Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund12119 Selenicereus undatus HOM05D007633 ORTHO05D008817 7.2e-131 470.7 256 100.0
Ah.04g154590 Amaranthus hybridus HOM05D007633 ORTHO05D008817 2.5e-51 206.5 228 47.4
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 8.1e-42 174.9 239 39.7
AUR62034710 Chenopodium quinoa HOM05D007633 ORTHO05D008817 1.7e-39 167.2 177 45.8
Gohir.A09G053600 Gossypium hirsutum HOM05D007633 ORTHO05D008817 3.3e-35 152.9 229 38.0
Hma1.2p1_0745F.1_g212150 Hydrangea macrophylla HOM05D007633 ORTHO05D008817 4.8e-34 149.1 219 36.5
PGR004G0463 Punica granatum HOM05D007633 ORTHO05D008817 4.8e-34 149.1 243 37.4
Gorai.006G055000 Gossypium raimondii HOM05D007633 ORTHO05D008817 1.8e-33 147.1 235 37.9
Ciclev10005651m.g Citrus clementina HOM05D007633 ORTHO05D008817 4.0e-33 146.0 235 35.3
Gohir.D09G053050 Gossypium hirsutum HOM05D007633 ORTHO05D008817 9.0e-33 144.8 229 38.0
QL06p002095 Quercus lobata HOM05D007633 ORTHO05D008817 1.2e-32 144.4 232 34.9
EL10Ac3g06495 Beta vulgaris HOM05D007633 ORTHO05D008817 1.5e-32 144.1 230 39.6
FAN22G0362 Fragaria x ananassa HOM05D007633 ORTHO05D008817 2.0e-32 143.7 250 37.2
CANSAT78G1135 Cannabis sativa HOM05D007633 ORTHO05D008817 3.4e-32 142.9 246 34.1
Atru.chr4.2449 Acer truncatum HOM05D007633 ORTHO05D008817 5.8e-32 142.1 237 34.2
RcHm_v2.0_Chr4g0415951 Rosa chinensis HOM05D007633 ORTHO05D008817 5.8e-32 142.1 246 36.2
CSS0018565 Camellia sinensis var. sinensis HOM05D007633 ORTHO05D008817 1.3e-31 141.0 167 41.3
AUR62043551 Chenopodium quinoa HOM05D007633 ORTHO05D008817 1.3e-31 141.0 174 43.1
Rhsim02G0025900 Rhododendron simsii HOM05D007633 ORTHO05D008817 1.3e-31 141.0 187 39.0
TAR636G0739 Trochodendron aralioides HOM05D007633 ORTHO05D008817 1.3e-31 141.0 215 33.0
Cfa015662 Carpinus fangiana HOM05D007633 ORTHO05D008817 3.8e-31 139.4 237 33.8
FAN02G3335 Fragaria x ananassa HOM05D007633 ORTHO05D008817 8.4e-31 138.3 248 34.3
Haze_00885 Corylus avellana HOM05D007633 ORTHO05D008817 1.4e-30 137.5 237 33.3
Dinv14003 Davidia involucrata HOM05D007633 ORTHO05D008817 3.2e-30 136.3 207 35.3
FvH4_4g16290 Fragaria vesca HOM05D007633 ORTHO05D008817 4.2e-30 136.0 250 36.0
FAN12G0707 Fragaria x ananassa HOM05D007633 ORTHO05D008817 4.2e-30 136.0 250 36.0
Eucgr.H03451 Eucalyptus grandis HOM05D007633 ORTHO05D008817 5.5e-30 135.6 241 32.0
Psat4g209480 Pisum sativum HOM05D007633 ORTHO05D008817 1.2e-29 134.4 256 32.4
Actinidia36954 Actinidia chinensis HOM05D007633 ORTHO05D008817 1.6e-29 134.0 218 35.8
Glyma.11G006100 Glycine max HOM05D007633 ORTHO05D008817 2.1e-29 133.7 225 34.7
Manes.03G177200 Manihot esculenta HOM05D007633 ORTHO05D008817 6.0e-29 132.1 217 33.2
GSVIVG01017995001 Vitis vinifera HOM05D007633 ORTHO05D008817 7.9e-29 131.7 220 31.8
Nn1g02349 Nelumbo nucifera HOM05D007633 ORTHO05D008817 1.0e-28 131.3 215 32.6
Prupe.1G015500 Prunus persica HOM05D007633 ORTHO05D008817 1.0e-28 131.3 170 40.6
Aqoxy2G03409 Aquilegia oxysepala HOM05D007633 ORTHO05D008817 2.3e-28 130.2 203 35.0
MELO3C006526.2 Cucumis melo HOM05D007633 ORTHO05D008817 2.3e-28 130.2 222 34.2
MSTRG.21860 Avicennia marina HOM05D007633 ORTHO05D008817 3.9e-28 129.4 237 31.2
Ca_24403_v3 Cicer arietinum L. HOM05D007633 ORTHO05D008817 6.7e-28 128.6 242 32.6
Medtr5g006410 Medicago truncatula HOM05D007633 ORTHO05D008817 1.1e-27 127.9 229 32.8
Oeu011618.1 Olea europaea HOM05D007633 ORTHO05D008817 1.9e-27 127.1 227 31.7
Sed0010969 Sechium edule HOM05D007633 ORTHO05D008817 1.9e-27 127.1 227 33.0
ATR0697G107 Amborella trichopoda HOM05D007633 ORTHO05D008817 5.6e-27 125.6 198 34.8
Cc03_g03920 Coffea canephora HOM05D007633 ORTHO05D008817 7.4e-27 125.2 228 36.0
Potri.008G154200 Populus trichocarpa HOM05D007633 ORTHO05D008817 7.4e-27 125.2 215 31.6
Potri.010G086300 Populus trichocarpa HOM05D007633 ORTHO05D008817 7.4e-27 125.2 227 33.0
CsaV3_3G013230 Cucumis sativus L. HOM05D007633 ORTHO05D008817 1.3e-26 124.4 234 33.3
Nitab4.5_0001342g0010 Nicotiana tabacum HOM05D007633 ORTHO05D008817 2.1e-26 123.6 215 34.4
TPR.G38043 Trifolium pratense HOM05D007633 ORTHO05D008817 3.7e-26 122.9 240 32.5
Sabra10G0057400 Salix brachista HOM05D007633 ORTHO05D008817 4.8e-26 122.5 227 32.6
Glyma.01G237200 Glycine max HOM05D007633 ORTHO05D008817 1.1e-25 121.3 212 32.5
LjContig00408g0001251 Lotus japonicus HOM05D007633 ORTHO05D008817 1.1e-25 121.3 238 30.7
Thecc.04G233700 Theobroma cacao HOM05D007633 ORTHO05D008817 1.8e-25 120.6 232 31.0
PGSC0003DMG400032254 Solanum tuberosum HOM05D007633 ORTHO05D008817 3.1e-25 119.8 218 32.1
Nitab4.5_0008118g0020 Nicotiana tabacum HOM05D007633 ORTHO05D008817 6.9e-25 118.6 209 31.6
Solyc09g082160.4 Solanum lycopersicum HOM05D007633 ORTHO05D008817 6.9e-25 118.6 218 31.7
Sopen09g031040 Solanum pennellii HOM05D007633 ORTHO05D008817 3.4e-24 116.3 218 31.2
HanXRQChr02g0035611 Helianthus annuus HOM05D007633 ORTHO05D008817 1.3e-23 114.4 174 36.8
Phvul.002G044600 Phaseolus vulgaris HOM05D007633 ORTHO05D008817 8.4e-23 111.7 224 33.5
Sopen06g019290 Solanum pennellii HOM05D007633 ORTHO05D008817 8.4e-23 111.7 149 35.6
MD16G1195500 Malus domestica HOM05D007633 ORTHO05D008817 1.4e-22 110.9 218 31.7
Duzib212G0599 Durio zibethinus HOM05D007633 ORTHO05D008817 7.1e-22 108.6 174 36.2
PSO761G0330 Papaver somniferum HOM05D007633 ORTHO05D008817 1.6e-21 107.5 223 32.3
Lalb_Chr01g0013131 Lupinus albus HOM05D007633 ORTHO05D008817 2.1e-21 107.1 223 30.5
Peaxi162Scf00192g01119 Petunia axillaris HOM05D007633 ORTHO05D008817 2.1e-21 107.1 162 34.0
ECA240G3784 Erigeron canadensis HOM05D000137 ORTHO05D000452 3.5e-21 106.3 148 37.2
Peaxi162Scf00092g00615 Petunia axillaris HOM05D007633 ORTHO05D008817 3.5e-21 106.3 218 31.2
PSO210G6592 Papaver somniferum HOM05D007633 ORTHO05D008817 1.0e-20 104.8 162 34.0
vmacro15349 Vaccinium macrocarpon HOM05D007633 ORTHO05D008817 3.0e-20 103.2 235 27.2
TWI73G0352 Tripterygium wilfordii HOM05D007633 ORTHO05D008817 6.7e-20 102.1 230 30.4
PSO210G0191 Papaver somniferum HOM05D007633 ORTHO05D008817 1.1e-19 101.3 210 30.0
Migut.N00191 Erythranthe guttata HOM05D007633 ORTHO05D008817 1.5e-19 100.9 226 30.5
Solyc06g054140.4 Solanum lycopersicum HOM05D007633 ORTHO05D008817 1.9e-19 100.5 149 33.6
Nitab4.5_0000321g0150 Nicotiana tabacum HOM05D007633 ORTHO05D008817 2.5e-19 100.1 191 31.4
PSO761G0485 Papaver somniferum HOM05D007633 ORTHO05D008817 4.3e-19 99.4 211 28.9
CDE07G1037 Ceratophyllum demersum HOM05D007633 ORTHO05D008817 3.7e-18 96.3 146 33.6
Lsat_1_v5_gn_7_64401 Lactuca sativa HOM05D007633 ORTHO05D008817 4.8e-18 95.9 166 31.9
CiPaw.01G167500 Carya illinoinensis HOM05D007633 ORTHO05D008817 6.3e-18 95.5 144 36.1
HPP92_006116 Vanilla planifolia HOM05D007633 ORTHO05D008817 8.2e-18 95.1 230 28.7
VMungo1215G1793 Vigna mungo HOM05D007633 ORTHO05D008817 5.3e-17 92.4 236 28.4
Nitab4.5_0001920g0040 Nicotiana tabacum HOM05D007633 ORTHO05D008817 9.0e-17 91.7 167 34.1
ClCG05G005110 Citrullus lanatus HOM05D007633 ORTHO05D008817 1.3e-15 87.8 146 36.3
FAN07G1430 Fragaria x ananassa HOM05D007633 ORTHO05D008817 2.9e-15 86.7 184 34.8
SalBow3G0862 Salvia bowleyana HOM05D007633 ORTHO05D008817 8.5e-15 85.1 228 28.5
Lsat_1_v5_gn_8_155361 Lactuca sativa HOM05D007633 ORTHO05D008817 7.2e-14 82.0 144 30.6
VMungo1215G1192 Vigna mungo HOM05D007633 ORTHO05D008817 2.1e-13 80.5 239 25.9
PGSC0003DMG400016306 Solanum tuberosum HOM05D007633 ORTHO05D008817 1.4e-12 77.8 103 35.0
BcaC05g24387 Brassica carinata HOM05D012198 ORTHO05D008817 3.0e-12 76.6 233 27.9
Carub.0001s0476 Capsella rubella HOM05D012198 ORTHO05D008817 3.3e-11 73.2 242 27.7
SEGI_17234 Sequoiadendron giganteum HOM05D007633 ORTHO05D008817 2.4e-09 67.0 72 41.7
TWI73G0180 Tripterygium wilfordii HOM05D007633 ORTHO05D008817 1.7e-07 60.8 104 36.5
arahy.Tifrunner.gnm1.ann1.5LNY8Z Arachis hypogaea HOM05D007633 ORTHO05D008817 8.5e-07 58.5 154 27.3


User provided reference genes

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