Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund11971 Selenicereus undatus HOM05D006777 ORTHO05D008360 1.2e-86 323.2 166 100.0
Sc25g0003260 Simmondsia chinensis HOM05D006777 ORTHO05D008360 1.2e-83 313.2 166 95.2
Actinidia23410 Actinidia chinensis HOM05D006777 ORTHO05D008360 1.6e-83 312.8 166 94.6
AUR62016205 Chenopodium quinoa HOM05D006777 ORTHO05D008360 2.1e-83 312.4 165 95.2
CsaV3_2G011130 Cucumis sativus L. HOM05D006777 ORTHO05D008360 2.8e-83 312.0 166 94.0
MELO3C019533.2 Cucumis melo HOM05D006777 ORTHO05D008360 3.6e-83 311.6 166 94.0
Sed0015167 Sechium edule HOM05D006777 ORTHO05D008360 3.6e-83 311.6 166 94.0
Psat7g074160 Pisum sativum HOM05D006777 ORTHO05D008360 6.1e-83 310.8 166 94.0
Duzib268G0333 Durio zibethinus HOM05D006777 ORTHO05D008360 1.0e-82 310.1 166 93.4
Thecc.04G200300 Theobroma cacao HOM05D006777 ORTHO05D008360 1.0e-82 310.1 166 93.4
MSTRG.4231 Avicennia marina HOM05D006777 ORTHO05D008360 1.8e-82 309.3 165 93.9
CANSAT78G1417 Cannabis sativa HOM05D006777 ORTHO05D008360 2.3e-82 308.9 166 92.8
Lj4g0000567 Lotus japonicus HOM05D006777 ORTHO05D008360 2.3e-82 308.9 166 92.8
Manes.03G146100 Manihot esculenta HOM05D006777 ORTHO05D008360 2.3e-82 308.9 166 94.0
Solyc12g098430.2 Solanum lycopersicum HOM05D006777 ORTHO05D008360 3.1e-82 308.5 166 93.4
Glyma.05G153800 Glycine max HOM05D006777 ORTHO05D008360 4.0e-82 308.1 166 92.8
Glyma.08G111500 Glycine max HOM05D006777 ORTHO05D008360 4.0e-82 308.1 166 92.8
Sopen12g033210 Solanum pennellii HOM05D006777 ORTHO05D008360 4.0e-82 308.1 166 92.8
CSS0000801 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 5.2e-82 307.8 166 92.8
Migut.G00716 Erythranthe guttata HOM05D006777 ORTHO05D008360 5.2e-82 307.8 166 92.2
Medtr8g085290 Medicago truncatula HOM05D006777 ORTHO05D008360 6.8e-82 307.4 166 92.2
Dinv38213 Davidia involucrata HOM05D006777 ORTHO05D008360 8.9e-82 307.0 166 92.2
Prupe.1G158800 Prunus persica HOM05D006777 ORTHO05D008360 8.9e-82 307.0 166 91.6
SalBow8G2353 Salvia bowleyana HOM05D006777 ORTHO05D008360 8.9e-82 307.0 166 92.2
SalBow8G2632 Salvia bowleyana HOM05D006777 ORTHO05D008360 8.9e-82 307.0 166 92.2
THA.LOC104804809 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 8.9e-82 307.0 166 92.2
MD04G1012700 Malus domestica HOM05D006777 ORTHO05D008360 1.2e-81 306.6 166 91.6
RcHm_v2.0_Chr4g0414361 Rosa chinensis HOM05D006777 ORTHO05D008360 1.2e-81 306.6 166 91.6
RcHm_v2.0_Chr7g0213901 Rosa chinensis HOM05D006777 ORTHO05D008360 1.2e-81 306.6 166 91.6
THA.LOC104808706 Tarenaya hassleriana HOM05D006777 ORTHO05D008360 1.2e-81 306.6 166 92.2
BcaC02g09355 Brassica carinata HOM05D006777 ORTHO05D008360 1.5e-81 306.2 166 91.6
TWI53G1099 Tripterygium wilfordii HOM05D006777 ORTHO05D008360 1.5e-81 306.2 166 91.6
TAR362G0671 Trochodendron aralioides HOM05D006777 ORTHO05D008360 1.5e-81 306.2 166 91.0
Aa31LG9G3900 Aethionema arabicum HOM05D006777 ORTHO05D008360 2.6e-81 305.4 166 91.6
AL7G42240 Arabidopsis lyrata HOM05D006777 ORTHO05D008360 5.8e-81 304.3 166 91.0
AT4G14147 Arabidopsis thaliana HOM05D006777 ORTHO05D008360 5.8e-81 304.3 166 91.0
Carub.0007s2827 Capsella rubella HOM05D006777 ORTHO05D008360 5.8e-81 304.3 166 91.0
HanXRQChr01g0022451 Helianthus annuus HOM05D006777 ORTHO05D008360 5.8e-81 304.3 166 92.2
Potri.017G057400 Populus trichocarpa HOM05D006777 ORTHO05D008360 5.8e-81 304.3 166 92.2
GSVIVG01020914001 Vitis vinifera HOM05D006777 ORTHO05D008360 5.8e-81 304.3 165 92.1
Ciclev10006063m.g Citrus clementina HOM05D006777 ORTHO05D008360 7.5e-81 303.9 166 91.6
FvH4_4g13710 Fragaria vesca HOM05D006777 ORTHO05D008360 7.5e-81 303.9 166 91.6
Gohir.A02G020900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 7.5e-81 303.9 164 92.1
Gohir.D02G024900 Gossypium hirsutum HOM05D006777 ORTHO05D008360 7.5e-81 303.9 164 92.1
Gorai.005G030800 Gossypium raimondii HOM05D006777 ORTHO05D008360 7.5e-81 303.9 164 92.1
BcaB02g08630 Brassica carinata HOM05D006777 ORTHO05D008360 9.8e-81 303.5 166 90.4
CDE06G2004 Ceratophyllum demersum HOM05D006777 ORTHO05D008360 1.3e-80 303.1 165 91.5
PGR083G1334 Punica granatum HOM05D006777 ORTHO05D008360 1.3e-80 303.1 166 91.0
CiPaw.02G065600 Carya illinoinensis HOM05D006777 ORTHO05D008360 1.7e-80 302.8 166 91.6
TPR.G11902 Trifolium pratense HOM05D006777 ORTHO05D008360 1.7e-80 302.8 166 91.0
Atru.chr4.1633 Acer truncatum HOM05D006777 ORTHO05D008360 2.2e-80 302.4 166 90.4
ATR1147G041 Amborella trichopoda HOM05D006777 ORTHO05D008360 2.2e-80 302.4 166 90.4
Os03g0848300 Oryza sativa ssp. japonica HOM05D006777 ORTHO05D008360 2.2e-80 302.4 166 90.4
Sp7g12000 Schrenkiella parvula HOM05D006777 ORTHO05D008360 2.2e-80 302.4 166 90.4
Thhalv10026384m.g Eutrema salsugineum HOM05D006777 ORTHO05D008360 3.7e-80 301.6 166 90.4
PSO063G4325 Papaver somniferum HOM05D006777 ORTHO05D008360 3.7e-80 301.6 165 91.5
PSO017G6923 Papaver somniferum HOM05D006777 ORTHO05D008360 4.9e-80 301.2 165 90.9
Aqoxy5G00004 Aquilegia oxysepala HOM05D006777 ORTHO05D008360 1.1e-79 300.1 165 90.3
Nitab4.5_0000676g0120 Nicotiana tabacum HOM05D006777 ORTHO05D008360 1.1e-79 300.1 170 90.0
DCAR_026626 Daucus carota HOM05D006777 ORTHO05D008360 4.1e-79 298.1 166 89.2
FAN22G2344 Fragaria x ananassa HOM05D006777 ORTHO05D008360 7.0e-79 297.4 172 88.4
HPP92_006972 Vanilla planifolia HOM05D006777 ORTHO05D008360 1.2e-78 296.6 166 88.6
C04p41680 Brassica napus HOM05D006777 ORTHO05D008360 1.6e-78 296.2 166 90.4
Lalb_Chr12g0205521 Lupinus albus HOM05D006777 ORTHO05D008360 2.7e-78 295.4 164 89.0
arahy.Tifrunner.gnm1.ann1.QE6BNJ Arachis hypogaea HOM05D006777 ORTHO05D008360 1.0e-77 293.5 179 84.4
A04p08010 Brassica napus HOM05D006777 ORTHO05D008360 1.3e-77 293.1 166 89.2
Mapoly0060s0011 Marchantia polymorpha HOM05D006777 ORTHO05D008360 1.7e-77 292.7 166 88.0
arahy.Tifrunner.gnm1.ann1.GXV5N1 Arachis hypogaea HOM05D006777 ORTHO05D008360 3.9e-77 291.6 179 83.8
Zm00001eb210820 Zea mays HOM05D006777 ORTHO05D008360 6.6e-77 290.8 185 81.1
FAN12G2838 Fragaria x ananassa HOM05D006777 ORTHO05D008360 4.3e-76 288.1 166 88.6
FAN07G2803 Fragaria x ananassa HOM05D006777 ORTHO05D008360 5.6e-76 287.7 186 81.7
Pp3c3_19880 Physcomitrium patens HOM05D006777 ORTHO05D008360 9.5e-76 287.0 164 87.8
Lsat_1_v5_gn_1_72060 Lactuca sativa HOM05D006777 ORTHO05D008360 2.8e-75 285.4 153 92.8
SMO146G0157 Selaginella moellendorffii HOM05D006777 ORTHO05D008360 2.8e-75 285.4 164 87.2
MELO3C020359.2 Cucumis melo HOM05D006777 ORTHO05D008360 6.2e-75 284.3 151 94.0
Eucgr.H02768 Eucalyptus grandis HOM05D006777 ORTHO05D008360 1.1e-74 283.5 153 92.2
ClCG06G008050 Citrullus lanatus HOM05D006777 ORTHO05D008360 2.3e-74 282.3 158 90.5
unitig_37.g12031 Utricularia gibba HOM05D006777 ORTHO05D008360 2.6e-73 278.9 151 92.1
Lalb_Chr07g0186741 Lupinus albus HOM05D006777 ORTHO05D008360 2.9e-72 275.4 147 92.5
FAN17G1701 Fragaria x ananassa HOM05D006777 ORTHO05D008360 3.7e-72 275.0 172 84.3
CsaV3_3G018320 Cucumis sativus L. HOM05D006777 ORTHO05D008360 1.1e-71 273.5 147 93.2
Duzib212G0541 Durio zibethinus HOM05D006777 ORTHO05D008360 1.1e-71 273.5 147 93.2
Sabra17G0050600 Salix brachista HOM05D006777 ORTHO05D008360 7.0e-71 270.8 147 93.2
AagrBONN_evm.TU.Sc2ySwM_228.5073 Anthoceros agrestis HOM05D006777 ORTHO05D008360 4.6e-70 268.1 160 83.8
CBR_g4477 Chara braunii HOM05D006777 ORTHO05D008360 5.6e-68 261.2 166 77.1
Actinidia35856 Actinidia chinensis HOM05D006777 ORTHO05D008360 2.1e-67 259.2 136 93.4
BolC4t25746H Brassica oleracea HOM05D006777 ORTHO05D008360 1.1e-66 256.9 136 92.6
Hma1.2p1_0187F.1_g082390 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 1.1e-66 256.9 136 92.6
BraA04t16489Z Brassica rapa HOM05D006777 ORTHO05D008360 8.9e-66 253.8 136 91.2
Nn1g07943 Nelumbo nucifera HOM05D006777 ORTHO05D008360 9.9e-65 250.4 136 89.7
Peaxi162Scf00652g00116 Petunia axillaris HOM05D006777 ORTHO05D008360 9.9e-65 250.4 165 79.4
SGA_v2.0_scaffold14G07057 Striga asiatica HOM05D006777 ORTHO05D008360 9.9e-65 250.4 258 57.4
Nitab4.5_0000850g0170 Nicotiana tabacum HOM05D006777 ORTHO05D008360 2.9e-64 248.8 164 79.3
COL.COLO4_20174 Corchorus olitorius HOM05D001598 ORTHO05D002757 1.0e-61 240.4 128 93.0
Dinv27219 Davidia involucrata HOM05D006777 ORTHO05D008360 1.9e-60 236.1 166 76.5
AUR62039283 Chenopodium quinoa HOM05D006777 ORTHO05D008360 2.5e-60 235.7 165 77.0
EL10Ac3g05505 Beta vulgaris HOM05D006777 ORTHO05D008360 3.3e-60 235.3 166 77.1
PGSC0003DMG402004570 Solanum tuberosum HOM05D006777 ORTHO05D008360 5.6e-60 234.6 130 91.5
Lj6A528G35 Lonicera japonica HOM05D006777 ORTHO05D008360 3.8e-56 221.9 125 90.4
SGA_v2.0_scaffold4G02170 Striga asiatica HOM05D006777 ORTHO05D008360 2.4e-55 219.2 229 57.6
CSS0009293 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 3.2e-55 218.8 120 92.5
CSS0028561 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 3.2e-55 218.8 120 92.5
SHI07424 Sapria himalayana HOM05D006777 ORTHO05D008360 9.3e-55 217.2 129 83.7
Haze_11625 Corylus avellana HOM05D006777 ORTHO05D008360 2.4e-50 202.6 185 64.9
Hma1.2p1_0187F.1_g082380 Hydrangea macrophylla HOM05D006777 ORTHO05D008360 5.3e-50 201.4 106 94.3
Haze_27630 Corylus avellana HOM05D006777 ORTHO05D008360 6.9e-50 201.1 165 60.6
CARHR220180 Cardamine hirsuta HOM05D006777 ORTHO05D008360 2.9e-48 195.7 106 91.5
QL06p026356 Quercus lobata HOM05D000003 ORTHO05D008360 3.1e-42 175.6 115 79.1
Cre06.g260800 Chlamydomonas reinhardtii HOM05D006777 ORTHO05D008360 2.0e-41 172.9 172 52.3
Hund03125 Selenicereus undatus HOM05D006777 ORTHO05D008360 5.4e-39 164.9 166 58.4
vmacro00459 Vaccinium macrocarpon HOM05D006777 ORTHO05D008360 1.3e-32 143.7 117 65.8
CAN.G767.6 Capsicum annuum HOM05D006777 ORTHO05D008360 1.4e-31 140.2 75 90.7
ECA248G0011 Erigeron canadensis HOM05D006777 ORTHO05D008360 2.5e-31 139.4 75 90.7
Sed0006533 Sechium edule HOM05D006777 ORTHO05D008360 3.2e-31 139.0 72 93.1
Lj3P402T13 Lonicera japonica HOM05D006777 ORTHO05D008360 2.6e-25 119.4 73 80.8
Cc00_g31310 Coffea canephora HOM05D006777 ORTHO05D008360 3.2e-23 112.5 78 76.9
Cpa.g.c27575.2 Carica papaya HOM05D006777 ORTHO05D008360 5.5e-23 111.7 57 93.0
Cc03_g11170 Coffea canephora HOM05D006777 ORTHO05D008360 5.9e-17 91.7 47 89.4
CSS0011736 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 2.2e-11 73.2 34 94.1
CSS0009674 Camellia sinensis var. sinensis HOM05D006777 ORTHO05D008360 5.9e-09 65.1 35 85.7
Lj3A409T19 Lonicera japonica HOM05D006777 ORTHO05D008360 2.5e-07 59.7 55 61.8


User provided reference genes

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