Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund11950 Selenicereus undatus HOM05D000947 ORTHO05D000079 7.3e-89 330.5 161 100.0
Hund03096 Selenicereus undatus HOM05D000947 ORTHO05D000079 9.1e-15 84.3 55 69.1
Duzib212G0811 Durio zibethinus HOM05D000947 ORTHO05D000079 2.3e-10 69.7 60 60.0
Prupe.1G126000 Prunus persica HOM05D000947 ORTHO05D000079 2.3e-10 69.7 55 65.5
GSVIVG01035048001 Vitis vinifera HOM05D000947 ORTHO05D000079 2.3e-10 69.7 56 60.7
Duzib151G1181 Durio zibethinus HOM05D000947 ORTHO05D000079 3.0e-10 69.3 60 56.7
Ah.04g154950 Amaranthus hybridus HOM05D000947 ORTHO05D000079 5.2e-10 68.6 55 63.6
Dinv02069 Davidia involucrata HOM05D000947 ORTHO05D000079 6.7e-10 68.2 55 60.0
Lj3A827T61 Lonicera japonica HOM05D000947 ORTHO05D000079 6.7e-10 68.2 55 58.2
MD13G1159000 Malus domestica HOM05D000947 ORTHO05D000079 8.8e-10 67.8 55 63.6
EL10Ac3g04929 Beta vulgaris HOM05D000947 ORTHO05D000079 1.1e-09 67.4 55 63.6
Duzib052G0902 Durio zibethinus HOM05D000947 ORTHO05D000079 1.1e-09 67.4 60 58.3
MELO3C006696.2 Cucumis melo HOM05D000947 ORTHO05D000079 2.0e-09 66.6 57 57.9
CsaV3_3G015000 Cucumis sativus L. HOM05D000947 ORTHO05D000079 2.0e-09 66.6 57 57.9
Thecc.04G294500 Theobroma cacao HOM05D000947 ORTHO05D000079 2.0e-09 66.6 60 58.3
CANSAT78G2367 Cannabis sativa HOM05D000947 ORTHO05D000079 2.6e-09 66.2 55 60.0
ClCG05G006370 Citrullus lanatus HOM05D000947 ORTHO05D000079 3.3e-09 65.9 57 57.9
Cfa015476 Carpinus fangiana HOM05D000947 ORTHO05D000079 4.4e-09 65.5 55 60.0
Haze_01093 Corylus avellana HOM05D000947 ORTHO05D000079 4.4e-09 65.5 55 60.0
Dinv44322 Davidia involucrata HOM05D000947 ORTHO05D000079 4.4e-09 65.5 55 58.2
MD16G1159200 Malus domestica HOM05D000947 ORTHO05D000079 4.4e-09 65.5 55 63.6
Sed0006924 Sechium edule HOM05D000947 ORTHO05D000079 5.7e-09 65.1 56 58.9
AUR62035068 Chenopodium quinoa HOM05D000947 ORTHO05D000079 9.7e-09 64.3 55 60.0
CSS0047505 Camellia sinensis var. sinensis HOM05D000947 ORTHO05D000079 1.7e-08 63.5 55 58.2
Cpa.g.sc9.102 Carica papaya HOM05D000947 ORTHO05D000079 2.2e-08 63.2 64 51.6
Sc25g0003460 Simmondsia chinensis HOM05D000947 ORTHO05D000079 2.2e-08 63.2 42 64.3
Potri.008G213900 Populus trichocarpa HOM05D000947 ORTHO05D000079 2.8e-08 62.8 55 58.2
TWI09G0287 Tripterygium wilfordii HOM05D000947 ORTHO05D000079 4.8e-08 62.0 56 57.1
TAR362G0689 Trochodendron aralioides HOM05D000947 ORTHO05D000079 4.8e-08 62.0 65 47.7
CAN.G1013.36 Capsicum annuum HOM05D000947 ORTHO05D000079 8.2e-08 61.2 57 52.6
TAR636G3276 Trochodendron aralioides HOM05D000947 ORTHO05D000079 8.2e-08 61.2 54 55.6
VMungo1215G1095 Vigna mungo HOM05D000947 ORTHO05D000079 8.2e-08 61.2 55 54.5
Ciclev10006161m.g Citrus clementina HOM05D000947 ORTHO05D000079 1.1e-07 60.8 56 51.8
Gohir.A02G052901 Gossypium hirsutum HOM05D000947 ORTHO05D000079 1.1e-07 60.8 58 58.6
Gohir.D02G057800 Gossypium hirsutum HOM05D000947 ORTHO05D000079 1.1e-07 60.8 58 58.6
Gorai.005G065300 Gossypium raimondii HOM05D000947 ORTHO05D000079 1.1e-07 60.8 58 58.6
Sabra08G0149800 Salix brachista HOM05D000947 ORTHO05D000079 1.1e-07 60.8 55 56.4
TWI73G0953 Tripterygium wilfordii HOM05D000947 ORTHO05D000079 1.4e-07 60.5 56 55.4
CiPaw.02G077400 Carya illinoinensis HOM05D000947 ORTHO05D000079 1.8e-07 60.1 56 60.7
Actinidia40348 Actinidia chinensis HOM05D000947 ORTHO05D000079 2.4e-07 59.7 55 54.5
COL.COLO4_34678 Corchorus olitorius HOM05D000947 ORTHO05D000079 2.4e-07 59.7 60 56.7
Lsat_1_v5_gn_6_115200 Lactuca sativa HOM05D000947 ORTHO05D000079 4.1e-07 58.9 59 54.2
Nn3g21608 Nelumbo nucifera HOM05D000947 ORTHO05D000079 4.1e-07 58.9 58 56.9
PGR004G0579 Punica granatum HOM05D000947 ORTHO05D000079 4.1e-07 58.9 34 82.4
MSTRG.10130 Avicennia marina HOM05D000947 ORTHO05D000079 5.3e-07 58.5 57 54.4
ECA233G3444 Erigeron canadensis HOM05D000947 ORTHO05D000079 5.3e-07 58.5 58 56.9
Gorai.002G029400 Gossypium raimondii HOM05D000947 ORTHO05D000079 5.3e-07 58.5 61 52.5
Nitab4.5_0000570g0300 Nicotiana tabacum HOM05D000947 ORTHO05D000079 5.3e-07 58.5 40 65.0
Nitab4.5_0003484g0090 Nicotiana tabacum HOM05D000947 ORTHO05D000079 5.3e-07 58.5 40 65.0
SalBow8G4529 Salvia bowleyana HOM05D000947 ORTHO05D000079 5.3e-07 58.5 57 54.4
Sopen12g034040 Solanum pennellii HOM05D000947 ORTHO05D000079 5.3e-07 58.5 57 56.1
PGSC0003DMG400004624 Solanum tuberosum HOM05D000947 ORTHO05D000079 5.3e-07 58.5 57 56.1
Manes.15G007100 Manihot esculenta HOM05D000947 ORTHO05D000079 7.0e-07 58.2 55 54.5
SalBow8G3102 Salvia bowleyana HOM05D000947 ORTHO05D000079 7.0e-07 58.2 56 55.4
Actinidia15578 Actinidia chinensis HOM05D000947 ORTHO05D000079 9.1e-07 57.8 56 53.6
Nitab4.5_0007972g0010 Nicotiana tabacum HOM05D000947 ORTHO05D000079 9.1e-07 57.8 39 69.2
Rhsim02G0006100 Rhododendron simsii HOM05D000947 ORTHO05D000079 9.1e-07 57.8 55 50.9
Rhsim04G0231900 Rhododendron simsii HOM05D000947 ORTHO05D000079 1.2e-06 57.4 55 50.9
Solyc12g099370.2 Solanum lycopersicum HOM05D000947 ORTHO05D000079 1.2e-06 57.4 57 54.4
Lj4g0003510 Lotus japonicus HOM05D000947 ORTHO05D000079 1.6e-06 57.0 56 55.4
Nitab4.5_0005180g0060 Nicotiana tabacum HOM05D000947 ORTHO05D000079 1.6e-06 57.0 60 53.3
SGA_v2.0_scaffold444G51713 Striga asiatica HOM05D000947 ORTHO05D000079 1.6e-06 57.0 57 54.4
CiPaw.01G142600 Carya illinoinensis HOM05D000947 ORTHO05D000079 2.0e-06 56.6 46 63.0
Lsat_1_v5_gn_6_19400 Lactuca sativa HOM05D000947 ORTHO05D000079 2.0e-06 56.6 59 54.2
Sed0004649 Sechium edule HOM05D000947 ORTHO05D000079 2.0e-06 56.6 35 80.0
THA.LOC104818898 Tarenaya hassleriana HOM05D000947 ORTHO05D000079 2.0e-06 56.6 66 45.5
CAN.G1013.35 Capsicum annuum HOM05D000947 ORTHO05D000079 2.6e-06 56.2 57 49.1
CAN.G484.54 Capsicum annuum HOM05D000947 ORTHO05D000079 2.6e-06 56.2 53 58.5
Cc03_g01210 Coffea canephora HOM05D000947 ORTHO05D000079 2.6e-06 56.2 37 70.3
Migut.G00106 Erythranthe guttata HOM05D000947 ORTHO05D000079 2.6e-06 56.2 57 52.6
Glyma.17G030900 Glycine max HOM05D000947 ORTHO05D000079 2.6e-06 56.2 59 54.2
Peaxi162Scf00017g00611 Petunia axillaris HOM05D000947 ORTHO05D000079 2.6e-06 56.2 41 65.9
Phvul.003G110400 Phaseolus vulgaris HOM05D000947 ORTHO05D000079 2.6e-06 56.2 55 50.9
vmacro08079 Vaccinium macrocarpon HOM05D000947 ORTHO05D000079 2.6e-06 56.2 56 53.6
Actinidia14268 Actinidia chinensis HOM05D000947 ORTHO05D000079 3.5e-06 55.8 55 50.9
Eucgr.H04023 Eucalyptus grandis HOM05D000947 ORTHO05D000079 3.5e-06 55.8 38 71.1
FAN07G1787 Fragaria x ananassa HOM05D000947 ORTHO05D000079 3.5e-06 55.8 60 55.0
Glyma.07G243000 Glycine max HOM05D000947 ORTHO05D000079 3.5e-06 55.8 59 54.2
Hma1.2p1_0013F.1_g008970 Hydrangea macrophylla HOM05D000947 ORTHO05D000079 3.5e-06 55.8 45 55.6
Hma1.2p1_0078F.1_g040180 Hydrangea macrophylla HOM05D000947 ORTHO05D000079 3.5e-06 55.8 55 52.7
Potri.010G001300 Populus trichocarpa HOM05D000947 ORTHO05D000079 3.5e-06 55.8 56 53.6
RcHm_v2.0_Chr4g0424251 Rosa chinensis HOM05D000947 ORTHO05D000079 3.5e-06 55.8 60 53.3
Sabra10G0001000 Salix brachista HOM05D000947 ORTHO05D000079 3.5e-06 55.8 56 55.4
THA.LOC104821790 Tarenaya hassleriana HOM05D000947 ORTHO05D000079 3.5e-06 55.8 62 46.8
HanXRQChr13g0394421 Helianthus annuus HOM05D000947 ORTHO05D000079 4.5e-06 55.5 59 54.2
Nn4g25675 Nelumbo nucifera HOM05D000947 ORTHO05D000079 4.5e-06 55.5 58 56.9
PGR031G2113 Punica granatum HOM05D000947 ORTHO05D000079 4.5e-06 55.5 34 73.5
Sp3g05710 Schrenkiella parvula HOM05D000947 ORTHO05D000079 4.5e-06 55.5 66 47.0
SGA_v2.0_scaffold18G08377 Striga asiatica HOM05D000947 ORTHO05D000079 4.5e-06 55.5 46 63.0
Sopen05g032880 Solanum pennellii HOM05D000947 ORTHO05D000079 5.9e-06 55.1 55 54.5
unitig_32.g11857 Utricularia gibba HOM05D000947 ORTHO05D000079 5.9e-06 55.1 29 75.9
Aa31LG11G7830 Aethionema arabicum HOM05D000947 ORTHO05D000079 7.7e-06 54.7 44 56.8
CARHR182300 Cardamine hirsuta HOM05D000947 ORTHO05D000079 7.7e-06 54.7 71 42.3
FvH4_4g19260 Fragaria vesca HOM05D000947 ORTHO05D000079 7.7e-06 54.7 60 53.3
FAN12G1806 Fragaria x ananassa HOM05D000947 ORTHO05D000079 7.7e-06 54.7 60 53.3
FAN12G3889 Fragaria x ananassa HOM05D000947 ORTHO05D000079 7.7e-06 54.7 60 53.3
Gohir.D01G023517 Gossypium hirsutum HOM05D000947 ORTHO05D000079 7.7e-06 54.7 66 48.5
Solyc05g054400.3 Solanum lycopersicum HOM05D000947 ORTHO05D000079 7.7e-06 54.7 56 53.6
PGSC0003DMG400023434 Solanum tuberosum HOM05D000947 ORTHO05D000079 7.7e-06 54.7 56 53.6
TWI53G1518 Tripterygium wilfordii HOM05D000947 ORTHO05D000079 7.7e-06 54.7 56 51.8


User provided reference genes

Program Settings