Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund12070 Selenicereus undatus HOM05D004973 ORTHO05D006119 5.2e-115 417.9 244 100.0
Manes.08G000800 Manihot esculenta HOM05D004973 ORTHO05D006119 3.4e-21 106.3 256 35.2
Sc01g0003720 Simmondsia chinensis HOM05D004973 ORTHO05D006119 7.5e-21 105.1 274 36.1
DCAR_017742 Daucus carota HOM05D004973 ORTHO05D006119 1.3e-20 104.4 266 37.6
Peaxi162Scf00472g00079 Petunia axillaris HOM05D004973 ORTHO05D006119 5.4e-19 99.0 254 37.0
Manes.09G071500 Manihot esculenta HOM05D004973 ORTHO05D006119 2.1e-18 97.1 243 37.4
CSS0037973 Camellia sinensis var. sinensis HOM05D004973 ORTHO05D006119 2.7e-18 96.7 272 34.9
Ciclev10012401m.g Citrus clementina HOM05D004973 ORTHO05D006119 7.8e-18 95.1 258 35.7
Hma1.2p1_0111F.1_g053560 Hydrangea macrophylla HOM05D004973 ORTHO05D006119 1.0e-17 94.7 268 35.4
Haze_20682 Corylus avellana HOM05D004973 ORTHO05D006119 1.7e-17 94.0 274 36.5
Nitab4.5_0000202g0430 Nicotiana tabacum HOM05D004973 ORTHO05D006119 2.3e-17 93.6 289 30.8
Dinv37236 Davidia involucrata HOM05D004973 ORTHO05D006119 6.6e-17 92.0 269 34.6
GSVIVG01025573001 Vitis vinifera HOM05D004973 ORTHO05D009107 8.6e-17 91.7 246 34.6
COL.COLO4_10304 Corchorus olitorius HOM05D004973 ORTHO05D006119 1.9e-16 90.5 247 36.4
EL10Ac7g17266 Beta vulgaris HOM05D004973 ORTHO05D006119 4.3e-16 89.4 255 33.3
QL07p045858 Quercus lobata HOM05D004973 ORTHO05D006119 4.3e-16 89.4 273 34.4
Sabra06G0166700 Salix brachista HOM05D004973 ORTHO05D006119 4.3e-16 89.4 275 33.5
PGSC0003DMG400011051 Solanum tuberosum HOM05D004973 ORTHO05D006119 4.3e-16 89.4 250 37.6
Sopen10g033860 Solanum pennellii HOM05D004973 ORTHO05D006119 5.6e-16 89.0 252 37.3
Thecc.05G050500 Theobroma cacao HOM05D004973 ORTHO05D006119 5.6e-16 89.0 260 33.5
CSS0008181 Camellia sinensis var. sinensis HOM05D004973 ORTHO05D006119 1.2e-15 87.8 251 35.9
HanXRQChr14g0453421 Helianthus annuus HOM05D004973 ORTHO05D006119 1.2e-15 87.8 238 35.3
HanXRQChr07g0195961 Helianthus annuus HOM05D004973 ORTHO05D006119 2.1e-15 87.0 273 31.9
CiPaw.09G185000 Carya illinoinensis HOM05D004973 ORTHO05D006119 2.8e-15 86.7 255 34.9
Solyc10g084420.2 Solanum lycopersicum HOM05D004973 ORTHO05D006119 2.8e-15 86.7 242 38.0
Potri.006G216300 Populus trichocarpa HOM05D004973 ORTHO05D006119 3.6e-15 86.3 268 33.2
FAN14G1622 Fragaria x ananassa HOM05D004973 ORTHO05D006119 4.7e-15 85.9 271 31.7
Nitab4.5_0016310g0010 Nicotiana tabacum HOM05D004973 ORTHO05D006119 4.7e-15 85.9 287 30.7
Cc06_g03330 Coffea canephora HOM05D004973 ORTHO05D006119 6.2e-15 85.5 304 31.2
Gorai.006G177300 Gossypium raimondii HOM05D004973 ORTHO05D006119 6.2e-15 85.5 262 35.1
Nitab4.5_0000643g0210 Nicotiana tabacum HOM05D004973 ORTHO05D006119 1.4e-14 84.3 262 32.8
CDE04G2944 Ceratophyllum demersum HOM05D005673 ORTHO05D007081 3.1e-14 83.2 103 53.4
CSS0000366 Camellia sinensis var. sinensis HOM05D004973 ORTHO05D006119 4.0e-14 82.8 251 34.3
Gohir.A09G160200 Gossypium hirsutum HOM05D004973 ORTHO05D006119 4.0e-14 82.8 259 35.1
ECA238G2925 Erigeron canadensis HOM05D004973 ORTHO05D006119 5.2e-14 82.4 259 35.1
Atru.chr8.2512 Acer truncatum HOM05D004973 ORTHO05D006119 6.8e-14 82.0 85 61.2
Dinv35683 Davidia involucrata HOM05D004973 ORTHO05D006119 6.8e-14 82.0 271 32.1
FAN09G0990 Fragaria x ananassa HOM05D004973 ORTHO05D006119 6.8e-14 82.0 261 30.7
CANSAT80G1895 Cannabis sativa HOM05D004973 ORTHO05D006119 1.5e-13 80.9 251 34.7
Potri.016G082700 Populus trichocarpa HOM05D004973 ORTHO05D006119 2.6e-13 80.1 104 54.8
Medtr1g067220 Medicago truncatula HOM05D004973 ORTHO05D006119 4.4e-13 79.3 255 32.9
Lj2A104T80 Lonicera japonica HOM05D004973 ORTHO05D006119 5.8e-13 79.0 157 45.2
FAN05G3543 Fragaria x ananassa HOM05D004973 ORTHO05D006119 9.9e-13 78.2 271 31.0
Gohir.D04G116800 Gossypium hirsutum HOM05D004973 ORTHO05D006119 1.3e-12 77.8 248 33.1
FvH4_6g14910 Fragaria vesca HOM05D004973 ORTHO05D006119 1.7e-12 77.4 99 49.5
Eucgr.A01206 Eucalyptus grandis HOM05D004973 ORTHO05D006119 2.2e-12 77.0 248 30.2
Lj3A975T70 Lonicera japonica HOM05D004973 ORTHO05D006119 2.9e-12 76.6 270 32.6
Nn2g12943 Nelumbo nucifera HOM05D004973 ORTHO05D006119 3.7e-12 76.3 259 30.9
Peaxi162Scf00597g00824 Petunia axillaris HOM05D004973 ORTHO05D006119 3.7e-12 76.3 244 32.0
Prupe.6G245100 Prunus persica HOM05D004973 ORTHO05D009107 3.7e-12 76.3 273 31.5
Gohir.A04G077600 Gossypium hirsutum HOM05D004973 ORTHO05D006119 4.9e-12 75.9 245 33.1
FAN02G2240 Fragaria x ananassa HOM05D004973 ORTHO05D006119 6.4e-12 75.5 99 48.5
DCAR_014954 Daucus carota HOM05D000267 ORTHO05D000298 8.3e-12 75.1 283 30.7
Ah.15g091990 Amaranthus hybridus HOM05D004973 ORTHO05D006119 1.1e-11 74.7 254 33.9
Migut.J00395 Erythranthe guttata HOM05D004973 ORTHO05D006119 1.1e-11 74.7 247 33.2
Gorai.009G421700 Gossypium raimondii HOM05D004973 ORTHO05D006119 1.4e-11 74.3 248 32.3
TWI53G0396 Tripterygium wilfordii HOM05D004973 ORTHO05D006119 1.4e-11 74.3 119 47.1
Gohir.D09G155800 Gossypium hirsutum HOM05D004973 ORTHO05D006119 1.9e-11 73.9 107 49.5
MD12G1129800 Malus domestica HOM05D004973 ORTHO05D006119 2.4e-11 73.6 266 30.8
BraA03t11302Z Brassica rapa HOM05D000861 ORTHO05D001799 3.2e-11 73.2 69 59.4
Migut.L01647 Erythranthe guttata HOM05D004973 ORTHO05D006119 4.1e-11 72.8 276 29.0
Thhalv10017275m.g Eutrema salsugineum HOM05D004973 ORTHO05D006119 4.1e-11 72.8 100 52.0
TAR623G0749 Trochodendron aralioides HOM05D004973 ORTHO05D006119 5.4e-11 72.4 175 37.1
MELO3C003079.2 Cucumis melo HOM05D004973 ORTHO05D006119 7.1e-11 72.0 242 32.6
PSO384G3176 Papaver somniferum HOM05D004973 ORTHO05D006119 7.1e-11 72.0 71 57.7
C03p24200 Brassica napus HOM05D000861 ORTHO05D001799 9.2e-11 71.6 67 59.7
BolC3t14814H Brassica oleracea HOM05D004973 ORTHO05D006119 9.2e-11 71.6 67 59.7
Nn2g10587 Nelumbo nucifera HOM05D004973 ORTHO05D006119 9.2e-11 71.6 99 47.5
Sp4g19620 Schrenkiella parvula HOM05D004973 ORTHO05D006119 1.2e-10 71.2 97 51.5
SGA_v2.0_scaffold35G14182 Striga asiatica HOM05D004973 ORTHO05D006119 1.2e-10 71.2 71 56.3
THA.LOC104823441 Tarenaya hassleriana HOM05D004973 ORTHO05D006119 1.6e-10 70.9 102 51.0
AL4G33680 Arabidopsis lyrata HOM05D004973 ORTHO05D006119 2.7e-10 70.1 116 45.7
arahy.Tifrunner.gnm1.ann1.C8BSPY Arachis hypogaea HOM05D004973 ORTHO05D006119 2.7e-10 70.1 259 30.5
Oeu060067.1 Olea europaea HOM05D004973 ORTHO05D006119 3.5e-10 69.7 298 34.2
CiPaw.10G138900 Carya illinoinensis HOM05D004973 ORTHO05D006119 4.6e-10 69.3 316 29.7
CsaV3_4G024460 Cucumis sativus L. HOM05D004973 ORTHO05D006119 4.6e-10 69.3 256 31.2
BraA04t18326Z Brassica rapa HOM05D004973 ORTHO05D006119 6.0e-10 68.9 156 37.2
Aqoxy4G03126 Aquilegia oxysepala HOM05D004973 ORTHO05D006119 7.8e-10 68.6 107 46.7
BcaNung06611 Brassica carinata HOM05D004973 ORTHO05D006119 1.0e-09 68.2 166 36.7
BcaNung06612 Brassica carinata HOM05D004973 ORTHO05D006119 1.0e-09 68.2 87 50.6
C04p65800 Brassica napus HOM05D004973 ORTHO05D006119 1.0e-09 68.2 166 36.7
BolC4t28082H Brassica oleracea HOM05D004973 ORTHO05D006119 1.0e-09 68.2 166 36.7
PGR004G2597 Punica granatum HOM05D004973 ORTHO05D006119 1.0e-09 68.2 96 45.8
SalBow4G1465 Salvia bowleyana HOM05D004973 ORTHO05D006119 1.0e-09 68.2 107 48.6
MSTRG.26739 Avicennia marina HOM05D004973 ORTHO05D006119 1.3e-09 67.8 73 54.8
A04p28480 Brassica napus HOM05D004973 ORTHO05D006119 1.3e-09 67.8 108 46.3
A03p20600 Brassica napus HOM05D000861 ORTHO05D001799 1.7e-09 67.4 174 34.5
C04p10700 Brassica napus HOM05D004973 ORTHO05D006119 1.7e-09 67.4 73 56.2
Lsat_1_v5_gn_2_110141 Lactuca sativa HOM05D004973 ORTHO05D006119 1.7e-09 67.4 273 28.6
arahy.Tifrunner.gnm1.ann1.P2DQEA Arachis hypogaea HOM05D004973 ORTHO05D006119 2.3e-09 67.0 255 29.8
RcHm_v2.0_Chr3g0468111 Rosa chinensis HOM05D004973 ORTHO05D006119 2.3e-09 67.0 173 35.8
BcaC02g07519 Brassica carinata HOM05D004973 ORTHO05D006119 3.0e-09 66.6 73 54.8
A05p08610 Brassica napus HOM05D004973 ORTHO05D006119 3.9e-09 66.2 64 59.4
Eucgr.K03187 Eucalyptus grandis HOM05D004973 ORTHO05D006119 3.9e-09 66.2 240 30.4
THA.LOC104805339 Tarenaya hassleriana HOM05D004973 ORTHO05D006119 5.1e-09 65.9 96 49.0
MSTRG.10290 Avicennia marina HOM05D004973 ORTHO05D006119 6.6e-09 65.5 325 29.5
Lj5g0023317 Lotus japonicus HOM05D004973 ORTHO05D006119 8.6e-09 65.1 264 33.3
Zm00001eb012960 Zea mays HOM05D004973 ORTHO05D006119 8.6e-09 65.1 65 60.0
MSTRG.19121 Avicennia marina HOM05D004973 ORTHO05D006119 1.1e-08 64.7 100 45.0
Carub.0004s1921 Capsella rubella HOM05D004973 ORTHO05D006119 1.5e-08 64.3 102 47.1
AT2G37300 Arabidopsis thaliana HOM05D004973 ORTHO05D006119 2.5e-08 63.5 153 37.3
Cpa.g.sc114.29 Carica papaya HOM05D004973 ORTHO05D006119 2.5e-08 63.5 235 29.4
ClCG04G008700 Citrullus lanatus HOM05D004973 ORTHO05D006119 2.5e-08 63.5 240 30.4
PGR004G0295 Punica granatum HOM05D004973 ORTHO05D006119 2.5e-08 63.5 259 34.7
TPR.G35656 Trifolium pratense HOM05D004973 ORTHO05D006119 2.5e-08 63.5 109 47.7
MD04G1111000 Malus domestica HOM05D004973 ORTHO05D006119 4.3e-08 62.8 95 45.3
MBI05_g16176_MAGBIO Magnolia biondii HOM05D004973 ORTHO05D006119 5.6e-08 62.4 62 58.1
Glyma.03G176000 Glycine max HOM05D004973 ORTHO05D006119 7.3e-08 62.0 116 43.1
Glyma.10G047400 Glycine max HOM05D004973 ORTHO05D006119 7.3e-08 62.0 270 27.4
Glyma.19G176500 Glycine max HOM05D004973 ORTHO05D006119 7.3e-08 62.0 105 43.8
VMungo1383G2298 Vigna mungo HOM05D004973 ORTHO05D006119 1.6e-07 60.8 158 31.0
Psat6g069760 Pisum sativum HOM05D004973 ORTHO05D006119 2.1e-07 60.5 70 55.7
CAN.G867.6 Capsicum annuum HOM05D004973 ORTHO05D006119 2.8e-07 60.1 259 29.7
Os03g0283400 Oryza sativa ssp. japonica HOM05D004973 ORTHO05D006119 2.8e-07 60.1 163 39.3
Oeu029113.1 Olea europaea HOM05D004973 ORTHO05D006119 3.6e-07 59.7 248 28.2
MELO3C009296.2 Cucumis melo HOM05D004973 ORTHO05D006119 6.2e-07 58.9 91 40.7
HPP92_001696 Vanilla planifolia HOM05D004973 ORTHO05D006119 1.1e-06 58.2 85 44.7
unitig_60.g25816 Utricularia gibba HOM05D004973 ORTHO05D006119 1.8e-06 57.4 181 34.3
vmacro20083 Vaccinium macrocarpon HOM05D004973 ORTHO05D006119 1.8e-06 57.4 232 32.3
VMungo0720G0246 Vigna mungo HOM05D004973 ORTHO05D006119 2.4e-06 57.0 285 28.1
Sed0023997 Sechium edule HOM05D004973 ORTHO05D006119 4.0e-06 56.2 70 50.0
Lalb_Chr06g0171201 Lupinus albus HOM05D004973 ORTHO05D006119 8.9e-06 55.1 98 42.9


User provided reference genes

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