Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund11391 Selenicereus undatus HOM05D006572 ORTHO05D008181 1.7e-247 859.4 598 100.0
EL10Ac5g12911 Beta vulgaris HOM05D006572 ORTHO05D008181 1.8e-148 530.4 615 63.1
AUR62010836 Chenopodium quinoa HOM05D006572 ORTHO05D008181 2.6e-123 446.8 597 64.3
AUR62019834 Chenopodium quinoa HOM05D006572 ORTHO05D008181 3.7e-122 443.0 561 61.9
Thecc.03G297200 Theobroma cacao HOM05D006572 ORTHO05D008181 4.7e-117 426.0 596 53.0
Ah.12g052520 Amaranthus hybridus HOM05D006572 ORTHO05D008181 1.2e-115 421.4 590 58.8
Actinidia04204 Actinidia chinensis HOM05D006572 ORTHO05D008181 1.3e-114 417.9 583 61.6
COL.COLO4_10694 Corchorus olitorius HOM05D006572 ORTHO05D008181 2.2e-114 417.2 617 45.7
Gohir.D03G082800 Gossypium hirsutum HOM05D006572 ORTHO05D008181 4.6e-112 409.5 596 54.2
Gorai.003G080600 Gossypium raimondii HOM05D006572 ORTHO05D008181 4.6e-112 409.5 577 61.4
Lj8C208G13 Lonicera japonica HOM05D006572 ORTHO05D008181 7.8e-112 408.7 587 55.5
Aqoxy5G04214 Aquilegia oxysepala HOM05D006572 ORTHO05D008181 8.6e-111 405.2 580 60.2
Duzib205G1524 Durio zibethinus HOM05D006572 ORTHO05D008181 1.9e-110 404.1 591 54.3
Rhsim02G0242800 Rhododendron simsii HOM05D006572 ORTHO05D008181 4.3e-110 402.9 595 55.1
Gohir.A02G101400 Gossypium hirsutum HOM05D006572 ORTHO05D008181 1.4e-108 397.9 577 61.0
Migut.A00646 Erythranthe guttata HOM05D006572 ORTHO05D008181 1.5e-107 394.4 581 55.2
Nn3g19021 Nelumbo nucifera HOM05D006572 ORTHO05D008181 3.4e-107 393.3 588 60.9
VMungo0251G1431 Vigna mungo HOM05D006572 ORTHO05D008181 1.3e-106 391.3 608 47.5
Lj4g0027687 Lotus japonicus HOM05D006572 ORTHO05D008181 3.2e-105 386.7 614 44.3
Lsat_1_v5_gn_6_12380 Lactuca sativa HOM05D006572 ORTHO05D008181 7.1e-105 385.6 591 60.2
CSS0002826 Camellia sinensis var. sinensis HOM05D006572 ORTHO05D008181 1.6e-104 384.4 594 52.2
ECA233G0093 Erigeron canadensis HOM05D006572 ORTHO05D008181 2.1e-104 384.0 585 53.2
Potri.001G092000 Populus trichocarpa HOM05D006572 ORTHO05D008181 6.0e-104 382.5 593 54.5
Manes.02G010400 Manihot esculenta HOM05D006572 ORTHO05D008181 1.7e-103 380.9 581 53.0
PGR042G1206 Punica granatum HOM05D006572 ORTHO05D008181 5.1e-103 379.4 598 59.4
Phvul.002G297700 Phaseolus vulgaris HOM05D006572 ORTHO05D008181 1.1e-102 378.3 595 51.3
Medtr8g099415 Medicago truncatula HOM05D006572 ORTHO05D008181 1.2e-101 374.8 589 43.1
MSTRG.25670 Avicennia marina HOM05D006572 ORTHO05D008181 1.1e-100 371.7 575 51.8
Lalb_Chr05g0224161 Lupinus albus HOM05D006572 ORTHO05D008181 1.1e-100 371.7 595 49.1
GSVIVG01019526001 Vitis vinifera HOM05D006572 ORTHO05D008181 1.4e-100 371.3 578 55.4
FAN04G0113 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.8e-100 370.9 608 38.5
Prupe.5G118200 Prunus persica HOM05D006572 ORTHO05D008181 1.8e-100 370.9 591 50.1
TWI60G0540 Tripterygium wilfordii HOM05D006572 ORTHO05D008181 3.1e-100 370.2 582 53.4
FAN18G3438 Fragaria x ananassa HOM05D006572 ORTHO05D008181 5.2e-100 369.4 606 39.8
Nitab4.5_0005537g0050 Nicotiana tabacum HOM05D006572 ORTHO05D008181 1.2e-99 368.2 592 47.3
FAN18G4203 Fragaria x ananassa HOM05D006572 ORTHO05D008181 1.5e-99 367.9 618 42.6
PSO384G1203 Papaver somniferum HOM05D006572 ORTHO05D008181 1.7e-98 364.4 596 53.5
TAR636G1103 Trochodendron aralioides HOM05D006572 ORTHO05D008181 2.9e-98 363.6 515 67.2
Eucgr.E00859 Eucalyptus grandis HOM05D006572 ORTHO05D008181 2.4e-97 360.5 585 50.1
Sabra01G0068400 Salix brachista HOM05D006572 ORTHO05D008181 4.2e-97 359.8 577 53.6
Glyma.05G216500 Glycine max HOM05D006572 ORTHO05D008181 9.3e-97 358.6 595 49.2
Duzib068G0791 Durio zibethinus HOM05D006572 ORTHO05D008181 1.6e-96 357.8 587 51.1
MD14G1128100 Malus domestica HOM05D006572 ORTHO05D008181 1.7e-95 354.4 585 54.4
FvH4_5g04510 Fragaria vesca HOM05D006572 ORTHO05D008181 7.3e-94 349.0 608 41.9
HanXRQChr02g0047891 Helianthus annuus HOM05D006572 ORTHO05D008181 1.3e-93 348.2 589 52.3
Psat7g026640 Pisum sativum HOM05D006572 ORTHO05D008181 6.2e-93 345.9 588 49.3
CiPaw.12G083500 Carya illinoinensis HOM05D006572 ORTHO05D008181 3.8e-90 336.7 578 52.9
MBI06_g08449_MAGBIO Magnolia biondii HOM05D006572 ORTHO05D008181 8.4e-90 335.5 537 49.9
SalBow1G0494 Salvia bowleyana HOM05D006572 ORTHO05D008181 1.1e-89 335.1 552 49.1
SGA_v2.0_scaffold96G28963 Striga asiatica HOM05D006572 ORTHO05D008181 4.2e-89 333.2 606 49.7
Peaxi162Scf00074g00932 Petunia axillaris HOM05D006572 ORTHO05D008181 1.6e-88 331.3 588 44.7
Oeu031670.2 Olea europaea HOM05D006572 ORTHO05D008181 3.5e-88 330.1 612 49.0
Nitab4.5_0001231g0070 Nicotiana tabacum HOM05D006572 ORTHO05D008181 1.0e-87 328.6 613 45.0
CANSAT21G1897 Cannabis sativa HOM05D006572 ORTHO05D008181 2.3e-87 327.4 593 55.0
A03p54790 Brassica napus HOM05D006572 ORTHO05D008181 3.9e-87 326.6 590 51.0
BraA03t14546Z Brassica rapa HOM05D006572 ORTHO05D008181 3.9e-87 326.6 590 51.0
Ciclev10019283m.g Citrus clementina HOM05D006572 ORTHO05D008181 1.1e-86 325.1 630 45.6
Solyc08g082270.3 Solanum lycopersicum HOM05D006572 ORTHO05D008181 3.7e-85 320.1 579 51.3
arahy.Tifrunner.gnm1.ann1.GR96MW Arachis hypogaea HOM05D006572 ORTHO05D008181 8.1e-85 318.9 592 53.7
Cc08_g16020 Coffea canephora HOM05D006572 ORTHO05D008181 2.4e-84 317.4 602 50.5
FAN08G2039 Fragaria x ananassa HOM05D006572 ORTHO05D008181 4.0e-84 316.6 614 39.9
Sopen08g030540 Solanum pennellii HOM05D006572 ORTHO05D008181 5.3e-84 316.2 579 50.8
Dinv37535 Davidia involucrata HOM05D006572 ORTHO05D008181 6.9e-84 315.8 327 57.8
BcaNung04237 Brassica carinata HOM05D006572 ORTHO05D008181 2.6e-83 313.9 583 49.2
C07p53150 Brassica napus HOM05D006572 ORTHO05D008181 2.6e-83 313.9 583 49.2
TAR629G2735 Trochodendron aralioides HOM05D006572 ORTHO05D008181 3.4e-83 313.5 388 60.3
PGSC0003DMG400012287 Solanum tuberosum HOM05D006572 ORTHO05D008181 4.5e-83 313.2 579 49.7
SHI08936 Sapria himalayana HOM05D006572 ORTHO05D008181 3.8e-82 310.1 610 43.1
arahy.Tifrunner.gnm1.ann1.Z469MH Arachis hypogaea HOM05D006572 ORTHO05D008181 1.4e-81 308.1 592 53.0
BolC7t45811H Brassica oleracea HOM05D006572 ORTHO05D008181 3.2e-81 307.0 583 48.9
RcHm_v2.0_Chr7g0194941 Rosa chinensis HOM05D006572 ORTHO05D008181 1.0e-79 302.0 598 48.2
ClCG07G015010 Citrullus lanatus HOM05D006572 ORTHO05D008181 1.9e-78 297.7 578 54.0
CARHR231220 Cardamine hirsuta HOM05D006572 ORTHO05D008181 3.3e-78 297.0 589 49.4
vmacro11428 Vaccinium macrocarpon HOM05D006572 ORTHO05D008181 5.6e-78 296.2 593 47.4
ATR0188G004 Amborella trichopoda HOM05D006572 ORTHO05D008181 6.9e-76 289.3 578 47.9
DCAR_029886 Daucus carota HOM05D006572 ORTHO05D008181 2.0e-75 287.7 588 41.5
MELO3C016288.2 Cucumis melo HOM05D006572 ORTHO05D008181 6.0e-72 276.2 609 44.3
Sed0014568 Sechium edule HOM05D006572 ORTHO05D008181 1.0e-71 275.4 547 46.8
Dinv38835 Davidia involucrata HOM05D006572 ORTHO05D008181 1.9e-70 271.2 478 51.7
Sc22g0005020 Simmondsia chinensis HOM05D006572 ORTHO05D008181 5.7e-70 269.6 478 54.6
AT4G23840 Arabidopsis thaliana HOM05D006572 ORTHO05D008181 2.1e-69 267.7 586 51.7
HPP92_024023 Vanilla planifolia HOM05D006572 ORTHO05D008181 3.7e-69 266.9 584 53.3
Os05g0212200 Oryza sativa ssp. japonica HOM05D006572 ORTHO05D008181 6.3e-69 266.2 577 46.6
SEGI_00989 Sequoiadendron giganteum HOM05D006572 ORTHO05D008181 2.4e-68 264.2 582 50.7
Haze_08618 Corylus avellana HOM05D006572 ORTHO05D008181 9.0e-68 262.3 551 44.1
Atru.BG.201.p Acer truncatum HOM05D006572 ORTHO05D008181 7.6e-67 259.2 366 65.6
AL7G29520 Arabidopsis lyrata HOM05D006572 ORTHO05D008181 2.9e-66 257.3 586 51.7
Thhalv10024706m.g Eutrema salsugineum HOM05D006572 ORTHO05D008181 1.2e-64 251.9 585 52.5
Sp7g21790 Schrenkiella parvula HOM05D006572 ORTHO05D008181 4.6e-64 250.0 590 51.5
THA.LOC104815028 Tarenaya hassleriana HOM05D006572 ORTHO05D008181 8.7e-63 245.7 592 44.9
Cfa021209 Carpinus fangiana HOM05D006572 ORTHO05D008181 6.3e-61 239.6 506 47.2
TPR.G3379 Trifolium pratense HOM05D006572 ORTHO05D008181 8.2e-61 239.2 595 42.4
Zm00001eb350650 Zea mays HOM05D006572 ORTHO05D008181 1.1e-60 238.8 580 44.7
Carub.0007s1729 Capsella rubella HOM05D006572 ORTHO05D008181 5.3e-60 236.5 589 48.0
CAN.G532.118 Capsicum annuum HOM05D006572 ORTHO05D008181 3.4e-59 233.8 512 43.6
SMO232G0056 Selaginella moellendorffii HOM05D006572 ORTHO05D008181 4.5e-59 233.4 519 47.6
Ca_17483_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 1.4e-57 228.4 614 34.9
Ca_17508_v3 Cicer arietinum L. HOM05D006572 ORTHO05D008181 1.4e-57 228.4 614 34.9
Aa31LG6G7050 Aethionema arabicum HOM05D006572 ORTHO05D008181 6.1e-56 223.0 586 53.4
CsaV3_4G006550 Cucumis sativus L. HOM05D006572 ORTHO05D008181 2.4e-52 211.1 506 46.2
CDE03G0094 Ceratophyllum demersum HOM05D006572 ORTHO05D008181 1.6e-48 198.4 547 47.2
BcaNung04088 Brassica carinata HOM05D006572 ORTHO05D008181 1.1e-46 192.2 533 46.2
Pp3c22_12260 Physcomitrium patens HOM05D006572 ORTHO05D008181 1.5e-46 191.8 503 26.8
unitig_748.g8130 Utricularia gibba HOM05D006572 ORTHO05D008181 2.2e-34 151.4 335 56.4
FAN13G1782 Fragaria x ananassa HOM05D006572 ORTHO05D008181 2.6e-30 137.9 323 41.8
unitig_748.g8129 Utricularia gibba HOM05D006572 ORTHO05D008181 2.5e-25 121.3 158 43.7
TAR376G0673 Trochodendron aralioides HOM05D006572 ORTHO05D008181 1.7e-21 108.6 121 53.7
Dinv37534 Davidia involucrata HOM05D006572 ORTHO05D008181 1.6e-19 102.1 222 43.2
TAR629G3536 Trochodendron aralioides HOM05D006572 ORTHO05D008181 9.8e-14 82.8 205 56.6
Hma1.2p1_0450F.1_g155520 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 9.2e-12 76.3 175 32.0
Hma1.2p1_1530F.1_g289190 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 1.5e-09 68.9 195 29.2
QL12p023582 Quercus lobata HOM05D006572 ORTHO05D008181 5.6e-09 67.0 58 56.9
QL93p2003_0058 Quercus lobata HOM05D006572 ORTHO05D008181 1.6e-08 65.5 58 55.2
CBR_g39933 Chara braunii HOM05D006572 ORTHO05D008181 1.2e-06 59.3 90 37.8
Hma1.2p1_0082F.1_g042550 Hydrangea macrophylla HOM05D006572 ORTHO05D008181 9.8e-06 56.2 39 69.2


User provided reference genes

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