Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund12011 Selenicereus undatus HOM05D006283 ORTHO05D007727 4.6e-140 501.1 240 100.0
Hma1.2p1_0847F.1_g227833 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 3.0e-91 339.0 193 78.2
MSTRG.9766 Avicennia marina HOM05D006283 ORTHO05D007727 1.7e-89 333.2 194 78.4
Dinv22729 Davidia involucrata HOM05D006283 ORTHO05D007727 1.7e-89 333.2 194 76.8
TAR362G0864 Trochodendron aralioides HOM05D006283 ORTHO05D007727 2.9e-89 332.4 194 76.3
GSVIVG01010753001 Vitis vinifera HOM05D006283 ORTHO05D007727 4.9e-89 331.6 195 79.0
Atru.chr3.1494 Acer truncatum HOM05D006283 ORTHO05D007727 1.8e-88 329.7 194 75.3
Peaxi162Scf00126g00015 Petunia axillaris HOM05D006283 ORTHO05D007727 3.2e-88 328.9 197 75.1
Gohir.D10G129700 Gossypium hirsutum HOM05D006283 ORTHO05D007727 4.1e-88 328.6 194 76.3
Gorai.011G143000 Gossypium raimondii HOM05D006283 ORTHO05D007727 4.1e-88 328.6 194 76.3
Actinidia35975 Actinidia chinensis HOM05D006283 ORTHO05D007727 5.4e-88 328.2 194 75.3
Eucgr.H00372 Eucalyptus grandis HOM05D006283 ORTHO05D007727 9.2e-88 327.4 194 74.7
Migut.N02075 Erythranthe guttata HOM05D006283 ORTHO05D007727 1.6e-87 326.6 194 75.3
Manes.11G120300 Manihot esculenta HOM05D006283 ORTHO05D007727 1.6e-87 326.6 194 75.3
CiPaw.02G054900 Carya illinoinensis HOM05D006283 ORTHO05D007727 4.6e-87 325.1 204 74.0
Cc03_g13090 Coffea canephora HOM05D006283 ORTHO05D007727 5.9e-87 324.7 194 74.7
Gohir.A10G137000 Gossypium hirsutum HOM05D006283 ORTHO05D007727 5.9e-87 324.7 194 75.3
Nn1g09881 Nelumbo nucifera HOM05D006283 ORTHO05D007727 5.9e-87 324.7 194 75.3
Aqoxy2G04092 Aquilegia oxysepala HOM05D006283 ORTHO05D007727 1.3e-86 323.6 200 72.0
CANSAT78G1066 Cannabis sativa HOM05D006283 ORTHO05D007727 1.3e-86 323.6 194 74.2
Sc13g0006800 Simmondsia chinensis HOM05D006283 ORTHO05D007727 1.3e-86 323.6 219 68.5
Rhsim09G0027900 Rhododendron simsii HOM05D006283 ORTHO05D007727 3.0e-86 322.4 212 70.3
Ciclev10021635m.g Citrus clementina HOM05D006283 ORTHO05D007727 6.6e-86 321.2 194 74.2
Sopen06g019520 Solanum pennellii HOM05D006283 ORTHO05D007727 6.6e-86 321.2 203 70.9
Ca_20784_v3 Cicer arietinum L. HOM05D006283 ORTHO05D007727 8.6e-86 320.9 200 71.5
Solyc06g054450.3 Solanum lycopersicum HOM05D006283 ORTHO05D007727 1.5e-85 320.1 203 70.9
TPR.G34200 Trifolium pratense HOM05D006283 ORTHO05D007727 1.5e-85 320.1 200 71.5
PGSC0003DMG400030791 Solanum tuberosum HOM05D006283 ORTHO05D007727 4.3e-85 318.5 203 70.9
Potri.019G051300 Populus trichocarpa HOM05D006283 ORTHO05D007727 1.2e-84 317.0 204 71.6
Actinidia34602 Actinidia chinensis HOM05D006283 ORTHO05D007727 1.6e-84 316.6 194 72.7
PSO017G4585 Papaver somniferum HOM05D006283 ORTHO05D007727 2.1e-84 316.2 194 72.7
PSO675G6362 Papaver somniferum HOM05D006283 ORTHO05D007727 2.1e-84 316.2 194 72.7
Thecc.04G180000 Theobroma cacao HOM05D006283 ORTHO05D007727 2.1e-84 316.2 194 73.2
PGR142G0689 Punica granatum HOM05D006283 ORTHO05D007727 2.8e-84 315.8 194 72.7
SalBow3G2028 Salvia bowleyana HOM05D006283 ORTHO05D007727 1.0e-83 313.9 194 71.1
MD04G1040100 Malus domestica HOM05D006283 ORTHO05D007727 1.8e-83 313.2 193 71.5
CAN.G1247.5 Capsicum annuum HOM05D006283 ORTHO05D007727 3.1e-83 312.4 195 72.8
Glyma.11G127900 Glycine max HOM05D006283 ORTHO05D007727 3.1e-83 312.4 194 71.1
Prupe.1G192800 Prunus persica HOM05D006283 ORTHO05D007727 4.0e-83 312.0 194 71.1
Medtr4g067140 Medicago truncatula HOM05D006283 ORTHO05D007727 6.8e-83 311.2 198 69.2
DCAR_029916 Daucus carota HOM05D006283 ORTHO05D007727 2.0e-82 309.7 201 66.7
Lj3g0020373 Lotus japonicus HOM05D006283 ORTHO05D007727 2.0e-82 309.7 194 70.1
Lalb_Chr01g0003171 Lupinus albus HOM05D006283 ORTHO05D007727 2.0e-82 309.7 201 68.7
FvH4_4g10770 Fragaria vesca HOM05D006283 ORTHO05D007727 2.6e-82 309.3 195 72.8
RcHm_v2.0_Chr4g0406391 Rosa chinensis HOM05D006283 ORTHO05D007727 2.6e-82 309.3 194 72.2
AT3G59390 Arabidopsis thaliana HOM05D006283 ORTHO05D007727 4.4e-82 308.5 194 71.1
AL5G41290 Arabidopsis lyrata HOM05D006283 ORTHO05D007727 5.8e-82 308.1 194 71.6
CARHR169780 Cardamine hirsuta HOM05D006283 ORTHO05D007727 7.5e-82 307.8 204 69.1
Lalb_Chr03g0026141 Lupinus albus HOM05D006283 ORTHO05D007727 1.7e-81 306.6 201 67.7
CsaV3_4G003450 Cucumis sativus L. HOM05D006283 ORTHO05D007727 2.2e-81 306.2 194 69.6
MELO3C017715.2 Cucumis melo HOM05D006283 ORTHO05D007727 2.9e-81 305.8 194 69.1
VMungo1127G0333 Vigna mungo HOM05D006283 ORTHO05D007727 3.7e-81 305.4 193 69.9
TWI15G0224 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 4.9e-81 305.1 194 68.6
TWI15G1054 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 4.9e-81 305.1 194 68.6
Phvul.011G054600 Phaseolus vulgaris HOM05D006283 ORTHO05D007727 6.4e-81 304.7 203 66.0
ECA234G3618 Erigeron canadensis HOM05D006283 ORTHO05D007727 1.1e-80 303.9 205 67.3
Thhalv10006168m.g Eutrema salsugineum HOM05D006283 ORTHO05D007727 1.1e-80 303.9 194 70.1
Lsat_1_v5_gn_4_30241 Lactuca sativa HOM05D006283 ORTHO05D007727 1.1e-80 303.9 205 67.3
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 3.2e-80 302.4 163 87.7
Sed0010312 Sechium edule HOM05D006283 ORTHO05D007727 5.4e-80 301.6 194 66.0
Sp5g03750 Schrenkiella parvula HOM05D006283 ORTHO05D007727 7.0e-80 301.2 194 70.1
THA.LOC104803704 Tarenaya hassleriana HOM05D006283 ORTHO05D007727 7.0e-80 301.2 194 69.6
Nitab4.5_0000130g0340 Nicotiana tabacum HOM05D006283 ORTHO05D007727 9.2e-80 300.8 182 75.8
HanXRQChr16g0525531 Helianthus annuus HOM05D006283 ORTHO05D007727 1.2e-79 300.4 205 65.9
BraA07t30108Z Brassica rapa HOM05D006283 ORTHO05D007727 1.6e-79 300.1 203 66.0
BolC6t37776H Brassica oleracea HOM05D006283 ORTHO05D007727 2.0e-79 299.7 203 66.0
C06p26110 Brassica napus HOM05D006283 ORTHO05D007727 2.7e-79 299.3 203 66.0
Carub.0005s2613 Capsella rubella HOM05D006283 ORTHO05D007727 4.6e-79 298.5 194 67.5
Aa31LG10G13740 Aethionema arabicum HOM05D006283 ORTHO05D007727 6.0e-79 298.1 194 68.6
A07p24630 Brassica napus HOM05D006283 ORTHO05D007727 1.0e-78 297.4 203 65.0
EL10Ac3g05930 Beta vulgaris HOM05D006283 ORTHO05D007727 2.3e-78 296.2 246 60.2
Sed0022341 Sechium edule HOM05D006283 ORTHO05D007727 1.1e-77 293.9 194 66.5
Zm00001eb406800 Zea mays HOM05D006283 ORTHO05D007727 6.2e-76 288.1 194 66.5
unitig_747.g21679 Utricularia gibba HOM05D006283 ORTHO05D007727 8.1e-76 287.7 201 63.7
Duzib268G1109 Durio zibethinus HOM05D006283 ORTHO05D007727 1.4e-75 287.0 175 73.7
Oeu034461.3 Olea europaea HOM05D006283 ORTHO05D007727 8.3e-73 277.7 192 68.2
Duzib151G0050 Durio zibethinus HOM05D006283 ORTHO05D007727 2.1e-71 273.1 163 76.1
COL.COLO4_07661 Corchorus olitorius HOM05D006283 ORTHO05D007727 4.6e-71 271.9 163 74.8
Haze_01514 Corylus avellana HOM05D006283 ORTHO05D007727 2.3e-70 269.6 173 72.8
FAN12G2405 Fragaria x ananassa HOM05D006283 ORTHO05D007727 3.0e-70 269.2 203 64.0
arahy.Tifrunner.gnm1.ann1.7GR0QN Arachis hypogaea HOM05D006283 ORTHO05D007727 2.9e-65 252.7 173 67.6
arahy.Tifrunner.gnm1.ann1.9EYB94 Arachis hypogaea HOM05D006283 ORTHO05D007727 3.2e-64 249.2 172 67.4
BcaC08g44981 Brassica carinata HOM05D006283 ORTHO05D007727 6.0e-63 245.0 198 58.1
BcaB02g07471 Brassica carinata HOM05D006283 ORTHO05D007727 7.8e-63 244.6 198 58.1
CDE08G0087 Ceratophyllum demersum HOM05D006283 ORTHO05D007727 1.7e-62 243.4 163 68.1
SGA_v2.0_scaffold12G06158 Striga asiatica HOM05D006283 ORTHO05D007727 1.1e-61 240.7 196 61.2
AUR62002299 Chenopodium quinoa HOM05D006283 ORTHO05D007727 9.6e-61 237.7 132 84.8
Mapoly0093s0081 Marchantia polymorpha HOM05D006283 ORTHO05D007727 1.2e-60 237.3 200 49.5
Pp3c25_2030 Physcomitrium patens HOM05D006283 ORTHO05D007727 8.1e-60 234.6 198 54.0
SMO119G0098 Selaginella moellendorffii HOM05D006283 ORTHO05D007727 5.2e-59 231.9 196 51.0
HPP92_009172 Vanilla planifolia HOM05D006283 ORTHO05D007727 1.5e-58 230.3 163 63.2
Sabra19G0057300 Salix brachista HOM05D006283 ORTHO05D007727 1.3e-54 217.2 176 59.7
ATR0824G015 Amborella trichopoda HOM05D006283 ORTHO05D007727 1.3e-52 210.7 144 66.7
Hma1.2p1_0639F.1_g194055 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 8.1e-52 208.0 131 74.8
Hma1.2p1_0847F.1_g227840 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 8.1e-52 208.0 131 74.8
FAN07G2518 Fragaria x ananassa HOM05D006283 ORTHO05D007727 4.9e-49 198.7 137 70.1
SEGI_31631 Sequoiadendron giganteum HOM05D006283 ORTHO05D007727 7.9e-47 191.4 141 62.4
Glyma.12G052600 Glycine max HOM05D006283 ORTHO05D007727 6.9e-43 178.3 117 69.2
QL10p048749 Quercus lobata HOM05D006283 ORTHO05D007727 9.0e-43 177.9 111 70.3
vmacro00624 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 2.4e-40 169.9 150 54.7
Lj3A196G22 Lonicera japonica HOM05D006283 ORTHO05D007727 1.9e-37 160.2 93 77.4
QL10p048744 Quercus lobata HOM05D006283 ORTHO05D007727 1.6e-36 157.1 84 82.1
Cre16.g673841 Chlamydomonas reinhardtii HOM05D006283 ORTHO05D007727 3.4e-26 122.9 195 32.3
Peaxi162Scf00126g00003 Petunia axillaris HOM05D006283 ORTHO05D007727 8.5e-25 118.2 111 52.3
Lj3A196T13 Lonicera japonica HOM05D006283 ORTHO05D007727 3.2e-24 116.3 95 56.8
RcHm_v2.0_Chr4g0406821 Rosa chinensis HOM05D006283 ORTHO05D007727 1.3e-22 110.9 62 75.8
FAN12G0556 Fragaria x ananassa HOM05D006283 ORTHO05D007727 8.7e-22 108.2 74 66.2
ClCG07G015660 Citrullus lanatus HOM05D006283 ORTHO05D007727 1.1e-19 101.3 60 71.7
RcHm_v2.0_Chr4g0406831 Rosa chinensis HOM05D006283 ORTHO05D007727 1.1e-19 101.3 78 61.5
Psat7g091240 Pisum sativum HOM05D006283 ORTHO05D007727 1.4e-19 100.9 70 61.4
HanXRQChr16g0525261 Helianthus annuus HOM05D006283 ORTHO05D007727 1.3e-17 94.4 68 61.8
vmacro00625 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 2.9e-17 93.2 59 72.9
Hma1.2p1_0639F.1_g194050 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 5.0e-17 92.4 44 88.6
Hma1.2p1_0847F.1_g227839 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 5.0e-17 92.4 44 88.6
Ah.07g201980 Amaranthus hybridus HOM05D006283 ORTHO05D007727 1.0e-09 68.2 42 69.0
Cfa015166 Carpinus fangiana HOM05D006283 ORTHO05D007727 1.0e-09 68.2 43 74.4
CSS0010514 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 6.5e-09 65.5 38 78.9
CSS0034877 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 6.5e-09 65.5 38 78.9
CSS0022675 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 1.2e-07 61.2 31 87.1
CSS0026672 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 1.2e-07 61.2 31 87.1


User provided reference genes

Program Settings