Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund11307 Selenicereus undatus HOM05D006103 ORTHO05D007468 5.2e-132 474.6 267 100.0
EL10Ac5g12236 Beta vulgaris HOM05D006103 ORTHO05D007468 1.8e-92 343.2 257 80.2
AUR62007192 Chenopodium quinoa HOM05D006103 ORTHO05D007468 8.9e-92 340.9 262 69.1
QL12p008443 Quercus lobata HOM05D006103 ORTHO05D007468 3.9e-87 325.5 266 69.9
Dinv25153 Davidia involucrata HOM05D006103 ORTHO05D007468 3.3e-86 322.4 260 71.9
TAR375G0262 Trochodendron aralioides HOM05D006103 ORTHO05D007468 1.2e-85 320.5 262 71.8
Haze_08348 Corylus avellana HOM05D006103 ORTHO05D007468 1.6e-85 320.1 278 67.6
CANSAT21G0053 Cannabis sativa HOM05D006103 ORTHO05D007468 6.8e-84 314.7 262 69.8
Cc08_g11160 Coffea canephora HOM05D006103 ORTHO05D007468 6.8e-84 314.7 269 68.8
Prupe.5G053300 Prunus persica HOM05D006103 ORTHO05D007468 3.4e-83 312.4 273 68.1
Actinidia03414 Actinidia chinensis HOM05D006103 ORTHO05D007468 5.8e-83 311.6 264 68.9
CiPaw.11G084400 Carya illinoinensis HOM05D006103 ORTHO05D007468 3.8e-82 308.9 279 64.2
Atru.chr9.1156 Acer truncatum HOM05D006103 ORTHO05D007468 6.4e-82 308.1 262 68.3
CSS0016826 Camellia sinensis var. sinensis HOM05D006103 ORTHO05D007468 1.9e-81 306.6 269 66.2
Potri.001G149800 Populus trichocarpa HOM05D006103 ORTHO05D007468 2.4e-81 306.2 261 65.1
Duzib205G0801 Durio zibethinus HOM05D006103 ORTHO05D007468 1.2e-80 303.9 262 69.8
Sabra01G0119800 Salix brachista HOM05D006103 ORTHO05D007468 2.7e-80 302.8 260 67.7
PGR042G3635 Punica granatum HOM05D006103 ORTHO05D007468 4.6e-80 302.0 269 66.2
Eucgr.E00334 Eucalyptus grandis HOM05D006103 ORTHO05D007468 7.8e-80 301.2 298 58.1
CSS0027189 Camellia sinensis var. sinensis HOM05D006103 ORTHO05D007468 3.0e-79 299.3 265 67.5
ClCG10G002100 Citrullus lanatus HOM05D006103 ORTHO05D007468 3.9e-79 298.9 275 66.5
FAN18G2558 Fragaria x ananassa HOM05D006103 ORTHO05D007468 3.9e-79 298.9 276 65.2
Lsat_1_v5_gn_6_94780 Lactuca sativa HOM05D006103 ORTHO05D007468 6.6e-79 298.1 264 67.0
PSO063G5173 Papaver somniferum HOM05D006103 ORTHO05D007468 1.1e-78 297.4 268 64.2
RcHm_v2.0_Chr7g0206421 Rosa chinensis HOM05D006103 ORTHO05D007468 1.1e-78 297.4 278 64.7
Oeu054287.1 Olea europaea HOM05D006103 ORTHO05D007468 1.5e-78 297.0 271 65.7
Gorai.004G191100 Gossypium raimondii HOM05D006103 ORTHO05D007468 1.9e-78 296.6 262 67.2
MBI04_g46823_MAGBIO Magnolia biondii HOM05D006103 ORTHO05D007468 1.9e-78 296.6 262 68.7
Gohir.D08G182200 Gossypium hirsutum HOM05D006103 ORTHO05D007468 2.5e-78 296.2 262 67.2
Aqoxy3G02600 Aquilegia oxysepala HOM05D006103 ORTHO05D007468 3.3e-78 295.8 265 66.0
Thecc.03G237900 Theobroma cacao HOM05D006103 ORTHO05D007468 4.3e-78 295.4 270 67.4
FvH4_5g20690 Fragaria vesca HOM05D006103 ORTHO05D007468 5.6e-78 295.0 275 65.1
FAN08G0488 Fragaria x ananassa HOM05D006103 ORTHO05D007468 7.3e-78 294.7 269 66.5
MSTRG.13771 Avicennia marina HOM05D006103 ORTHO05D007468 9.6e-78 294.3 260 63.5
FAN04G1103 Fragaria x ananassa HOM05D006103 ORTHO05D007468 1.6e-77 293.5 267 65.9
CAN.G422.12 Capsicum annuum HOM05D006103 ORTHO05D007468 2.1e-77 293.1 267 67.8
MD04G1054200 Malus domestica HOM05D006103 ORTHO05D007468 2.8e-77 292.7 288 61.8
arahy.Tifrunner.gnm1.ann1.GKQN4T Arachis hypogaea HOM05D006103 ORTHO05D007468 3.6e-77 292.4 267 64.4
Lj8A286T53 Lonicera japonica HOM05D006103 ORTHO05D007468 3.6e-77 292.4 267 62.9
Sed0003222 Sechium edule HOM05D006103 ORTHO05D007468 4.8e-77 292.0 276 65.6
FAN13G0941 Fragaria x ananassa HOM05D006103 ORTHO05D007468 1.4e-76 290.4 273 63.7
Glyma.05G067000 Glycine max HOM05D006103 ORTHO05D007468 3.1e-76 289.3 268 64.9
Sp2g11900 Schrenkiella parvula HOM05D006103 ORTHO05D007468 4.0e-76 288.9 263 66.2
BraA02t08094Z Brassica rapa HOM05D006103 ORTHO05D007468 5.3e-76 288.5 262 65.3
CsaV3_3G002190 Cucumis sativus L. HOM05D006103 ORTHO05D007468 5.3e-76 288.5 283 63.6
AL8G11110 Arabidopsis lyrata HOM05D006103 ORTHO05D007468 6.9e-76 288.1 264 64.0
Solyc06g060990.4 Solanum lycopersicum HOM05D006103 ORTHO05D007468 9.0e-76 287.7 272 66.2
Gohir.A08G162200 Gossypium hirsutum HOM05D006103 ORTHO05D007468 1.2e-75 287.3 262 66.0
C02p48360 Brassica napus HOM05D006103 ORTHO05D007468 1.5e-75 287.0 262 63.7
BolC2t10867H Brassica oleracea HOM05D006103 ORTHO05D007468 1.5e-75 287.0 262 63.7
Carub.0008s0066 Capsella rubella HOM05D006103 ORTHO05D007468 1.5e-75 287.0 263 66.2
A02p30800 Brassica napus HOM05D006103 ORTHO05D007468 2.6e-75 286.2 262 64.9
MELO3C013891.2 Cucumis melo HOM05D006103 ORTHO05D007468 2.6e-75 286.2 292 61.0
Sopen06g021130 Solanum pennellii HOM05D006103 ORTHO05D007468 2.6e-75 286.2 271 66.1
VMungo0251G0880 Vigna mungo HOM05D006103 ORTHO05D007468 2.6e-75 286.2 269 64.3
Lj8C280G0 Lonicera japonica HOM05D006103 ORTHO05D007468 3.4e-75 285.8 260 57.3
Lalb_Chr16g0386381 Lupinus albus HOM05D006103 ORTHO05D007468 4.4e-75 285.4 263 66.5
BcaC03g16934 Brassica carinata HOM05D006103 ORTHO05D007468 5.8e-75 285.0 262 63.4
Rhsim04G0176100 Rhododendron simsii HOM05D006103 ORTHO05D007468 5.8e-75 285.0 262 63.7
Thhalv10000969m.g Eutrema salsugineum HOM05D006103 ORTHO05D007468 9.9e-75 284.3 262 63.0
Peaxi162Scf00190g00616 Petunia axillaris HOM05D006103 ORTHO05D007468 9.9e-75 284.3 270 66.3
Ciclev10021261m.g Citrus clementina HOM05D006103 ORTHO05D007468 1.7e-74 283.5 262 63.4
SGA_v2.0_scaffold20G09256 Striga asiatica HOM05D006103 ORTHO05D007468 2.2e-74 283.1 260 62.7
Phvul.003G226000 Phaseolus vulgaris HOM05D006103 ORTHO05D007468 3.8e-74 282.3 272 62.9
Manes.17G024600 Manihot esculenta HOM05D006103 ORTHO05D007468 4.9e-74 282.0 261 64.0
C02p28550 Brassica napus HOM05D006103 ORTHO05D007468 6.4e-74 281.6 262 61.8
BolC2t08897H Brassica oleracea HOM05D006103 ORTHO05D007468 6.4e-74 281.6 262 61.8
PGSC0003DMG400026583 Solanum tuberosum HOM05D006103 ORTHO05D007468 8.4e-74 281.2 278 65.1
AT5G47090 Arabidopsis thaliana HOM05D006103 ORTHO05D007468 1.1e-73 280.8 262 63.7
CARHR174300 Cardamine hirsuta HOM05D006103 ORTHO05D007468 1.1e-73 280.8 262 56.5
Nitab4.5_0000506g0180 Nicotiana tabacum HOM05D006103 ORTHO05D007468 4.2e-73 278.9 272 64.7
TWI60G1123 Tripterygium wilfordii HOM05D006103 ORTHO05D007468 4.2e-73 278.9 265 61.1
BcaC03g15262 Brassica carinata HOM05D006103 ORTHO05D007468 5.4e-73 278.5 262 61.1
HanXRQChr03g0089621 Helianthus annuus HOM05D006103 ORTHO05D007468 2.7e-72 276.2 260 61.5
ECA240G1687 Erigeron canadensis HOM05D005140 ORTHO05D006288 7.9e-72 274.6 265 57.4
CDE11G0859 Ceratophyllum demersum HOM05D006103 ORTHO05D007468 1.7e-71 273.5 262 58.4
DCAR_004514 Daucus carota HOM05D006103 ORTHO05D007468 6.6e-71 271.6 274 60.6
unitig_699.g19773 Utricularia gibba HOM05D006103 ORTHO05D007468 6.6e-71 271.6 283 60.4
Cpa.g.sc98.70 Carica papaya HOM05D006103 ORTHO05D007468 8.7e-71 271.2 266 54.1
CDE02G1890 Ceratophyllum demersum HOM05D006103 ORTHO05D007468 4.3e-70 268.9 262 59.9
Aa31LG9G5870 Aethionema arabicum HOM05D006103 ORTHO05D007468 1.3e-69 267.3 285 60.0
Medtr4g099190 Medicago truncatula HOM05D006103 ORTHO05D007468 3.6e-69 265.8 269 57.6
Zm00001eb377550 Zea mays HOM05D006103 ORTHO05D007468 3.6e-69 265.8 271 58.3
Migut.E01036 Erythranthe guttata HOM05D006103 ORTHO05D007468 1.1e-68 264.2 260 59.6
Migut.E01310 Erythranthe guttata HOM05D006103 ORTHO05D007468 1.1e-68 264.2 260 59.6
Lj4g0004061 Lotus japonicus HOM05D006103 ORTHO05D007468 1.8e-68 263.5 278 59.0
Ca_22022_v3 Cicer arietinum L. HOM05D006103 ORTHO05D007468 1.2e-67 260.8 262 58.4
AUR62018811 Chenopodium quinoa HOM05D006103 ORTHO05D007468 1.5e-67 260.4 206 68.0
vmacro00388 Vaccinium macrocarpon HOM05D006103 ORTHO05D007468 4.5e-67 258.8 346 45.1
Os06g0139700 Oryza sativa ssp. japonica HOM05D006103 ORTHO05D007468 3.2e-65 252.7 265 61.1
Sc22g0001160 Simmondsia chinensis HOM05D006103 ORTHO05D007468 3.2e-65 252.7 185 81.6
Nitab4.5_0013289g0030 Nicotiana tabacum HOM05D006103 ORTHO05D007468 1.6e-64 250.4 238 64.3
SHI07660 Sapria himalayana HOM05D006103 ORTHO05D007468 6.7e-63 245.0 264 57.6
ATR0665G401 Amborella trichopoda HOM05D006103 ORTHO05D007468 1.5e-62 243.8 264 59.5
SEGI_16450 Sequoiadendron giganteum HOM05D006103 ORTHO05D007468 1.5e-62 243.8 261 55.6
Dinv28889 Davidia involucrata HOM05D006103 ORTHO05D007468 5.3e-60 235.3 138 81.2
GSVIVG01013285001 Vitis vinifera HOM05D006103 ORTHO05D007468 1.0e-58 231.1 138 77.5
CANSAT21G0160 Cannabis sativa HOM05D001479 ORTHO05D007468 2.2e-58 229.9 143 76.9
CANSAT21G1035 Cannabis sativa HOM05D006103 ORTHO05D007468 8.4e-58 228.0 142 76.8
Hma1.2p1_1672F.1_g296810 Hydrangea macrophylla HOM05D006103 ORTHO05D007468 2.1e-56 223.4 220 61.4
BcaC07g39778 Brassica carinata HOM05D006103 ORTHO05D007468 1.3e-55 220.7 262 54.6
Psat4g074520 Pisum sativum HOM05D006103 ORTHO05D007468 1.5e-51 207.2 262 47.3
Pp3c16_2730 Physcomitrium patens HOM05D006103 ORTHO05D007468 1.5e-46 190.7 277 46.2
TPR.G25737 Trifolium pratense HOM05D006103 ORTHO05D007468 1.9e-46 190.3 283 41.7
HPP92_014398 Vanilla planifolia HOM05D006103 ORTHO05D007468 2.2e-45 186.8 143 60.8
SMO171G0121 Selaginella moellendorffii HOM05D006103 ORTHO05D007468 2.5e-38 163.3 262 43.1
AagrBONN_evm.TU.Sc2ySwM_368.2081 Anthoceros agrestis HOM05D006103 ORTHO05D007468 1.7e-37 160.6 261 41.4
BolC8t50609H Brassica oleracea HOM05D006103 ORTHO05D007468 4.8e-37 159.1 110 67.3
AL8G11000 Arabidopsis lyrata HOM05D006103 ORTHO05D007468 1.8e-31 140.6 158 62.0
C08p30000 Brassica napus HOM05D006103 ORTHO05D007468 2.0e-30 137.1 89 69.7
CBR_g49667 Chara braunii HOM05D006103 ORTHO05D007468 1.7e-29 134.0 360 34.7
Lj8A284T15 Lonicera japonica HOM05D006103 ORTHO05D007468 1.1e-28 131.3 87 72.4
Actinidia02205 Actinidia chinensis HOM05D006103 ORTHO05D007468 9.4e-25 118.2 78 74.4
Cfa012348 Carpinus fangiana HOM05D006103 ORTHO05D007468 4.8e-21 105.9 83 65.1
Lj8A284T12 Lonicera japonica HOM05D006103 ORTHO05D007468 5.3e-20 102.4 141 46.1
RcHm_v2.0_Chr4g0446321 Rosa chinensis HOM05D006103 ORTHO05D007468 7.7e-19 98.6 191 35.1
COL.COLO4_06694 Corchorus olitorius HOM05D006103 ORTHO05D007468 2.5e-17 93.6 88 59.1
SHI06574 Sapria himalayana HOM05D006103 ORTHO05D007468 1.2e-16 91.3 150 37.3
MCO11G792 Micromonas commoda HOM05D006103 ORTHO05D007468 2.1e-16 90.5 298 28.5
SHI06573 Sapria himalayana HOM05D006103 ORTHO05D007468 1.0e-15 88.2 74 58.1
Lj8C284T4 Lonicera japonica HOM05D006103 ORTHO05D007468 8.8e-15 85.1 55 63.6
RcHm_v2.0_Chr6g0308851 Rosa chinensis HOM05D006103 ORTHO05D007468 3.4e-14 83.2 54 72.2
Carub.0008s0069 Capsella rubella HOM05D006103 ORTHO05D007468 5.9e-11 72.4 96 46.9
CARHR174410 Cardamine hirsuta HOM05D006103 ORTHO05D007468 8.5e-10 68.6 50 62.0
Cre03.g170100 Chlamydomonas reinhardtii HOM05D006103 ORTHO05D007468 2.5e-09 67.0 94 40.4
Lj8A280T20 Lonicera japonica HOM05D006103 ORTHO05D007468 2.1e-08 63.9 48 70.8


User provided reference genes

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