Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund11657 Selenicereus undatus HOM05D000156 ORTHO05D005692 5.3e-81 304.3 154 100.0
EL10Ac3g05275 Beta vulgaris HOM05D000156 ORTHO05D005692 1.0e-23 114.0 150 51.3
AUR62006086 Chenopodium quinoa HOM05D000156 ORTHO05D005692 1.0e-23 114.0 146 50.0
Hund21008 Selenicereus undatus HOM05D000156 ORTHO05D005692 3.9e-23 112.1 163 46.0
AUR62019408 Chenopodium quinoa HOM05D000156 ORTHO05D005692 2.5e-22 109.4 148 48.0
Dinv35340 Davidia involucrata HOM05D000156 ORTHO05D005692 8.7e-15 84.3 149 41.6
Dinv29275 Davidia involucrata HOM05D000156 ORTHO05D005692 2.5e-14 82.8 140 44.3
Hma1.2p1_0404F.1_g145330 Hydrangea macrophylla HOM05D000156 ORTHO05D005692 3.3e-14 82.4 147 41.5
Cfa016234 Carpinus fangiana HOM05D000156 ORTHO05D005692 2.8e-13 79.3 139 41.7
CiPaw.05G197300 Carya illinoinensis HOM05D000156 ORTHO05D005692 1.1e-12 77.4 138 39.9
Potri.015G012500 Populus trichocarpa HOM05D000156 ORTHO05D005692 1.1e-12 77.4 143 42.7
MD07G1288000 Malus domestica HOM05D000156 ORTHO05D005692 1.4e-12 77.0 149 38.9
Actinidia34224 Actinidia chinensis HOM05D000156 ORTHO05D005692 1.8e-12 76.6 143 38.5
Sc13g0009910 Simmondsia chinensis HOM05D000156 ORTHO05D005692 2.4e-12 76.3 142 42.3
Rhsim09G0205900 Rhododendron simsii HOM05D000156 ORTHO05D005692 5.3e-12 75.1 134 40.3
CSS0002181 Camellia sinensis var. sinensis HOM05D000156 ORTHO05D005692 6.9e-12 74.7 137 43.8
Nn1g00265 Nelumbo nucifera HOM05D000156 ORTHO05D005692 9.0e-12 74.3 166 34.3
Potri.012G016200 Populus trichocarpa HOM05D000156 ORTHO05D005692 1.2e-11 73.9 142 40.8
vmacro10124 Vaccinium macrocarpon HOM05D000156 ORTHO05D005692 1.5e-11 73.6 134 42.5
RcHm_v2.0_Chr1g0380521 Rosa chinensis HOM05D000156 ORTHO05D005692 2.0e-11 73.2 133 41.4
Prupe.2G309500 Prunus persica HOM05D000156 ORTHO05D005692 2.6e-11 72.8 144 41.7
Atru.chr12.2221 Acer truncatum HOM05D000156 ORTHO05D005692 3.4e-11 72.4 150 39.3
TAR629G1391 Trochodendron aralioides HOM05D000156 ORTHO05D005692 3.4e-11 72.4 147 38.8
Carub.0005s1548 Capsella rubella HOM05D000156 ORTHO05D005692 4.5e-11 72.0 162 38.3
Eucgr.A01455 Eucalyptus grandis HOM05D000156 ORTHO05D005692 4.5e-11 72.0 147 38.1
QL09p008741 Quercus lobata HOM05D000156 ORTHO05D005692 4.5e-11 72.0 174 37.9
Haze_00207 Corylus avellana HOM05D000156 ORTHO05D005692 5.8e-11 71.6 139 38.8
FAN01G1839 Fragaria x ananassa HOM05D000156 ORTHO05D005692 5.8e-11 71.6 133 41.4
Manes.01G183800 Manihot esculenta HOM05D000156 ORTHO05D005692 5.8e-11 71.6 141 41.1
FvH4_7g31490 Fragaria vesca HOM05D000156 ORTHO05D005692 1.3e-10 70.5 140 40.0
FAN06G2724 Fragaria x ananassa HOM05D000156 ORTHO05D005692 1.3e-10 70.5 133 41.4
Lj3A904T80 Lonicera japonica HOM05D000156 ORTHO05D005692 1.7e-10 70.1 146 38.4
Psat6g034760 Pisum sativum HOM05D000156 ORTHO05D005692 2.2e-10 69.7 149 38.3
GSVIVG01038556001 Vitis vinifera HOM05D000156 ORTHO05D005692 2.2e-10 69.7 147 38.1
Aqoxy7G00069 Aquilegia oxysepala HOM05D000156 ORTHO05D005692 2.9e-10 69.3 154 37.7
AL5G29010 Arabidopsis lyrata HOM05D000156 ORTHO05D005692 2.9e-10 69.3 162 38.3
FAN10G0121 Fragaria x ananassa HOM05D000156 ORTHO05D005692 2.9e-10 69.3 133 39.1
FAN10G3506 Fragaria x ananassa HOM05D000156 ORTHO05D005692 2.9e-10 69.3 133 39.1
CAN.G312.4 Capsicum annuum HOM05D000156 ORTHO05D005692 3.8e-10 68.9 120 40.0
AT3G49260 Arabidopsis thaliana HOM05D000156 ORTHO05D005692 4.9e-10 68.6 162 38.3
Peaxi162Scf00740g00112 Petunia axillaris HOM05D000156 ORTHO05D005692 4.9e-10 68.6 145 39.3
Cpa.g.sc3.92 Carica papaya HOM05D000156 ORTHO05D005692 1.1e-09 67.4 146 36.3
FAN03G3454 Fragaria x ananassa HOM05D000156 ORTHO05D005692 1.1e-09 67.4 133 39.8
FAN06G0347 Fragaria x ananassa HOM05D000156 ORTHO05D005692 1.1e-09 67.4 133 40.6
CiPaw.06G045900 Carya illinoinensis HOM05D000156 ORTHO05D005692 1.4e-09 67.0 138 40.6
MD01G1218100 Malus domestica HOM05D000156 ORTHO05D005692 1.4e-09 67.0 170 32.4
Sabra12G0015800 Salix brachista HOM05D000156 ORTHO05D005692 1.4e-09 67.0 126 43.7
Sabra15G0010200 Salix brachista HOM05D000156 ORTHO05D005692 1.4e-09 67.0 132 40.2
CANSAT21G2206 Cannabis sativa HOM05D000156 ORTHO05D005692 2.4e-09 66.2 160 40.0
Nitab4.5_0005393g0020 Nicotiana tabacum HOM05D000156 ORTHO05D005692 2.4e-09 66.2 171 35.1
CARHR158130 Cardamine hirsuta HOM05D000156 ORTHO05D005692 4.2e-09 65.5 162 37.0
Lj1C1018T7 Lonicera japonica HOM05D000156 ORTHO05D005692 4.2e-09 65.5 127 42.5
Lj1C1021T2 Lonicera japonica HOM05D000156 ORTHO05D005692 4.2e-09 65.5 127 42.5
Actinidia08652 Actinidia chinensis HOM05D000156 ORTHO05D005692 9.3e-09 64.3 143 37.1
Manes.02G143900 Manihot esculenta HOM05D000156 ORTHO05D005692 9.3e-09 64.3 138 41.3
Nitab4.5_0007005g0030 Nicotiana tabacum HOM05D000156 ORTHO05D005692 9.3e-09 64.3 143 38.5
TPR.G11989 Trifolium pratense HOM05D000156 ORTHO05D005692 9.3e-09 64.3 145 37.2
ClCG05G008970 Citrullus lanatus HOM05D000156 ORTHO05D005692 1.2e-08 63.9 140 39.3
DCAR_020324 Daucus carota HOM05D000156 ORTHO05D005692 1.2e-08 63.9 155 35.5
Thhalv10010338m.g Eutrema salsugineum HOM05D000156 ORTHO05D005692 1.2e-08 63.9 161 36.0
MBI06_g13418_MAGBIO Magnolia biondii HOM05D000156 ORTHO05D005692 1.2e-08 63.9 150 41.3
PGR042G0912 Punica granatum HOM05D000156 ORTHO05D005692 1.2e-08 63.9 142 40.1
SalBow4G2739 Salvia bowleyana HOM05D000156 ORTHO05D005692 1.2e-08 63.9 139 37.4
TWI14G0702 Tripterygium wilfordii HOM05D000156 ORTHO05D005692 1.6e-08 63.5 166 35.5
BcaB01g00733 Brassica carinata HOM05D000156 ORTHO05D005692 2.1e-08 63.2 161 35.4
Duzib205G0054 Durio zibethinus HOM05D000156 ORTHO05D005692 2.1e-08 63.2 129 44.2
Gohir.A12G249600 Gossypium hirsutum HOM05D000156 ORTHO05D005692 2.1e-08 63.2 139 40.3
Gohir.A08G095724 Gossypium hirsutum HOM05D000156 ORTHO05D005692 2.7e-08 62.8 136 41.2
Ca_12790_v3 Cicer arietinum L. HOM05D000156 ORTHO05D005692 3.5e-08 62.4 150 38.0
Duzib084G0055 Durio zibethinus HOM05D000156 ORTHO05D005692 3.5e-08 62.4 129 39.5
Medtr1g007920 Medicago truncatula HOM05D000156 ORTHO05D005692 3.5e-08 62.4 152 34.9
Sed0003090 Sechium edule HOM05D000156 ORTHO05D005692 3.5e-08 62.4 145 37.2
Sed0011018 Sechium edule HOM05D000156 ORTHO05D005692 3.5e-08 62.4 140 35.7
Ciclev10019884m.g Citrus clementina HOM05D000156 ORTHO05D005692 6.0e-08 61.6 144 38.2
DCAR_008942 Daucus carota HOM05D000156 ORTHO05D005692 7.9e-08 61.2 162 36.4
Glyma.14G159300 Glycine max HOM05D000156 ORTHO05D005692 1.0e-07 60.8 150 36.7
Nn3g18974 Nelumbo nucifera HOM05D000156 ORTHO05D005692 1.0e-07 60.8 149 36.2
MELO3C008499.2 Cucumis melo HOM05D000156 ORTHO05D005692 1.8e-07 60.1 140 37.9
Oeu037178.1 Olea europaea HOM05D000156 ORTHO05D005692 3.0e-07 59.3 139 36.0
Oeu037179.1 Olea europaea HOM05D000156 ORTHO05D005692 3.0e-07 59.3 139 36.0
Sp5g12820 Schrenkiella parvula HOM05D000156 ORTHO05D005692 3.0e-07 59.3 164 35.4
Aa31LG4G17670 Aethionema arabicum HOM05D000156 ORTHO05D005692 3.9e-07 58.9 164 33.5
A06p18500 Brassica napus HOM05D000156 ORTHO05D005692 3.9e-07 58.9 161 34.8
CsaV3_3G019820 Cucumis sativus L. HOM05D000156 ORTHO05D005692 3.9e-07 58.9 138 36.2
HanXRQChr01g0020471 Helianthus annuus HOM05D000156 ORTHO05D005692 3.9e-07 58.9 137 35.0
Thecc.03G199800 Theobroma cacao HOM05D000156 ORTHO05D005692 3.9e-07 58.9 129 40.3
BraA06t24928Z Brassica rapa HOM05D000156 ORTHO05D005692 5.1e-07 58.5 161 35.4
CAN.G481.15 Capsicum annuum HOM05D000156 ORTHO05D005692 5.1e-07 58.5 141 36.2
Gohir.D12G250400 Gossypium hirsutum HOM05D000156 ORTHO05D005692 5.1e-07 58.5 139 39.6
Gorai.008G268500 Gossypium raimondii HOM05D000156 ORTHO05D005692 5.1e-07 58.5 139 39.6
Lj1g0012037 Lotus japonicus HOM05D000156 ORTHO05D005692 5.1e-07 58.5 184 33.2
TAR375G0133 Trochodendron aralioides HOM05D000156 ORTHO05D005692 5.1e-07 58.5 161 37.9
Gorai.004G114300 Gossypium raimondii HOM05D000156 ORTHO05D005692 6.7e-07 58.2 136 38.2
ATR0602G248 Amborella trichopoda HOM05D000156 ORTHO05D005692 1.9e-06 56.6 141 34.8
arahy.Tifrunner.gnm1.ann1.129FS0 Arachis hypogaea HOM05D000156 ORTHO05D005692 3.3e-06 55.8 150 33.3
Sopen03g022890 Solanum pennellii HOM05D000156 ORTHO05D005692 3.3e-06 55.8 143 35.0
Gohir.D08G107000 Gossypium hirsutum HOM05D000156 ORTHO05D005692 4.3e-06 55.5 136 37.5
Phvul.009G052200 Phaseolus vulgaris HOM05D000156 ORTHO05D005692 5.6e-06 55.1 145 35.9
PGSC0003DMG400009086 Solanum tuberosum HOM05D000156 ORTHO05D005692 9.6e-06 54.3 171 32.2


User provided reference genes

Program Settings