Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund12078 Selenicereus undatus HOM05D006626 ORTHO05D007352 3.2e-62 241.5 115 100.0
Sc20g0004680 Simmondsia chinensis HOM05D006626 ORTHO05D007352 2.7e-45 185.3 99 86.9
Ah.08g212230 Amaranthus hybridus HOM05D006626 ORTHO05D007352 1.1e-43 179.9 99 83.8
Sabra06G0064100 Salix brachista HOM05D006626 ORTHO05D007352 3.3e-43 178.3 89 91.0
Aqoxy4G02911 Aquilegia oxysepala HOM05D006626 ORTHO05D007352 4.3e-43 177.9 95 87.4
SGA_v2.0_scaffold126G33791 Striga asiatica HOM05D006626 ORTHO05D007352 7.3e-43 177.2 95 84.2
Lj2A96T66 Lonicera japonica HOM05D006626 ORTHO05D007352 1.3e-42 176.4 94 87.2
TAR623G1666 Trochodendron aralioides HOM05D006626 ORTHO05D007352 2.8e-42 175.3 95 85.3
Nn2g10382 Nelumbo nucifera HOM05D006626 ORTHO05D007352 8.1e-42 173.7 95 83.2
AUR62040984 Chenopodium quinoa HOM05D006626 ORTHO05D007352 1.1e-41 173.3 88 89.8
vmacro20144 Vaccinium macrocarpon HOM05D006626 ORTHO05D007352 1.1e-41 173.3 94 85.1
ECA236G0397 Erigeron canadensis HOM05D006626 ORTHO05D007352 1.4e-41 172.9 88 89.8
Migut.J00335 Erythranthe guttata HOM05D006626 ORTHO05D007352 1.4e-41 172.9 94 84.0
Actinidia26461 Actinidia chinensis HOM05D006626 ORTHO05D007352 2.4e-41 172.2 94 84.0
PSO339G0986 Papaver somniferum HOM05D006626 ORTHO05D007352 3.1e-41 171.8 95 83.2
Atru.chr8.1962 Acer truncatum HOM05D006626 ORTHO05D007352 4.0e-41 171.4 88 88.6
PGR004G1893 Punica granatum HOM05D006626 ORTHO05D007352 4.0e-41 171.4 94 85.1
Duzib093G0902 Durio zibethinus HOM05D006626 ORTHO05D007352 5.3e-41 171.0 92 85.9
CSS0017232 Camellia sinensis var. sinensis HOM05D006626 ORTHO05D007352 6.9e-41 170.6 94 81.9
Thecc.05G040800 Theobroma cacao HOM05D006626 ORTHO05D007352 6.9e-41 170.6 92 85.9
MSTRG.19088 Avicennia marina HOM05D006626 ORTHO05D007352 9.0e-41 170.2 94 80.9
Cc06_g02710 Coffea canephora HOM05D006626 ORTHO05D007352 9.0e-41 170.2 94 84.0
Gohir.D09G152000 Gossypium hirsutum HOM05D006626 ORTHO05D007352 9.0e-41 170.2 92 84.8
Gorai.006G173400 Gossypium raimondii HOM05D006626 ORTHO05D007352 9.0e-41 170.2 92 84.8
QL07p048128 Quercus lobata HOM05D006626 ORTHO05D007352 9.0e-41 170.2 92 84.8
Sed0005156 Sechium edule HOM05D006626 ORTHO05D007352 9.0e-41 170.2 88 88.6
Ciclev10012389m.g Citrus clementina HOM05D006626 ORTHO05D007352 1.2e-40 169.9 88 87.5
MELO3C009261.2 Cucumis melo HOM05D006626 ORTHO05D007352 1.2e-40 169.9 88 87.5
CsaV3_3G034930 Cucumis sativus L. HOM05D006626 ORTHO05D007352 1.2e-40 169.9 88 87.5
CANSAT35G0626 Cannabis sativa HOM05D006626 ORTHO05D007352 1.5e-40 169.5 88 87.5
COL.COLO4_14816 Corchorus olitorius HOM05D006626 ORTHO05D007352 1.5e-40 169.5 92 84.8
Gohir.A09G156700 Gossypium hirsutum HOM05D006626 ORTHO05D007352 1.5e-40 169.5 92 84.8
HanXRQChr04g0124851 Helianthus annuus HOM05D006626 ORTHO05D007352 1.5e-40 169.5 88 88.6
Solyc09g010710.4 Solanum lycopersicum HOM05D006626 ORTHO05D007352 2.6e-40 168.7 88 87.5
Sopen09g005420 Solanum pennellii HOM05D006626 ORTHO05D007352 2.6e-40 168.7 88 87.5
PGSC0003DMG400008843 Solanum tuberosum HOM05D006626 ORTHO05D007352 2.6e-40 168.7 88 87.5
ATR0559G191 Amborella trichopoda HOM05D006626 ORTHO05D007352 3.4e-40 168.3 94 83.0
Lj1g0010963 Lotus japonicus HOM05D006626 ORTHO05D007352 3.4e-40 168.3 92 84.8
TWI74G0730 Tripterygium wilfordii HOM05D006626 ORTHO05D007352 5.8e-40 167.5 92 82.6
GSVIVG01034185001 Vitis vinifera HOM05D006626 ORTHO05D007352 5.8e-40 167.5 93 82.8
Aa31LG3G1920 Aethionema arabicum HOM05D006626 ORTHO05D007352 7.6e-40 167.2 92 82.6
CAN.G326.19 Capsicum annuum HOM05D006626 ORTHO05D007352 7.6e-40 167.2 88 86.4
FvH4_6g13970 Fragaria vesca HOM05D006626 ORTHO05D007352 7.6e-40 167.2 95 82.1
FAN05G2294 Fragaria x ananassa HOM05D006626 ORTHO05D007352 7.6e-40 167.2 95 82.1
FAN09G4835 Fragaria x ananassa HOM05D006626 ORTHO05D007352 7.6e-40 167.2 95 82.1
FAN14G0594 Fragaria x ananassa HOM05D006626 ORTHO05D007352 7.6e-40 167.2 95 82.1
Glyma.08G358600 Glycine max HOM05D006626 ORTHO05D007352 7.6e-40 167.2 88 85.2
MBI14_g37824_MAGBIO Magnolia biondii HOM05D006626 ORTHO05D007352 7.6e-40 167.2 95 81.1
Manes.09G089800 Manihot esculenta HOM05D006626 ORTHO05D007352 7.6e-40 167.2 88 87.5
Peaxi162Scf00710g00212 Petunia axillaris HOM05D006626 ORTHO05D007352 7.6e-40 167.2 94 81.9
Ca_11335_v3 Cicer arietinum L. HOM05D006626 ORTHO05D007352 9.9e-40 166.8 88 87.5
RcHm_v2.0_Chr3g0466791 Rosa chinensis HOM05D006626 ORTHO05D007352 1.3e-39 166.4 92 84.8
MD12G1140400 Malus domestica HOM05D006626 ORTHO05D007352 1.7e-39 166.0 92 83.7
FAN02G1739 Fragaria x ananassa HOM05D006626 ORTHO05D007352 2.2e-39 165.6 95 81.1
Medtr7g060340 Medicago truncatula HOM05D006626 ORTHO05D007352 3.8e-39 164.9 92 81.5
PSO384G0023 Papaver somniferum HOM05D006626 ORTHO05D007352 3.8e-39 164.9 95 80.0
Aa31sc277G10 Aethionema arabicum HOM05D006626 ORTHO05D007352 4.9e-39 164.5 92 80.4
Phvul.008G100000 Phaseolus vulgaris HOM05D006626 ORTHO05D007352 4.9e-39 164.5 88 84.1
AT3G09430 Arabidopsis thaliana HOM05D006626 ORTHO05D007352 6.4e-39 164.1 92 80.4
MD04G1127200 Malus domestica HOM05D006626 ORTHO05D007352 6.4e-39 164.1 92 83.7
arahy.Tifrunner.gnm1.ann1.BMK4YH Arachis hypogaea HOM05D006626 ORTHO05D007352 8.4e-39 163.7 88 85.2
A05p39550 Brassica napus HOM05D006626 ORTHO05D007352 8.4e-39 163.7 88 83.0
C05p58580 Brassica napus HOM05D006626 ORTHO05D007352 8.4e-39 163.7 88 83.0
BolC5t34508H Brassica oleracea HOM05D006626 ORTHO05D007352 8.4e-39 163.7 88 83.0
Carub.0003s0853 Capsella rubella HOM05D006626 ORTHO05D007352 8.4e-39 163.7 88 83.0
Thhalv10021243m.g Eutrema salsugineum HOM05D006626 ORTHO05D007352 8.4e-39 163.7 88 83.0
Nitab4.5_0005449g0010 Nicotiana tabacum HOM05D006626 ORTHO05D007352 1.4e-38 162.9 94 78.7
AL3G20610 Arabidopsis lyrata HOM05D006626 ORTHO05D007352 1.9e-38 162.5 88 83.0
arahy.Tifrunner.gnm1.ann1.DD5A1S Arachis hypogaea HOM05D006626 ORTHO05D007352 3.2e-38 161.8 88 84.1
BcaC05g29673 Brassica carinata HOM05D006626 ORTHO05D007352 3.2e-38 161.8 88 81.8
Nitab4.5_0003552g0020 Nicotiana tabacum HOM05D006626 ORTHO05D007352 3.2e-38 161.8 94 78.7
CARHR083840 Cardamine hirsuta HOM05D006626 ORTHO05D007352 4.2e-38 161.4 88 81.8
Lalb_Chr19g0125411 Lupinus albus HOM05D006626 ORTHO05D007352 4.2e-38 161.4 87 82.8
CiPaw.09G191700 Carya illinoinensis HOM05D006626 ORTHO05D007352 5.5e-38 161.0 92 83.7
Sp3g07800 Schrenkiella parvula HOM05D006626 ORTHO05D007352 7.1e-38 160.6 88 80.7
DCAR_014846 Daucus carota HOM05D006626 ORTHO05D007352 9.3e-38 160.2 88 83.0
HPP92_012592 Vanilla planifolia HOM05D006626 ORTHO05D007352 1.2e-37 159.8 88 81.8
EL10Ac7g17297 Beta vulgaris HOM05D006626 ORTHO05D007352 2.1e-37 159.1 80 90.0
THA.LOC104816277 Tarenaya hassleriana HOM05D006626 ORTHO05D007352 2.1e-37 159.1 96 76.0
Zm00001eb105220 Zea mays HOM05D006626 ORTHO05D007352 7.9e-37 157.1 85 84.7
Potri.006G084500 Populus trichocarpa HOM05D006626 ORTHO05D007352 1.3e-36 156.4 79 89.9
AUR62042106 Chenopodium quinoa HOM05D006626 ORTHO05D007352 5.1e-36 154.5 79 89.9
Oeu049236.1 Olea europaea HOM05D006626 ORTHO05D007352 1.1e-35 153.3 81 86.4
Rhsim05G0191600 Rhododendron simsii HOM05D006626 ORTHO05D007352 1.5e-35 152.9 79 88.6
CDE09G1242 Ceratophyllum demersum HOM05D006626 ORTHO05D007352 1.9e-35 152.5 82 86.6
Nitab4.5_0005575g0040 Nicotiana tabacum HOM05D006626 ORTHO05D007352 5.6e-35 151.0 79 86.1
BraA05t22736Z Brassica rapa HOM05D006626 ORTHO05D007352 1.3e-34 149.8 84 78.6
Eucgr.K03142 Eucalyptus grandis HOM05D006626 ORTHO05D007352 1.6e-34 149.4 79 83.5
Os07g0695700 Oryza sativa ssp. japonica HOM05D006626 ORTHO05D007352 3.7e-34 148.3 79 84.8
VMungo1383G0921 Vigna mungo HOM05D006626 ORTHO05D007352 4.8e-34 147.9 79 82.3
Mapoly0001s0170 Marchantia polymorpha HOM05D006626 ORTHO05D007352 8.1e-34 147.1 88 77.3
FAN09G0676 Fragaria x ananassa HOM05D004773 ORTHO05D005943 1.1e-33 146.7 77 87.0
SHI12668 Sapria himalayana HOM05D006626 ORTHO05D007352 4.0e-33 144.8 79 79.7
Peaxi162Scf00165g01519 Petunia axillaris HOM05D006626 ORTHO05D007352 5.3e-33 144.4 99 71.7
QL01p055053 Quercus lobata HOM05D006626 ORTHO05D007352 6.9e-33 144.1 79 83.5
Nitab4.5_0000761g0070 Nicotiana tabacum HOM05D006626 ORTHO05D007352 2.2e-31 139.0 79 82.3
ClCG10G021100 Citrullus lanatus HOM05D006626 ORTHO05D007352 3.8e-31 138.3 72 88.9
AagrBONN_evm.TU.Sc2ySwM_362.1793 Anthoceros agrestis HOM05D006626 ORTHO05D007352 1.1e-30 136.7 86 74.4
Lsat_1_v5_gn_8_82780 Lactuca sativa HOM05D006626 ORTHO05D007352 2.5e-30 135.6 72 84.7
CBR_g84850 Chara braunii HOM05D006626 ORTHO05D007352 1.9e-27 125.9 89 65.2
SEGI_14743 Sequoiadendron giganteum HOM05D006626 ORTHO05D007352 2.5e-27 125.6 79 75.9
Atru.chr11.672 Acer truncatum HOM05D006626 ORTHO05D007352 3.7e-26 121.7 79 73.4
QL93p0107_0195 Quercus lobata HOM05D006626 ORTHO05D007352 1.2e-13 80.1 40 87.5
QL01p053860 Quercus lobata HOM05D006626 ORTHO05D007352 1.0e-12 77.0 48 70.8
SGA_v2.0_scaffold18G08259 Striga asiatica HOM05D006626 ORTHO05D007352 1.0e-12 77.0 40 82.5
Prupe.6G253700 Prunus persica HOM05D006626 ORTHO05D007352 4.8e-10 68.2 40 75.0
TAR633G2221 Trochodendron aralioides HOM05D006626 ORTHO05D007352 4.8e-10 68.2 42 71.4


User provided reference genes

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