Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund11650 Selenicereus undatus HOM05D002242 ORTHO05D002275 5.1e-120 434.5 229 100.0
EL10Ac3g05266 Beta vulgaris HOM05D002242 ORTHO05D002275 1.9e-29 133.7 216 44.0
MELO3C008501.2 Cucumis melo HOM05D002242 ORTHO05D002275 5.1e-19 99.0 220 34.5
PGR142G4389 Punica granatum HOM05D002242 ORTHO05D002275 9.6e-18 94.7 222 38.3
TAR425G0001 Trochodendron aralioides HOM05D002242 ORTHO05D002275 9.6e-18 94.7 227 37.0
TAR636G3588 Trochodendron aralioides HOM05D002242 ORTHO05D002275 2.1e-17 93.6 236 35.2
Dinv29268 Davidia involucrata HOM05D002242 ORTHO05D002275 1.4e-16 90.9 213 35.7
ClCG05G008990 Citrullus lanatus HOM05D002242 ORTHO05D002275 1.8e-16 90.5 216 35.6
CsaV3_3G019790 Cucumis sativus L. HOM05D002242 ORTHO05D002275 1.8e-16 90.5 220 33.6
Duzib205G1627 Durio zibethinus HOM05D002242 ORTHO05D002275 1.2e-15 87.8 230 36.5
Ah.13g070390 Amaranthus hybridus HOM05D002242 ORTHO05D002275 2.0e-15 87.0 128 43.8
Nn1g00284 Nelumbo nucifera HOM05D002242 ORTHO05D002275 2.0e-15 87.0 228 38.2
QL09p008666 Quercus lobata HOM05D002242 ORTHO05D002275 3.4e-15 86.3 216 33.8
MD07G1286900 Malus domestica HOM05D002242 ORTHO05D002275 1.3e-14 84.3 216 34.7
PSO782G1347 Papaver somniferum HOM05D002242 ORTHO05D002275 1.7e-14 84.0 233 32.6
Duzib084G0563 Durio zibethinus HOM05D002242 ORTHO05D002275 4.9e-14 82.4 221 33.5
Aqoxy4G02751 Aquilegia oxysepala HOM05D002242 ORTHO05D002275 1.1e-13 81.3 226 32.7
Cfa016239 Carpinus fangiana HOM05D002242 ORTHO05D002275 1.4e-13 80.9 215 35.8
Prupe.2G309000 Prunus persica HOM05D002242 ORTHO05D002275 5.4e-13 79.0 208 35.6
PSO478G1176 Papaver somniferum HOM05D002242 ORTHO05D002275 7.1e-13 78.6 233 32.2
Hma1.2p1_0404F.1_g145270 Hydrangea macrophylla HOM05D002242 ORTHO05D002275 9.3e-13 78.2 98 51.0
Hma1.2p1_1587F.1_g292270 Hydrangea macrophylla HOM05D002242 ORTHO05D002275 9.3e-13 78.2 98 51.0
SalBow2G3365 Salvia bowleyana HOM05D002242 ORTHO05D002275 9.3e-13 78.2 113 44.2
Actinidia08657 Actinidia chinensis HOM05D002242 ORTHO05D002275 1.2e-12 77.8 208 34.1
Psat6g034840 Pisum sativum HOM05D002242 ORTHO05D002275 1.6e-12 77.4 215 31.6
Sc25g0000930 Simmondsia chinensis HOM05D002242 ORTHO05D002275 2.1e-12 77.0 107 48.6
Ciclev10021848m.g Citrus clementina HOM05D002242 ORTHO05D002275 3.5e-12 76.3 124 41.9
FvH4_7g31360 Fragaria vesca HOM05D002242 ORTHO05D002275 3.5e-12 76.3 208 33.7
FAN06G3788 Fragaria x ananassa HOM05D002242 ORTHO05D002275 3.5e-12 76.3 208 33.7
FAN06G4446 Fragaria x ananassa HOM05D002242 ORTHO05D002275 3.5e-12 76.3 208 33.7
CANSAT21G1534 Cannabis sativa HOM05D002242 ORTHO05D002275 4.6e-12 75.9 220 30.5
Sed0023472 Sechium edule HOM05D002242 ORTHO05D002275 4.6e-12 75.9 221 35.3
Thecc.03G200400 Theobroma cacao HOM05D002242 ORTHO05D002275 6.0e-12 75.5 219 32.9
Manes.02G144300 Manihot esculenta HOM05D002242 ORTHO05D002275 7.8e-12 75.1 233 35.6
MBI06_g38007_MAGBIO Magnolia biondii HOM05D002242 ORTHO05D002275 1.0e-11 74.7 228 31.6
Sabra15G0009600 Salix brachista HOM05D002242 ORTHO05D002275 1.3e-11 74.3 218 33.0
Ca_12786_v3 Cicer arietinum L. HOM05D002242 ORTHO05D002275 1.7e-11 73.9 180 33.9
Rhsim03G0209500 Rhododendron simsii HOM05D002242 ORTHO05D002275 3.0e-11 73.2 147 40.8
FAN03G3456 Fragaria x ananassa HOM05D002242 ORTHO05D002275 3.9e-11 72.8 209 33.0
Gohir.A12G249200 Gossypium hirsutum HOM05D002242 ORTHO05D002275 3.9e-11 72.8 218 34.9
Gohir.D12G250000 Gossypium hirsutum HOM05D002242 ORTHO05D002275 3.9e-11 72.8 226 34.5
Gorai.008G268100 Gossypium raimondii HOM05D002242 ORTHO05D002275 3.9e-11 72.8 218 35.8
GSVIVG01038561001 Vitis vinifera HOM05D002242 ORTHO05D002275 5.1e-11 72.4 92 45.7
MD01G1217700 Malus domestica HOM05D002242 ORTHO05D002275 6.6e-11 72.0 212 32.5
Phvul.001G075100 Phaseolus vulgaris HOM05D002242 ORTHO05D002275 6.6e-11 72.0 229 31.4
Haze_00202 Corylus avellana HOM05D002242 ORTHO05D002275 8.7e-11 71.6 223 33.2
CAN.G481.20 Capsicum annuum HOM05D002242 ORTHO05D002275 1.5e-10 70.9 242 33.5
Oeu060992.1 Olea europaea HOM05D002242 ORTHO05D002275 1.5e-10 70.9 221 31.7
Lj4g0010373 Lotus japonicus HOM05D002242 ORTHO05D002275 1.9e-10 70.5 217 30.0
CiPaw.06G045500 Carya illinoinensis HOM05D002242 ORTHO05D002275 3.3e-10 69.7 228 31.1
Peaxi162Scf00740g00136 Petunia axillaris HOM05D002242 ORTHO05D002275 3.3e-10 69.7 224 34.8
MSTRG.8647 Avicennia marina HOM05D002242 ORTHO05D002275 4.3e-10 69.3 105 41.9
Atru.chr12.2237 Acer truncatum HOM05D002242 ORTHO05D002275 5.6e-10 68.9 234 31.6
FAN01G0248 Fragaria x ananassa HOM05D002242 ORTHO05D002275 9.6e-10 68.2 101 43.6
Nitab4.5_0005514g0010 Nicotiana tabacum HOM05D002242 ORTHO05D002275 9.6e-10 68.2 98 48.0
vmacro06390 Vaccinium macrocarpon HOM05D002242 ORTHO05D002275 1.6e-09 67.4 221 33.5
Nitab4.5_0007888g0030 Nicotiana tabacum HOM05D002242 ORTHO05D002275 2.8e-09 66.6 98 49.0
Potri.012G016700 Populus trichocarpa HOM05D002242 ORTHO05D002275 3.6e-09 66.2 100 43.0
Potri.015G011900 Populus trichocarpa HOM05D002242 ORTHO05D002275 3.6e-09 66.2 112 42.9
SGA_v2.0_scaffold44G16810 Striga asiatica HOM05D002242 ORTHO05D002275 6.2e-09 65.5 106 39.6
RcHm_v2.0_Chr1g0380431 Rosa chinensis HOM05D002242 ORTHO05D002275 1.4e-08 64.3 211 30.8
Medtr1g007905 Medicago truncatula HOM05D002242 ORTHO05D002275 2.4e-08 63.5 220 28.2
Manes.01G184600 Manihot esculenta HOM05D002242 ORTHO05D002275 6.9e-08 62.0 230 33.9
TPR.G12108 Trifolium pratense HOM05D002242 ORTHO05D002275 9.0e-08 61.6 220 30.5
Ca_12789_v3 Cicer arietinum L. HOM05D002242 ORTHO05D002275 1.5e-07 60.8 168 32.1
BolC7t46052H Brassica oleracea HOM05D002242 ORTHO05D002275 2.0e-07 60.5 211 29.4
Oeu041061.1 Olea europaea HOM05D002242 ORTHO05D002275 2.6e-07 60.1 94 43.6
C07p55720 Brassica napus HOM05D002242 ORTHO05D002275 3.4e-07 59.7 211 28.9
Eucgr.H01540 Eucalyptus grandis HOM05D002242 ORTHO05D002275 3.4e-07 59.7 98 38.8
Eucgr.H01594 Eucalyptus grandis HOM05D002242 ORTHO05D002275 3.4e-07 59.7 98 38.8
CSS0025234 Camellia sinensis var. sinensis HOM05D002242 ORTHO05D002275 4.4e-07 59.3 222 36.0
CiPaw.05G197700 Carya illinoinensis HOM05D002242 ORTHO05D002275 4.4e-07 59.3 182 37.4
Duzib138G1576 Durio zibethinus HOM05D002242 ORTHO05D002275 4.4e-07 59.3 228 30.7
TPR.G18779 Trifolium pratense HOM05D002242 ORTHO05D002275 4.4e-07 59.3 179 29.1
Lsat_1_v5_gn_8_5280 Lactuca sativa HOM05D002546 ORTHO05D002671 5.8e-07 58.9 58 50.0
TWI59G0079 Tripterygium wilfordii HOM05D002242 ORTHO05D002275 5.8e-07 58.9 100 42.0
Migut.F01023 Erythranthe guttata HOM05D002242 ORTHO05D002275 7.6e-07 58.5 115 40.0
TWI39G0876 Tripterygium wilfordii HOM05D002242 ORTHO05D002275 7.6e-07 58.5 231 32.0
TWI14G0218 Tripterygium wilfordii HOM05D002242 ORTHO05D002275 9.9e-07 58.2 98 40.8
Cpa.g.sc3.97 Carica papaya HOM05D002242 ORTHO05D002275 1.7e-06 57.4 218 33.9
Dinv37328 Davidia involucrata HOM05D002242 ORTHO05D002275 3.8e-06 56.2 100 41.0
Glyma.06G129800 Glycine max HOM05D002242 ORTHO05D002275 3.8e-06 56.2 220 28.2
Gohir.A03G051900 Gossypium hirsutum HOM05D002242 ORTHO05D002275 3.8e-06 56.2 105 39.0
PGSC0003DMG400018549 Solanum tuberosum HOM05D002242 ORTHO05D002275 3.8e-06 56.2 205 31.2
VMungo0647G2336 Vigna mungo HOM05D002242 ORTHO05D002275 3.8e-06 56.2 106 39.6
CiPaw.01G077500 Carya illinoinensis HOM05D002242 ORTHO05D002275 4.9e-06 55.8 227 28.6
Hma1.2p1_0101F.1_g049310 Hydrangea macrophylla HOM05D002242 ORTHO05D002275 4.9e-06 55.8 105 35.2
DCAR_025263 Daucus carota HOM05D002242 ORTHO05D002275 6.4e-06 55.5 103 37.9
Gohir.A11G097800 Gossypium hirsutum HOM05D002242 ORTHO05D002275 6.4e-06 55.5 99 36.4
COL.COLO4_16773 Corchorus olitorius HOM05D002242 ORTHO05D002275 8.4e-06 55.1 112 41.1
Gohir.D11G102500 Gossypium hirsutum HOM05D002242 ORTHO05D002275 8.4e-06 55.1 99 35.4
Lalb_Chr08g0240171 Lupinus albus HOM05D002242 ORTHO05D002275 8.4e-06 55.1 114 38.6
Oeu004983.1 Olea europaea HOM05D002242 ORTHO05D002275 8.4e-06 55.1 130 32.3


User provided reference genes

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