D004253 1.1e-12 77.4 71 57.7
vmacro15908 Vaccinium macrocarpon HOM05D003628 ORTHO05D004253 1.5e-12 77.0 97 50.5
SEGI_10173 Sequoiadendron giganteum HOM05D003628 ORTHO05D004253 1.3e-11 73.9 73 60.3
AagrBONN_evm.TU.Sc2ySwM_362.1684 Anthoceros agrestis HOM05D003628 ORTHO05D004253 6.5e-08 61.6 73 46.6
AT3G23980 Arabidopsis thaliana HOM05D003628 ORTHO05D004253 1.4e-07 60.5 72 47.2
SMO116G0337 Selaginella moellendorffii HOM05D003628 ORTHO05D004253 1.4e-07 60.5 69 50.7
CBR_g38414 Chara braunii HOM05D003628 ORTHO05D004253 5.5e-07 58.5 75 42.7
Pp3c24_10590 Physcomitrium patens HOM05D003628 ORTHO05D004253 2.7e-06 56.2 75 42.7
Carub.0003s2454 Capsella rubella HOM05D003628 ORTHO05D004253 4.7e-06 55.5 86 39.5
AL3G39530 Arabidopsis lyrata HOM05D003628 ORTHO05D004253 6.1e-06 55.1 72 43.1


User provided reference genes

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