Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund11327 Selenicereus undatus HOM05D006859 ORTHO05D007990 3.8e-158 561.6 312 100.0
EL10Ac5g12291 Beta vulgaris HOM05D006859 ORTHO05D007990 5.5e-101 371.7 321 67.3
Dinv28858 Davidia involucrata HOM05D006859 ORTHO05D007990 1.3e-94 350.5 306 65.4
Prupe.5G059200 Prunus persica HOM05D006859 ORTHO05D007990 6.8e-91 338.2 315 61.0
FvH4_5g20140 Fragaria vesca HOM05D006859 ORTHO05D007990 6.3e-89 331.6 300 62.0
QL12p009356 Quercus lobata HOM05D006859 ORTHO05D007990 5.4e-88 328.6 330 58.2
FAN18G2706 Fragaria x ananassa HOM05D006859 ORTHO05D007990 1.7e-86 323.6 301 61.1
CSS0046225 Camellia sinensis var. sinensis HOM05D006859 ORTHO05D007990 2.9e-86 322.8 299 62.2
FAN08G0582 Fragaria x ananassa HOM05D006859 ORTHO05D007990 1.5e-85 320.5 303 61.7
MD00G1165000 Malus domestica HOM05D006859 ORTHO05D007990 7.2e-85 318.2 317 59.3
MD04G1050900 Malus domestica HOM05D006859 ORTHO05D007990 2.8e-84 316.2 300 62.0
RcHm_v2.0_Chr7g0205091 Rosa chinensis HOM05D006859 ORTHO05D007990 1.0e-83 314.3 312 58.0
vmacro00041 Vaccinium macrocarpon HOM05D006859 ORTHO05D007990 2.0e-82 310.1 299 61.5
Gorai.004G193900 Gossypium raimondii HOM05D006859 ORTHO05D007990 4.4e-82 308.9 289 60.9
TAR636G0545 Trochodendron aralioides HOM05D006859 ORTHO05D007990 4.4e-82 308.9 306 61.1
Actinidia25901 Actinidia chinensis HOM05D006859 ORTHO05D007990 5.7e-82 308.5 301 60.5
Gohir.D08G184600 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.7e-81 307.0 289 60.9
Eucgr.D02124 Eucalyptus grandis HOM05D006859 ORTHO05D007990 2.2e-81 306.6 318 56.3
Gohir.A08G165800 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.1e-80 304.3 289 60.6
FAN04G1798 Fragaria x ananassa HOM05D006859 ORTHO05D007990 1.8e-80 303.5 300 59.3
PGR031G1874 Punica granatum HOM05D006859 ORTHO05D007990 5.4e-80 302.0 293 61.8
Duzib205G1414 Durio zibethinus HOM05D006859 ORTHO05D007990 9.2e-80 301.2 310 56.8
Sabra03G0053000 Salix brachista HOM05D006859 ORTHO05D007990 1.0e-78 297.7 319 54.9
RhsimUnG0092900 Rhododendron simsii HOM05D006859 ORTHO05D007990 1.7e-78 297.0 306 59.5
Aqoxy7G00861 Aquilegia oxysepala HOM05D006859 ORTHO05D007990 3.8e-78 295.8 293 58.7
MELO3C003330.2 Cucumis melo HOM05D006859 ORTHO05D007990 8.6e-78 294.7 307 55.4
Medtr5g013280 Medicago truncatula HOM05D006859 ORTHO05D007990 2.5e-77 293.1 293 58.7
Potri.003G082200 Populus trichocarpa HOM05D006859 ORTHO05D007990 1.6e-76 290.4 318 54.4
TPR.G31422 Trifolium pratense HOM05D006859 ORTHO05D007990 1.6e-76 290.4 297 58.9
Duzib068G0861 Durio zibethinus HOM05D006859 ORTHO05D007990 2.8e-76 289.7 289 57.4
TWI15G0070 Tripterygium wilfordii HOM05D006859 ORTHO05D007990 1.0e-75 287.7 314 55.1
Atru.chr9.1231 Acer truncatum HOM05D006859 ORTHO05D007990 6.8e-75 285.0 320 54.7
Oeu017213.1 Olea europaea HOM05D006859 ORTHO05D007990 1.5e-74 283.9 292 57.2
CANSAT21G2559 Cannabis sativa HOM05D006859 ORTHO05D007990 7.5e-74 281.6 322 53.1
Lj2g0014108 Lotus japonicus HOM05D006859 ORTHO05D007990 7.5e-74 281.6 320 55.3
Manes.01G086700 Manihot esculenta HOM05D006859 ORTHO05D007990 1.8e-72 276.9 315 56.8
Cc08_g11510 Coffea canephora HOM05D006859 ORTHO05D007990 5.4e-72 275.4 310 52.6
CiPaw.11G069300 Carya illinoinensis HOM05D006859 ORTHO05D007990 9.2e-72 274.6 259 60.6
PSO675G5712 Papaver somniferum HOM05D006859 ORTHO05D007990 1.3e-70 270.8 312 53.5
Phvul.002G001000 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 1.3e-70 270.8 297 54.2
Lalb_Chr16g0379391 Lupinus albus HOM05D006859 ORTHO05D007990 3.0e-70 269.6 296 55.7
VMungo1215G2710 Vigna mungo HOM05D006859 ORTHO05D007990 5.0e-70 268.9 305 54.4
Migut.A01048 Erythranthe guttata HOM05D006859 ORTHO05D007990 6.6e-70 268.5 313 52.4
PGSC0003DMG400024153 Solanum tuberosum HOM05D006859 ORTHO05D007990 6.6e-70 268.5 321 52.6
Cpa.g.sc89.10 Carica papaya HOM05D006859 ORTHO05D007990 1.1e-69 267.7 315 53.0
PSO717G0098 Papaver somniferum HOM05D006859 ORTHO05D007990 5.6e-69 265.4 311 53.1
Nn1g00823 Nelumbo nucifera HOM05D006859 ORTHO05D007990 7.3e-69 265.0 298 56.7
Ciclev10021440m.g Citrus clementina HOM05D006859 ORTHO05D007990 1.8e-67 260.4 309 50.2
AUR62018861 Chenopodium quinoa HOM05D006859 ORTHO05D007990 8.9e-67 258.1 225 64.9
HanXRQChr06g0164541 Helianthus annuus HOM05D006859 ORTHO05D007990 5.8e-66 255.4 303 52.8
Actinidia02186 Actinidia chinensis HOM05D006859 ORTHO05D007990 9.8e-66 254.6 304 53.9
Sc01g0008110 Simmondsia chinensis HOM05D006859 ORTHO05D007990 2.2e-65 253.4 244 64.8
Glyma.01G205600 Glycine max HOM05D006859 ORTHO05D007990 4.9e-65 252.3 304 52.6
Nitab4.5_0000506g0100 Nicotiana tabacum HOM05D006859 ORTHO05D007990 3.2e-64 249.6 284 53.9
Sopen06g021040 Solanum pennellii HOM05D006859 ORTHO05D007990 4.1e-64 249.2 298 53.0
MBI04_g28364_MAGBIO Magnolia biondii HOM05D006859 ORTHO05D007990 1.2e-63 247.7 295 53.6
Psat2g176200 Pisum sativum HOM05D006859 ORTHO05D007990 1.2e-63 247.7 289 54.3
Nitab4.5_0003456g0040 Nicotiana tabacum HOM05D006859 ORTHO05D007990 4.6e-63 245.7 322 49.4
CsaV3_3G049860 Cucumis sativus L. HOM05D006859 ORTHO05D007990 7.8e-63 245.0 313 49.8
ECA236G3610 Erigeron canadensis HOM05D006859 ORTHO05D007990 3.3e-61 239.6 264 56.1
Lj2C227G12 Lonicera japonica HOM05D006859 ORTHO05D007990 6.2e-60 235.3 256 56.2
Cfa012667 Carpinus fangiana HOM05D006859 ORTHO05D007990 2.3e-59 233.4 287 53.3
arahy.Tifrunner.gnm1.ann1.B2NILF Arachis hypogaea HOM05D006859 ORTHO05D007990 5.8e-58 228.8 307 50.8
arahy.Tifrunner.gnm1.ann1.WYE05V Arachis hypogaea HOM05D006859 ORTHO05D007990 5.8e-58 228.8 307 50.8
Lsat_1_v5_gn_1_53480 Lactuca sativa HOM05D006859 ORTHO05D007990 1.1e-56 224.6 304 47.7
ATR0665G206 Amborella trichopoda HOM05D006859 ORTHO05D007990 1.4e-56 224.2 287 50.9
Sp7g16620 Schrenkiella parvula HOM05D006859 ORTHO05D007990 7.1e-56 221.9 291 48.1
Solyc06g060890.4 Solanum lycopersicum HOM05D006859 ORTHO05D007990 1.3e-54 217.6 254 51.2
Gohir.D03G167400 Gossypium hirsutum HOM05D006859 ORTHO05D007990 1.7e-54 217.2 256 48.4
BcaNung00082 Brassica carinata HOM05D006859 ORTHO05D007990 6.6e-54 215.3 289 48.4
CARHR224240 Cardamine hirsuta HOM05D006859 ORTHO05D007990 1.2e-52 211.1 292 47.9
DCAR_004596 Daucus carota HOM05D006859 ORTHO05D007990 1.2e-52 211.1 262 50.0
Thhalv10025654m.g Eutrema salsugineum HOM05D006859 ORTHO05D007990 2.8e-52 209.9 289 47.1
A01p09620 Brassica napus HOM05D006859 ORTHO05D007990 4.7e-52 209.1 309 46.3
BraA01t00904Z Brassica rapa HOM05D006859 ORTHO05D007990 8.1e-52 208.4 308 45.5
Gohir.A03G005200 Gossypium hirsutum HOM05D006859 ORTHO05D007990 2.3e-51 206.8 256 47.7
Thecc.03G243500 Theobroma cacao HOM05D006859 ORTHO05D007990 2.3e-51 206.8 246 55.3
AT4G17540 Arabidopsis thaliana HOM05D006859 ORTHO05D007990 3.1e-51 206.5 310 44.8
Gorai.003G177100 Gossypium raimondii HOM05D006859 ORTHO05D007990 3.1e-51 206.5 256 43.8
Carub.0007s2385 Capsella rubella HOM05D006859 ORTHO05D007990 5.2e-51 205.7 318 44.3
BcaC09g51632 Brassica carinata HOM05D006859 ORTHO05D007990 8.9e-51 204.9 308 45.8
AUR62007150 Chenopodium quinoa HOM05D006859 ORTHO05D007990 2.0e-50 203.8 217 54.8
ClCG09G012800 Citrullus lanatus HOM05D006859 ORTHO05D007990 1.3e-49 201.1 286 43.0
HPP92_014892 Vanilla planifolia HOM05D006859 ORTHO05D007990 1.3e-49 201.1 292 47.3
C01p11190 Brassica napus HOM05D006859 ORTHO05D007990 1.7e-49 200.7 291 47.1
BolC1t01085H Brassica oleracea HOM05D006859 ORTHO05D007990 2.2e-49 200.3 291 46.7
THA.LOC104798356 Tarenaya hassleriana HOM05D006859 ORTHO05D007990 6.0e-47 192.2 319 43.3
Ca_24604_v3 Cicer arietinum L. HOM05D006859 ORTHO05D007990 7.8e-47 191.8 296 42.6
Zm00001eb391020 Zea mays HOM05D006859 ORTHO05D007990 5.1e-46 189.1 288 46.5
Os10g0563400 Oryza sativa ssp. japonica HOM05D006859 ORTHO05D007990 1.1e-45 188.0 290 46.6
unitig_8.g3018 Utricularia gibba HOM05D000481 ORTHO05D007990 4.3e-45 186.0 280 48.9
Hma1.2p1_0840F.1_g226470 Hydrangea macrophylla HOM05D006859 ORTHO05D007990 1.4e-43 181.0 270 42.6
CAN.G62.4 Capsicum annuum HOM05D006859 ORTHO05D007990 5.8e-42 175.6 203 46.3
Sed0000052 Sechium edule HOM05D006859 ORTHO05D007990 1.3e-41 174.5 181 49.2
SalBow6G1554 Salvia bowleyana HOM05D006859 ORTHO05D007990 2.2e-41 173.7 262 50.8
Peaxi162Scf00190g00099 Petunia axillaris HOM05D006859 ORTHO05D007990 8.4e-41 171.8 214 46.3
Glyma.11G037300 Glycine max HOM05D006859 ORTHO05D007990 2.1e-39 167.2 233 42.9
CDE11G0841 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 4.6e-39 166.0 231 50.2
SGA_v2.0_scaffold199G41240 Striga asiatica HOM05D006859 ORTHO05D007990 3.9e-38 162.9 266 44.0
AL7G37080 Arabidopsis lyrata HOM05D006859 ORTHO05D007990 8.1e-36 155.2 250 42.4
Aa31LG6G280 Aethionema arabicum HOM05D006859 ORTHO05D007990 1.5e-34 151.0 255 42.0
Oeu040677.2 Olea europaea HOM05D006859 ORTHO05D007990 4.2e-32 142.9 191 41.4
GSVIVG01007347001 Vitis vinifera HOM05D006859 ORTHO05D007990 9.6e-29 131.7 79 83.5
AagrBONN_evm.TU.Sc2ySwM_228.2564 Anthoceros agrestis HOM05D006859 ORTHO05D007990 3.7e-28 129.8 306 33.3
Ah.07g199030 Amaranthus hybridus HOM05D006859 ORTHO05D007990 1.5e-26 124.4 92 80.4
DCAR_008336 Daucus carota HOM05D002294 ORTHO05D002367 5.5e-24 115.9 263 31.2
Pp3c27_6080 Physcomitrium patens HOM05D006859 ORTHO05D007990 6.5e-17 92.4 289 32.9
Mapoly0075s0082 Marchantia polymorpha HOM05D006859 ORTHO05D007990 4.2e-16 89.7 114 56.1
Glyma.11G037400 Glycine max HOM05D006859 ORTHO05D007990 9.3e-16 88.6 275 32.0
VMungo1215G2895 Vigna mungo HOM05D006859 ORTHO05D007990 2.7e-15 87.0 233 30.9
Phvul.002G001100 Phaseolus vulgaris HOM05D006859 ORTHO05D007990 4.6e-15 86.3 252 31.7
GSVIVG01007348001 Vitis vinifera HOM05D006859 ORTHO05D007990 1.9e-13 80.9 123 38.2
PSO717G0090 Papaver somniferum HOM05D006859 ORTHO05D007990 2.5e-13 80.5 259 33.2
CBR_g52283 Chara braunii HOM05D006859 ORTHO05D007990 2.8e-12 77.0 315 32.1
CDE11G0285 Ceratophyllum demersum HOM05D006859 ORTHO05D007990 1.1e-11 75.1 92 54.3
COL.COLO4_21682 Corchorus olitorius HOM05D006859 ORTHO05D007990 6.9e-11 72.4 153 34.6
Glyma.01G205500 Glycine max HOM05D006859 ORTHO05D007990 3.4e-10 70.1 231 31.6
HPP92_014890 Vanilla planifolia HOM05D006859 ORTHO05D007990 3.8e-09 66.6 70 50.0
SMO144G0205 Selaginella moellendorffii HOM05D003289 ORTHO05D004594 1.9e-08 64.3 321 27.7


User provided reference genes

Program Settings