Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 7.4e-65 250.4 125 100.0
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 6.7e-50 200.7 126 78.6
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 6.7e-50 200.7 126 80.2
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 6.7e-50 200.7 124 75.0
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 1.3e-48 196.4 129 78.3
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 9.1e-47 190.3 127 75.6
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 5.9e-46 187.6 121 71.9
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 1.0e-45 186.8 117 74.4
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 3.8e-45 184.9 116 71.6
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 8.5e-45 183.7 116 72.4
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 1.5e-44 183.0 122 73.0
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 4.2e-44 181.4 117 74.4
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 7.2e-44 180.6 124 68.5
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 1.6e-43 179.5 122 69.7
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 2.1e-43 179.1 119 73.1
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 2.1e-43 179.1 115 72.2
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 3.6e-43 178.3 121 68.6
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 4.7e-43 177.9 116 73.3
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 4.7e-43 177.9 116 73.3
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 1.4e-42 176.4 119 70.6
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 1.4e-42 176.4 117 70.9
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 1.4e-42 176.4 118 67.8
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 1.4e-42 176.4 117 68.4
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 1.8e-42 176.0 116 69.8
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 1.8e-42 176.0 116 67.2
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 2.3e-42 175.6 118 71.2
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 2.3e-42 175.6 116 69.0
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 2.3e-42 175.6 116 69.0
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 3.0e-42 175.3 118 68.6
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 4.0e-42 174.9 118 68.6
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 5.2e-42 174.5 120 65.0
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 6.8e-42 174.1 119 69.7
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 1.5e-41 172.9 116 68.1
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 2.0e-41 172.6 119 69.7
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 5.7e-41 171.0 116 67.2
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 7.5e-41 170.6 116 66.4
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 9.8e-41 170.2 116 70.7
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 1.3e-40 169.9 116 69.0
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 1.3e-40 169.9 119 64.7
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 1.7e-40 169.5 128 62.5
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 1.7e-40 169.5 116 68.1
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 2.2e-40 169.1 116 68.1
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 2.2e-40 169.1 116 68.1
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 2.8e-40 168.7 121 63.6
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 3.7e-40 168.3 117 67.5
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 4.8e-40 167.9 124 66.1
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 4.8e-40 167.9 118 67.8
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 6.3e-40 167.5 117 65.0
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 8.3e-40 167.2 119 68.1
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 1.1e-39 166.8 118 66.9
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 1.8e-39 166.0 116 68.1
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 1.8e-39 166.0 117 69.2
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 2.4e-39 165.6 118 65.3
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 3.1e-39 165.2 116 65.5
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 4.1e-39 164.9 121 66.1
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 4.1e-39 164.9 120 65.8
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 9.1e-39 163.7 130 62.3
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 9.1e-39 163.7 120 65.8
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 1.2e-38 163.3 149 57.7
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 1.2e-38 163.3 120 66.7
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 1.2e-38 163.3 125 68.8
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 1.6e-38 162.9 118 65.3
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 1.6e-38 162.9 117 65.8
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 2.0e-38 162.5 135 60.7
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 2.0e-38 162.5 119 63.0
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 2.0e-38 162.5 119 65.5
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.0e-38 162.5 119 65.5
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 2.0e-38 162.5 116 65.5
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 3.5e-38 161.8 119 64.7
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 3.5e-38 161.8 116 65.5
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 4.5e-38 161.4 120 65.0
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.0e-37 160.2 120 63.3
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.0e-37 160.2 119 64.7
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 1.0e-37 160.2 120 65.8
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 2.9e-37 158.7 116 62.1
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 2.9e-37 158.7 121 66.9
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 6.5e-37 157.5 119 64.7
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 8.6e-37 157.1 125 65.6
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 3.3e-36 155.2 131 56.5
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 5.5e-36 154.5 117 65.0
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 1.2e-35 153.3 119 66.4
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 1.2e-35 153.3 118 65.3
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 1.6e-35 152.9 119 63.9
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 2.1e-35 152.5 132 55.3
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 2.8e-35 152.1 117 66.7
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 2.8e-35 152.1 117 66.7
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 1.0e-34 150.2 119 61.3
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 1.0e-34 150.2 117 65.8
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.0e-34 150.2 119 63.9
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 1.4e-34 149.8 119 63.9
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 1.4e-34 149.8 119 63.9
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 1.8e-34 149.4 119 63.0
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 3.0e-34 148.7 117 64.1
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 6.8e-34 147.5 117 63.2
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 8.9e-34 147.1 116 60.3
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 1.2e-33 146.7 119 58.8
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 3.4e-33 145.2 147 53.7
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 9.8e-33 143.7 116 60.3
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 2.8e-32 142.1 116 59.5
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 3.7e-32 141.7 119 61.3
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 1.8e-31 139.4 125 53.6
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 2.1e-27 125.9 85 67.1
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 2.1e-27 125.9 116 56.0
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 8.9e-26 120.6 118 55.1
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 1.2e-25 120.2 127 55.1
Actinidia34099 Actinidia chinensis HOM05D006981 ORTHO05D008719 8.3e-24 114.0 69 73.9
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 1.1e-23 113.6 118 51.7
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 7.8e-22 107.5 126 49.2
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 1.1e-18 97.1 68 72.1
Hma1.2p1_0270F.1_g108170 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 1.2e-17 93.6 55 70.9
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 1.4e-15 86.7 123 37.4
Psat1g030360 Pisum sativum HOM05D006981 ORTHO05D008719 9.2e-15 84.0 50 68.0
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 1.3e-13 80.1 75 56.0
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 2.5e-12 75.9 107 43.0
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 3.3e-12 75.5 116 39.7


User provided reference genes

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