Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund11428 Selenicereus undatus HOM05D001976 ORTHO05D001960 4.6e-117 424.9 260 100.0
Actinidia27357 Actinidia chinensis HOM05D001976 ORTHO05D001960 1.7e-18 97.4 341 30.2
Sc01g0009940 Simmondsia chinensis HOM05D001976 ORTHO05D001960 5.4e-17 92.4 392 39.0
Hund14258 Selenicereus undatus HOM05D001976 ORTHO05D001960 6.0e-16 89.0 383 36.8
FAN08G2781 Fragaria x ananassa HOM05D001976 ORTHO05D001960 7.8e-16 88.6 385 34.3
FAN13G2994 Fragaria x ananassa HOM05D001976 ORTHO05D001960 2.3e-15 87.0 379 30.6
FAN04G0634 Fragaria x ananassa HOM05D001976 ORTHO05D001960 6.6e-15 85.5 379 30.1
FAN04G1876 Fragaria x ananassa HOM05D001976 ORTHO05D001960 8.6e-15 85.1 378 28.3
CSS0004562 Camellia sinensis var. sinensis HOM05D001976 ORTHO05D001960 1.1e-14 84.7 279 33.0
MSTRG.25640 Avicennia marina HOM05D001976 ORTHO05D001960 3.3e-14 83.2 394 29.4
CSS0030727 Camellia sinensis var. sinensis HOM05D001976 ORTHO05D001960 5.6e-14 82.4 312 31.7
FAN18G1913 Fragaria x ananassa HOM05D001976 ORTHO05D001960 2.8e-13 80.1 372 30.9
Actinidia08600 Actinidia chinensis HOM05D001976 ORTHO05D001960 6.8e-12 75.5 308 30.5
unitig_46.g18541 Utricularia gibba HOM05D001976 ORTHO05D001960 6.8e-12 75.5 320 28.8
Actinidia31851 Actinidia chinensis HOM05D001976 ORTHO05D001960 8.9e-12 75.1 303 32.3
FAN13G0870 Fragaria x ananassa HOM05D001976 ORTHO05D001960 2.0e-11 73.9 372 29.8
Nn7g37309 Nelumbo nucifera HOM05D001976 ORTHO05D001960 2.0e-11 73.9 198 35.4
FvH4_5g03470 Fragaria vesca HOM05D001976 ORTHO05D001960 2.6e-11 73.6 382 30.4
Lj4g0026616 Lotus japonicus HOM05D001976 ORTHO05D001960 3.4e-11 73.2 358 27.4
Oeu011796.1 Olea europaea HOM05D001976 ORTHO05D001960 3.4e-11 73.2 378 30.4
FAN18G1918 Fragaria x ananassa HOM05D001976 ORTHO05D001960 5.8e-11 72.4 382 30.1
Actinidia34172 Actinidia chinensis HOM05D001976 ORTHO05D001960 7.5e-11 72.0 294 30.3
Actinidia10617 Actinidia chinensis HOM05D001976 ORTHO05D001960 9.8e-11 71.6 383 28.5
TAR636G0380 Trochodendron aralioides HOM05D001976 ORTHO05D001960 1.3e-10 71.2 369 27.1
Actinidia03149 Actinidia chinensis HOM05D001976 ORTHO05D001960 1.7e-10 70.9 311 32.2
Duzib068G0824 Durio zibethinus HOM05D001976 ORTHO05D001960 2.2e-10 70.5 386 27.5
Haze_08732 Corylus avellana HOM05D001976 ORTHO05D001960 4.9e-10 69.3 188 35.1
Gohir.D12G234501 Gossypium hirsutum HOM05D001976 ORTHO05D001960 4.9e-10 69.3 401 28.7
Gorai.008G250800 Gossypium raimondii HOM05D001976 ORTHO05D001960 4.9e-10 69.3 182 35.2
Manes.02G015825 Manihot esculenta HOM05D001976 ORTHO05D001960 6.4e-10 68.9 421 26.1
CiPaw.06G005400 Carya illinoinensis HOM05D001976 ORTHO05D001960 8.3e-10 68.6 137 41.6
Dinv35286 Davidia involucrata HOM05D001976 ORTHO05D001960 8.3e-10 68.6 310 31.6
QL09p012141 Quercus lobata HOM05D001976 ORTHO05D001960 8.3e-10 68.6 154 36.4
Sed0014014 Sechium edule HOM05D001976 ORTHO05D001960 1.1e-09 68.2 175 34.3
EL10Ac5g12847 Beta vulgaris HOM05D001976 ORTHO05D001960 1.4e-09 67.8 160 40.6
Cfa016322 Carpinus fangiana HOM05D001976 ORTHO05D001960 1.4e-09 67.8 136 42.6
ClCG07G007760 Citrullus lanatus HOM05D001976 ORTHO05D001960 1.4e-09 67.8 51 66.7
Duzib205G1380 Durio zibethinus HOM05D001976 ORTHO05D001960 1.4e-09 67.8 187 34.8
TAR374G0991 Trochodendron aralioides HOM05D001976 ORTHO05D001960 1.4e-09 67.8 70 52.9
Ah.07g196780 Amaranthus hybridus HOM05D001976 ORTHO05D001960 1.9e-09 67.4 343 31.8
MSTRG.11949 Avicennia marina HOM05D001976 ORTHO05D001960 1.9e-09 67.4 184 38.0
CiPaw.11G127900 Carya illinoinensis HOM05D001976 ORTHO05D001960 1.9e-09 67.4 52 67.3
Dinv28365 Davidia involucrata HOM05D001976 ORTHO05D001960 1.9e-09 67.4 156 38.5
Gohir.A12G232900 Gossypium hirsutum HOM05D001976 ORTHO05D001960 1.9e-09 67.4 181 34.8
Hma1.2p1_0327F.1_g126540 Hydrangea macrophylla HOM05D001976 ORTHO05D001960 1.9e-09 67.4 308 30.8
Cc08_g15410 Coffea canephora HOM05D001976 ORTHO05D001960 2.4e-09 67.0 398 28.4
Haze_00075 Corylus avellana HOM05D001976 ORTHO05D001960 2.4e-09 67.0 136 41.2
Glyma.05G212700 Glycine max HOM05D001976 ORTHO05D001960 3.2e-09 66.6 174 37.4
Hma1.2p1_0216F.1_g091200 Hydrangea macrophylla HOM05D001976 ORTHO05D001960 3.2e-09 66.6 75 52.0
Sabra01G0073300 Salix brachista HOM05D001976 ORTHO05D001960 3.2e-09 66.6 122 39.3
Thecc.03G288300 Theobroma cacao HOM05D001976 ORTHO05D001960 3.2e-09 66.6 187 34.2
MSTRG.27068 Avicennia marina HOM05D001976 ORTHO05D001960 5.4e-09 65.9 295 29.2
TAR629G3496 Trochodendron aralioides HOM05D001976 ORTHO05D001960 5.4e-09 65.9 194 34.5
Ciclev10020100m.g Citrus clementina HOM05D001976 ORTHO05D001960 7.0e-09 65.5 186 34.4
CsaV3_3G017620 Cucumis sativus L. HOM05D001976 ORTHO05D001960 7.0e-09 65.5 263 27.0
Duzib084G0318 Durio zibethinus HOM05D001976 ORTHO05D001960 7.0e-09 65.5 187 34.8
arahy.Tifrunner.gnm1.ann1.0FHV4T Arachis hypogaea HOM05D001976 ORTHO05D001960 9.2e-09 65.1 160 36.9
CANSAT21G0977 Cannabis sativa HOM05D001976 ORTHO05D001960 9.2e-09 65.1 165 38.2
Cfa012260 Carpinus fangiana HOM05D001976 ORTHO05D001960 9.2e-09 65.1 101 43.6
CsaV3_4G006180 Cucumis sativus L. HOM05D001976 ORTHO05D001960 9.2e-09 65.1 51 64.7
Prupe.5G110000 Prunus persica HOM05D001976 ORTHO05D001960 1.2e-08 64.7 196 34.2
vmacro13981 Vaccinium macrocarpon HOM05D001976 ORTHO05D001960 1.2e-08 64.7 49 63.3
CSS0011463 Camellia sinensis var. sinensis HOM05D001976 ORTHO05D001960 1.6e-08 64.3 74 48.6
GSVIVG01019432001 Vitis vinifera HOM05D001976 ORTHO05D001960 2.1e-08 63.9 71 53.5
DCAR_010648 Daucus carota HOM05D001976 ORTHO05D001960 2.7e-08 63.5 122 39.3
Sabra03G0095800 Salix brachista HOM05D001976 ORTHO05D001960 2.7e-08 63.5 418 26.1
Sed0022791 Sechium edule HOM05D001976 ORTHO05D001960 2.7e-08 63.5 110 40.9
CSS0015961 Camellia sinensis var. sinensis HOM05D001976 ORTHO05D001960 3.5e-08 63.2 74 48.6
Nn1g01713 Nelumbo nucifera HOM05D001976 ORTHO05D001960 4.6e-08 62.8 44 70.5
THA.LOC104809359 Tarenaya hassleriana HOM05D001976 ORTHO05D001960 4.6e-08 62.8 33 87.9
HPP92_023941 Vanilla planifolia HOM05D001976 ORTHO05D001960 4.6e-08 62.8 315 29.2
HPP92_023963 Vanilla planifolia HOM05D001976 ORTHO05D001960 4.6e-08 62.8 315 29.2
CiPaw.05G260400 Carya illinoinensis HOM05D001976 ORTHO05D001960 6.0e-08 62.4 135 38.5
TWI81G0614 Tripterygium wilfordii HOM05D001976 ORTHO05D001960 6.0e-08 62.4 190 34.2
PSO135G0786 Papaver somniferum HOM05D001976 ORTHO05D001960 7.8e-08 62.0 106 39.6
Solyc08g081710.3 Solanum lycopersicum HOM05D001976 ORTHO05D001960 7.8e-08 62.0 416 31.0
Gohir.A02G104500 Gossypium hirsutum HOM05D001976 ORTHO05D001960 1.0e-07 61.6 333 28.2
Manes.14G121828 Manihot esculenta HOM05D001976 ORTHO05D001960 1.0e-07 61.6 203 31.5
Hma1.2p1_0142F.1_g064430 Hydrangea macrophylla HOM05D001976 ORTHO05D001960 1.3e-07 61.2 152 35.5
Potri.012G035700 Populus trichocarpa HOM05D001976 ORTHO05D001960 1.3e-07 61.2 158 38.0
Sopen08g030010 Solanum pennellii HOM05D001976 ORTHO05D001960 1.3e-07 61.2 53 62.3
Ciclev10005237m.g Citrus clementina HOM05D001976 ORTHO05D001960 2.3e-07 60.5 157 36.9
Dinv37579 Davidia involucrata HOM05D001976 ORTHO05D001960 2.3e-07 60.5 420 26.4
Lalb_Chr06g0161391 Lupinus albus HOM05D001976 ORTHO05D001960 2.3e-07 60.5 139 36.0
Sed0000465 Sechium edule HOM05D001976 ORTHO05D001960 2.3e-07 60.5 404 26.2
CDE03G0128 Ceratophyllum demersum HOM05D000100 ORTHO05D000052 3.0e-07 60.1 148 35.8
RcHm_v2.0_Chr7g0196191 Rosa chinensis HOM05D001976 ORTHO05D001960 3.0e-07 60.1 179 35.2
Atru.chr9.2097 Acer truncatum HOM05D001976 ORTHO05D001960 3.9e-07 59.7 70 51.4
Lalb_Chr05g0224421 Lupinus albus HOM05D001976 ORTHO05D001960 3.9e-07 59.7 104 38.5
Potri.001G098000 Populus trichocarpa HOM05D001976 ORTHO05D001960 3.9e-07 59.7 119 37.0
SGA_v2.0_scaffold173G39126 Striga asiatica HOM05D001976 ORTHO05D001960 3.9e-07 59.7 173 35.3
Aa31LG2G1150 Aethionema arabicum HOM05D001976 ORTHO05D001960 5.0e-07 59.3 32 84.4
CSS0020510 Camellia sinensis var. sinensis HOM05D001976 ORTHO05D001960 5.0e-07 59.3 172 33.1
CsaV3_5G000980 Cucumis sativus L. HOM05D001976 ORTHO05D001960 5.0e-07 59.3 111 41.4
PGSC0003DMG400012175 Solanum tuberosum HOM05D001976 ORTHO05D001960 5.0e-07 59.3 53 58.5
Lj2P176T17 Lonicera japonica HOM05D001976 ORTHO05D001960 6.6e-07 58.9 73 49.3
Duzib205G1678 Durio zibethinus HOM05D001976 ORTHO05D001960 8.6e-07 58.5 147 32.7
Gohir.D12G255325 Gossypium hirsutum HOM05D001976 ORTHO05D001960 8.6e-07 58.5 53 62.3
Gorai.003G084800 Gossypium raimondii HOM05D001976 ORTHO05D001960 8.6e-07 58.5 334 27.5
Gorai.008G273000 Gossypium raimondii HOM05D001976 ORTHO05D001960 8.6e-07 58.5 53 62.3
Medtr1g099550 Medicago truncatula HOM05D001976 ORTHO05D001960 8.6e-07 58.5 298 27.9
PSO063G2954 Papaver somniferum HOM05D001976 ORTHO05D001960 8.6e-07 58.5 49 59.2
Sabra12G0024400 Salix brachista HOM05D001976 ORTHO05D001960 8.6e-07 58.5 155 37.4
TWI14G1073 Tripterygium wilfordii HOM05D001976 ORTHO05D001960 8.6e-07 58.5 62 50.0
Sed0005793 Sechium edule HOM05D001976 ORTHO05D001960 1.1e-06 58.2 106 42.5
MSTRG.8694 Avicennia marina HOM05D001976 ORTHO05D001960 1.5e-06 57.8 298 28.2
Ca_10957_v3 Cicer arietinum L. HOM05D001976 ORTHO05D001960 1.5e-06 57.8 62 51.6
THA.LOC104824545 Tarenaya hassleriana HOM05D001976 ORTHO05D001960 1.5e-06 57.8 34 79.4
vmacro11415 Vaccinium macrocarpon HOM05D001976 ORTHO05D001960 1.5e-06 57.8 187 33.7
AUR62019767 Chenopodium quinoa HOM05D051440 ORTHO05D044046 1.9e-06 57.4 99 45.5
MELO3C016332.2 Cucumis melo HOM05D001976 ORTHO05D001960 1.9e-06 57.4 120 36.7
Gohir.A12G254565 Gossypium hirsutum HOM05D001976 ORTHO05D001960 1.9e-06 57.4 53 60.4
Gohir.D03G079300 Gossypium hirsutum HOM05D001976 ORTHO05D001960 1.9e-06 57.4 334 27.5
Eucgr.L01487 Eucalyptus grandis HOM05D001976 ORTHO05D001960 2.5e-06 57.0 46 60.9
Potri.015G027500 Populus trichocarpa HOM05D001976 ORTHO05D001960 2.5e-06 57.0 66 50.0
Prupe.2G303400 Prunus persica HOM05D001976 ORTHO05D001960 2.5e-06 57.0 146 37.0
Sabra15G0022800 Salix brachista HOM05D001976 ORTHO05D001960 2.5e-06 57.0 154 31.8
Sed0003273 Sechium edule HOM05D001976 ORTHO05D001960 2.5e-06 57.0 264 29.9
vmacro06602 Vaccinium macrocarpon HOM05D001976 ORTHO05D001960 2.5e-06 57.0 300 28.0
Duzib084G1151 Durio zibethinus HOM05D001976 ORTHO05D001960 3.3e-06 56.6 65 50.8
ECA238G2726 Erigeron canadensis HOM05D001976 ORTHO05D001960 3.3e-06 56.6 124 38.7
Migut.F00266 Erythranthe guttata HOM05D001976 ORTHO05D001960 3.3e-06 56.6 301 27.9
PSO170G5045 Papaver somniferum HOM05D001976 ORTHO05D001960 3.3e-06 56.6 158 32.9
TWI23G0128 Tripterygium wilfordii HOM05D001976 ORTHO05D001960 3.3e-06 56.6 62 50.0
SalBow1G7906 Salvia bowleyana HOM05D001976 ORTHO05D001960 4.3e-06 56.2 394 23.4
DCAR_020285 Daucus carota HOM05D001976 ORTHO05D001960 5.6e-06 55.8 292 25.3
Lsat_1_v5_gn_2_133481 Lactuca sativa HOM05D001976 ORTHO05D001960 5.6e-06 55.8 297 27.9
MBI07_g11737_MAGBIO Magnolia biondii HOM05D001976 ORTHO05D001960 5.6e-06 55.8 71 50.7
Rhsim03G0195500 Rhododendron simsii HOM05D001976 ORTHO05D001960 5.6e-06 55.8 304 28.3
RhsimUnG0097500 Rhododendron simsii HOM05D001976 ORTHO05D001960 5.6e-06 55.8 304 28.3
Atru.ctg97_1.53 Acer truncatum HOM05D001976 ORTHO05D001960 7.3e-06 55.5 182 33.5
Manes.14G020600 Manihot esculenta HOM05D001976 ORTHO05D001960 7.3e-06 55.5 69 55.1
PGR142G1807 Punica granatum HOM05D001976 ORTHO05D001960 7.3e-06 55.5 200 31.5
MELO3C006946.2 Cucumis melo HOM05D001976 ORTHO05D001960 9.5e-06 55.1 268 27.2
Duzib068G1162 Durio zibethinus HOM05D001976 ORTHO05D001960 9.5e-06 55.1 65 49.2


User provided reference genes

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