Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund11908 Selenicereus undatus HOM05D005408 ORTHO05D006790 5.9e-97 357.5 171 100.0
EL10Ac3g04981 Beta vulgaris HOM05D005408 ORTHO05D006790 4.3e-31 138.7 146 53.4
Solyc09g090340.3 Solanum lycopersicum HOM05D005408 ORTHO05D006790 1.3e-30 137.1 146 52.7
Sopen09g033240 Solanum pennellii HOM05D005408 ORTHO05D006790 1.3e-30 137.1 146 52.7
PGSC0003DMG400017212 Solanum tuberosum HOM05D005408 ORTHO05D006790 1.3e-30 137.1 145 51.7
Nitab4.5_0000044g0530 Nicotiana tabacum HOM05D005408 ORTHO05D006790 1.6e-30 136.7 146 52.1
Peaxi162Scf00392g00730 Petunia axillaris HOM05D005408 ORTHO05D006790 3.6e-30 135.6 146 52.1
CAN.G220.39 Capsicum annuum HOM05D005408 ORTHO05D006790 4.8e-30 135.2 145 51.0
AUR62002164 Chenopodium quinoa HOM05D005408 ORTHO05D006790 1.4e-29 133.7 146 52.1
AUR62015544 Chenopodium quinoa HOM05D005408 ORTHO05D006790 1.4e-29 133.7 146 52.1
Nitab4.5_0000596g0060 Nicotiana tabacum HOM05D005408 ORTHO05D006790 2.4e-29 132.9 146 50.7
DCAR_024278 Daucus carota HOM05D005408 ORTHO05D006790 3.4e-28 129.0 146 46.6
Hund03055 Selenicereus undatus HOM05D005408 ORTHO05D006790 3.4e-28 129.0 146 49.3
Sc19g0003230 Simmondsia chinensis HOM05D005408 ORTHO05D006790 3.4e-28 129.0 146 47.3
QL06p019224 Quercus lobata HOM05D005408 ORTHO05D006790 5.8e-28 128.3 146 50.0
SalBow3G0714 Salvia bowleyana HOM05D005408 ORTHO05D006790 2.2e-27 126.3 151 49.0
Hma1.2p1_0112F.1_g054305 Hydrangea macrophylla HOM05D005408 ORTHO05D006790 2.9e-27 125.9 169 44.4
Dinv27073 Davidia involucrata HOM05D005408 ORTHO05D006790 4.9e-27 125.2 169 45.6
CARHR220500 Cardamine hirsuta HOM05D005408 ORTHO05D006790 1.1e-26 124.0 170 43.5
Dinv29839 Davidia involucrata HOM05D005408 ORTHO05D006790 1.4e-26 123.6 169 43.8
CiPaw.02G109300 Carya illinoinensis HOM05D005408 ORTHO05D006790 2.4e-26 122.9 146 47.9
ClCG05G004200 Citrullus lanatus HOM05D005408 ORTHO05D006790 3.2e-26 122.5 166 44.6
Prupe.1G042300 Prunus persica HOM05D005408 ORTHO05D006790 3.2e-26 122.5 169 43.2
Cc03_g05790 Coffea canephora HOM05D005408 ORTHO05D006790 4.2e-26 122.1 146 47.9
TPR.G25189 Trifolium pratense HOM05D005408 ORTHO05D006790 4.2e-26 122.1 145 47.6
AL7G41950 Arabidopsis lyrata HOM05D005408 ORTHO05D006790 5.4e-26 121.7 172 41.3
Migut.N00286 Erythranthe guttata HOM05D005408 ORTHO05D006790 5.4e-26 121.7 146 44.5
Glyma.02G003800 Glycine max HOM05D005408 ORTHO05D006790 5.4e-26 121.7 144 49.3
Potri.008G169200 Populus trichocarpa HOM05D005408 ORTHO05D006790 5.4e-26 121.7 170 44.7
AT4G14310 Arabidopsis thaliana HOM05D005408 ORTHO05D006790 7.1e-26 121.3 172 41.9
Carub.0007s2798 Capsella rubella HOM05D005408 ORTHO05D006790 9.3e-26 120.9 172 41.3
Ciclev10004264m.g Citrus clementina HOM05D005408 ORTHO05D006790 9.3e-26 120.9 146 47.9
Potri.010G069200 Populus trichocarpa HOM05D005408 ORTHO05D006790 1.2e-25 120.6 169 45.0
THA.LOC104822240 Tarenaya hassleriana HOM05D005408 ORTHO05D006790 1.2e-25 120.6 146 45.9
CiPaw.01G181400 Carya illinoinensis HOM05D005408 ORTHO05D006790 1.6e-25 120.2 146 45.2
Haze_11418 Corylus avellana HOM05D005408 ORTHO05D006790 1.6e-25 120.2 146 45.9
Phvul.007G275400 Phaseolus vulgaris HOM05D005408 ORTHO05D006790 1.6e-25 120.2 141 47.5
Atru.chr4.2004 Acer truncatum HOM05D005408 ORTHO05D006790 2.1e-25 119.8 145 46.9
Gohir.A02G040500 Gossypium hirsutum HOM05D005408 ORTHO05D006790 2.1e-25 119.8 169 42.6
Manes.15G043300 Manihot esculenta HOM05D005408 ORTHO05D006790 3.5e-25 119.0 169 43.8
TAR633G1608 Trochodendron aralioides HOM05D005408 ORTHO05D006790 3.5e-25 119.0 146 47.9
Eucgr.H03018 Eucalyptus grandis HOM05D005408 ORTHO05D006790 4.6e-25 118.6 169 39.6
Oeu002940.1 Olea europaea HOM05D005408 ORTHO05D006790 4.6e-25 118.6 128 47.7
Sabra10G0037900 Salix brachista HOM05D005408 ORTHO05D006790 4.6e-25 118.6 169 44.4
Actinidia20821 Actinidia chinensis HOM05D005408 ORTHO05D006790 7.9e-25 117.9 128 50.8
Cfa014743 Carpinus fangiana HOM05D005408 ORTHO05D006790 7.9e-25 117.9 146 45.9
MD13G1216600 Malus domestica HOM05D005408 ORTHO05D006790 7.9e-25 117.9 146 46.6
Manes.15G043200 Manihot esculenta HOM05D005408 ORTHO05D006790 7.9e-25 117.9 146 47.3
Rhsim02G0041600 Rhododendron simsii HOM05D005408 ORTHO05D006790 7.9e-25 117.9 145 46.2
Aa31LG9G3050 Aethionema arabicum HOM05D005408 ORTHO05D006790 1.0e-24 117.5 175 41.7
MSTRG.21921 Avicennia marina HOM05D005408 ORTHO05D006790 1.0e-24 117.5 146 47.3
CSS0016984 Camellia sinensis var. sinensis HOM05D005408 ORTHO05D006790 1.0e-24 117.5 146 46.6
CSS0047984 Camellia sinensis var. sinensis HOM05D005408 ORTHO05D006790 1.0e-24 117.5 146 46.6
Duzib212G0761 Durio zibethinus HOM05D005408 ORTHO05D006790 1.0e-24 117.5 145 46.2
HanXRQChr11g0330791 Helianthus annuus HOM05D005408 ORTHO05D006790 1.0e-24 117.5 145 47.6
MD16G1222000 Malus domestica HOM05D005408 ORTHO05D006790 1.0e-24 117.5 146 46.6
FvH4_4g04020 Fragaria vesca HOM05D005408 ORTHO05D006790 1.3e-24 117.1 146 48.6
FAN12G0827 Fragaria x ananassa HOM05D005408 ORTHO05D006790 1.3e-24 117.1 146 48.6
TAR362G0279 Trochodendron aralioides HOM05D005408 ORTHO05D006790 1.3e-24 117.1 146 48.6
VMungo0720G1073 Vigna mungo HOM05D005408 ORTHO05D006790 1.3e-24 117.1 141 47.5
CsaV3_3G011930 Cucumis sativus L. HOM05D005408 ORTHO05D006790 1.8e-24 116.7 166 42.8
Gohir.D02G046500 Gossypium hirsutum HOM05D005408 ORTHO05D006790 1.8e-24 116.7 146 46.6
Gorai.005G051300 Gossypium raimondii HOM05D005408 ORTHO05D006790 1.8e-24 116.7 146 46.6
MELO3C006406.2 Cucumis melo HOM05D005408 ORTHO05D006790 2.3e-24 116.3 166 41.6
Duzib151G0888 Durio zibethinus HOM05D005408 ORTHO05D006790 2.3e-24 116.3 146 45.9
Thecc.04G259100 Theobroma cacao HOM05D005408 ORTHO05D006790 2.3e-24 116.3 169 42.0
BcaNung06103 Brassica carinata HOM05D005408 ORTHO05D006790 3.0e-24 115.9 165 43.6
Migut.G00502 Erythranthe guttata HOM05D005408 ORTHO05D006790 3.0e-24 115.9 145 47.6
TWI09G0385 Tripterygium wilfordii HOM05D005408 ORTHO05D006790 3.0e-24 115.9 146 45.2
GSVIVG01027854001 Vitis vinifera HOM05D005408 ORTHO05D006790 3.0e-24 115.9 146 47.3
Glyma.10G004700 Glycine max HOM05D005408 ORTHO05D006790 5.1e-24 115.2 144 47.2
COL.COLO4_15917 Corchorus olitorius HOM05D005408 ORTHO05D006790 6.7e-24 114.8 169 42.0
TWI53G1583 Tripterygium wilfordii HOM05D005408 ORTHO05D006790 6.7e-24 114.8 146 44.5
arahy.Tifrunner.gnm1.ann1.HQEG75 Arachis hypogaea HOM05D005408 ORTHO05D006790 8.7e-24 114.4 144 47.2
Sed0026902 Sechium edule HOM05D005408 ORTHO05D006790 1.1e-23 114.0 145 45.5
Ca_03010_v3 Cicer arietinum L. HOM05D005408 ORTHO05D006790 1.5e-23 113.6 146 45.2
RcHm_v2.0_Chr4g0394291 Rosa chinensis HOM05D005408 ORTHO05D006790 1.5e-23 113.6 169 43.2
Lj6g0021221 Lotus japonicus HOM05D005408 ORTHO05D006790 1.9e-23 113.2 163 42.9
THA.LOC104804761 Tarenaya hassleriana HOM05D005408 ORTHO05D006790 1.9e-23 113.2 139 44.6
ECA248G0134 Erigeron canadensis HOM05D005408 ORTHO05D006790 2.5e-23 112.8 171 41.5
Thhalv10024359m.g Eutrema salsugineum HOM05D005408 ORTHO05D006790 2.5e-23 112.8 170 42.9
Sp7g12340 Schrenkiella parvula HOM05D005408 ORTHO05D006790 2.5e-23 112.8 172 41.9
FAN17G2537 Fragaria x ananassa HOM05D005408 ORTHO05D006790 3.3e-23 112.5 146 47.9
Nn1g02867 Nelumbo nucifera HOM05D005408 ORTHO05D006790 3.3e-23 112.5 128 49.2
PGR004G2334 Punica granatum HOM05D005408 ORTHO05D006790 3.3e-23 112.5 147 44.2
arahy.Tifrunner.gnm1.ann1.NA4LRU Arachis hypogaea HOM05D005408 ORTHO05D006790 4.3e-23 112.1 144 46.5
CANSAT54G2691 Cannabis sativa HOM05D005408 ORTHO05D006790 5.6e-23 111.7 147 44.9
HanXRQChr01g0023201 Helianthus annuus HOM05D005408 ORTHO05D006790 5.6e-23 111.7 176 40.9
Sabra08G0129000 Salix brachista HOM05D005408 ORTHO05D006790 7.4e-23 111.3 185 40.5
Aqoxy5G00183 Aquilegia oxysepala HOM05D005408 ORTHO05D006790 1.3e-22 110.5 128 46.9
Psat6g104520 Pisum sativum HOM05D005408 ORTHO05D006790 1.6e-22 110.2 145 45.5
vmacro15459 Vaccinium macrocarpon HOM05D005408 ORTHO05D006790 1.6e-22 110.2 144 43.8
BcaC01g00205 Brassica carinata HOM05D005408 ORTHO05D006790 2.1e-22 109.8 167 41.3
C03p76860 Brassica napus HOM05D005408 ORTHO05D006790 2.1e-22 109.8 167 41.3
BolC3t19941H Brassica oleracea HOM05D005408 ORTHO05D006790 2.1e-22 109.8 167 41.3
Oeu005084.1 Olea europaea HOM05D005408 ORTHO05D006790 2.1e-22 109.8 127 44.1
A08p24350 Brassica napus HOM05D005408 ORTHO05D006790 2.8e-22 109.4 167 41.3
BraA08t34390Z Brassica rapa HOM05D005408 ORTHO05D006790 2.8e-22 109.4 167 41.3
Medtr1g041685 Medicago truncatula HOM05D005408 ORTHO05D006790 2.8e-22 109.4 146 44.5
SGA_v2.0_scaffold43G16217 Striga asiatica HOM05D005408 ORTHO05D006790 1.4e-21 107.1 147 44.9
MSTRG.4147 Avicennia marina HOM05D005408 ORTHO05D006790 5.3e-21 105.1 157 38.9
Lalb_Chr03g0037341 Lupinus albus HOM05D005408 ORTHO05D006790 5.3e-21 105.1 171 39.2
Cpa.g.sc44.32 Carica papaya HOM05D005408 ORTHO05D006790 1.2e-20 104.0 154 42.9
Lsat_1_v5_gn_1_74661 Lactuca sativa HOM05D005408 ORTHO05D006790 3.4e-20 102.4 128 46.1
Lj3A684T25 Lonicera japonica HOM05D005408 ORTHO05D006790 4.5e-20 102.1 142 43.0
MBI07_g31083_MAGBIO Magnolia biondii HOM05D005408 ORTHO05D006790 4.5e-20 102.1 128 46.1
PSO210G0343 Papaver somniferum HOM05D005408 ORTHO05D006790 4.5e-20 102.1 128 44.5
PSO832G1937 Papaver somniferum HOM05D005408 ORTHO05D006790 5.8e-20 101.7 126 44.4
CDE07G1006 Ceratophyllum demersum HOM05D005408 ORTHO05D006790 1.0e-19 100.9 136 42.6
Lj3A679T38 Lonicera japonica HOM05D005408 ORTHO05D006790 1.0e-19 100.9 142 42.3
TPR.G25191 Trifolium pratense HOM05D005408 ORTHO05D006790 1.0e-19 100.9 129 44.2
CDE04G2551 Ceratophyllum demersum HOM05D005408 ORTHO05D006790 1.3e-19 100.5 136 44.1
FAN22G0039 Fragaria x ananassa HOM05D005408 ORTHO05D006790 5.5e-18 95.1 170 37.1
Os02g0809900 Oryza sativa ssp. japonica HOM05D005408 ORTHO05D006790 5.5e-18 95.1 128 42.2
SGA_v2.0_scaffold101G29731 Striga asiatica HOM05D005408 ORTHO05D006790 7.1e-18 94.7 128 41.4
Zm00001eb258510 Zea mays HOM05D005408 ORTHO05D006790 1.2e-17 94.0 128 40.6
SEGI_14734 Sequoiadendron giganteum HOM05D005408 ORTHO05D006790 2.7e-17 92.8 153 37.9
Zm00001eb191660 Zea mays HOM05D005408 ORTHO05D006790 6.0e-17 91.7 128 40.6
unitig_736.g22443 Utricularia gibba HOM05D005408 ORTHO05D006790 3.9e-16 89.0 112 41.1
ATR0736G089 Amborella trichopoda HOM05D005408 ORTHO05D006790 8.7e-16 87.8 135 38.5
HPP92_008326 Vanilla planifolia HOM05D005408 ORTHO05D006790 1.5e-15 87.0 128 38.3
Mapoly0063s0094 Marchantia polymorpha HOM05D005408 ORTHO05D006790 1.3e-11 73.9 144 29.9
Pp3c16_10130 Physcomitrium patens HOM05D005408 ORTHO05D006790 1.3e-11 73.9 127 33.9
Pp3c25_7300 Physcomitrium patens HOM05D005408 ORTHO05D006790 2.5e-10 69.7 127 32.3
AagrBONN_evm.TU.Sc2ySwM_228.3605 Anthoceros agrestis HOM05D005408 ORTHO05D006790 1.8e-08 63.5 126 28.6
SalBow8G3468 Salvia bowleyana HOM05D005408 ORTHO05D006790 3.3e-07 59.3 61 49.2
SalBow7G4774 Salvia bowleyana HOM05D005408 ORTHO05D006790 8.2e-06 54.7 61 47.5


User provided reference genes

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