Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund11686 Selenicereus undatus HOM05D001384 ORTHO05D001215 2.6e-15 84.7 61 100.0
EL10Ac3g05350 Beta vulgaris HOM05D001384 ORTHO05D001215 7.9e-12 73.2 60 70.0
Sc13g0009580 Simmondsia chinensis HOM05D001384 ORTHO05D001215 2.3e-11 71.6 60 85.0
BraA06t26418Z Brassica rapa HOM05D001384 ORTHO05D001215 2.6e-07 58.2 55 60.0
A06p34940 Brassica napus HOM05D001384 ORTHO05D001215 1.0e-06 56.2 55 58.2
C07p43610 Brassica napus HOM05D001384 ORTHO05D001215 1.0e-06 56.2 55 58.2
BolC7t44888H Brassica oleracea HOM05D001384 ORTHO05D001215 1.0e-06 56.2 55 58.2
TAR375G0324 Trochodendron aralioides HOM05D001384 ORTHO05D001215 1.0e-06 56.2 63 55.6
AL6G35460 Arabidopsis lyrata HOM05D001384 ORTHO05D001215 1.7e-06 55.5 54 70.4
AT5G24105 Arabidopsis thaliana HOM05D001384 ORTHO05D001215 1.7e-06 55.5 54 55.6
Carub.0006s2183 Capsella rubella HOM05D001384 ORTHO05D001215 2.2e-06 55.1 52 57.7
Thecc.01G347500 Theobroma cacao HOM05D001384 ORTHO05D001215 2.2e-06 55.1 60 53.3
BcaNung01209 Brassica carinata HOM05D001384 ORTHO05D001215 2.9e-06 54.7 55 56.4
CiPaw.05G258000 Carya illinoinensis HOM05D001384 ORTHO05D001215 2.9e-06 54.7 52 75.0
Carub.0004s2903 Capsella rubella HOM05D001384 ORTHO05D001215 3.8e-06 54.3 47 59.6
CiPaw.11G124600 Carya illinoinensis HOM05D001384 ORTHO05D001215 3.8e-06 54.3 27 100.0
Lalb_Chr04g0261751 Lupinus albus HOM05D001384 ORTHO05D001215 3.8e-06 54.3 59 72.9
THA.LOC104821373 Tarenaya hassleriana HOM05D001384 ORTHO05D001215 3.8e-06 54.3 49 57.1
A04p00990 Brassica napus HOM05D001384 ORTHO05D001215 5.0e-06 53.9 54 50.0
COL.COLO4_06332 Corchorus olitorius HOM05D001384 ORTHO05D001215 5.0e-06 53.9 63 50.8
Oeu030571.1 Olea europaea HOM05D001384 ORTHO05D001215 5.0e-06 53.9 48 62.5
ClCG07G014860 Citrullus lanatus HOM05D001384 ORTHO05D001215 6.5e-06 53.5 27 96.3
Gohir.A11G094700 Gossypium hirsutum HOM05D001384 ORTHO05D001215 6.5e-06 53.5 54 74.1
Manes.05G026100 Manihot esculenta HOM05D001384 ORTHO05D001215 6.5e-06 53.5 64 71.9
Os01g0657000 Oryza sativa ssp. japonica HOM05D001384 ORTHO05D001215 6.5e-06 53.5 56 51.8
Potri.003G136600 Populus trichocarpa HOM05D001384 ORTHO05D001215 6.5e-06 53.5 54 72.2
Potri.014G094800 Populus trichocarpa HOM05D001384 ORTHO05D001215 6.5e-06 53.5 59 69.5
Gohir.D11G099700 Gossypium hirsutum HOM05D001384 ORTHO05D001215 8.5e-06 53.1 54 57.4
Gorai.007G105900 Gossypium raimondii HOM05D001384 ORTHO05D001215 8.5e-06 53.1 54 57.4


User provided reference genes

Program Settings