Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund11210 Selenicereus undatus HOM05D007450 ORTHO05D009377 4.0e-54 214.5 111 100.0
AUR62018673 Chenopodium quinoa HOM05D007450 ORTHO05D009377 8.7e-25 117.1 87 71.3
EL10Ac5g12043 Beta vulgaris HOM05D007450 ORTHO05D009377 1.5e-24 116.3 99 67.7
Rhsim07G0130700 Rhododendron simsii HOM05D007450 ORTHO05D009377 7.9e-18 94.0 75 65.3
Sc01g0007300 Simmondsia chinensis HOM05D007450 ORTHO05D009377 3.9e-17 91.7 102 52.9
Actinidia09178 Actinidia chinensis HOM05D007450 ORTHO05D009377 1.1e-16 90.1 70 67.1
Cc08_g03220 Coffea canephora HOM05D007450 ORTHO05D009377 3.3e-16 88.6 90 56.7
DCAR_008242 Daucus carota HOM05D007450 ORTHO05D009377 5.7e-16 87.8 67 68.7
Actinidia14787 Actinidia chinensis HOM05D007450 ORTHO05D009377 7.4e-16 87.4 70 67.1
Dinv25243 Davidia involucrata HOM05D007450 ORTHO05D009377 7.4e-16 87.4 70 65.7
Gohir.D12G209400 Gossypium hirsutum HOM05D007450 ORTHO05D009377 9.7e-16 87.0 82 58.5
Dinv28985 Davidia involucrata HOM05D007450 ORTHO05D009377 2.8e-15 85.5 68 64.7
Gohir.A12G207000 Gossypium hirsutum HOM05D007450 ORTHO05D009377 4.8e-15 84.7 105 53.3
Manes.14G162800 Manihot esculenta HOM05D007450 ORTHO05D009377 6.3e-15 84.3 88 55.7
Atru.chr6.1639 Acer truncatum HOM05D007450 ORTHO05D009377 8.2e-15 84.0 61 68.9
FvH4_5g22750 Fragaria vesca HOM05D007450 ORTHO05D009377 8.2e-15 84.0 88 56.8
FAN18G1197 Fragaria x ananassa HOM05D007450 ORTHO05D009377 8.2e-15 84.0 88 56.8
FAN18G1518 Fragaria x ananassa HOM05D007450 ORTHO05D009377 8.2e-15 84.0 88 56.8
vmacro14189 Vaccinium macrocarpon HOM05D007450 ORTHO05D009377 8.2e-15 84.0 69 63.8
FAN08G0787 Fragaria x ananassa HOM05D007450 ORTHO05D009377 1.8e-14 82.8 88 55.7
Potri.001G138700 Populus trichocarpa HOM05D007450 ORTHO05D009377 1.8e-14 82.8 108 48.1
Potri.003G095100 Populus trichocarpa HOM05D007450 ORTHO05D009377 1.8e-14 82.8 61 67.2
RcHm_v2.0_Chr7g0211351 Rosa chinensis HOM05D007450 ORTHO05D009377 1.8e-14 82.8 88 55.7
FAN04G2147 Fragaria x ananassa HOM05D007450 ORTHO05D009377 2.4e-14 82.4 88 55.7
Sed0022287 Sechium edule HOM05D007450 ORTHO05D009377 2.4e-14 82.4 76 53.9
Lsat_1_v5_gn_6_1640 Lactuca sativa HOM05D007450 ORTHO05D009377 3.1e-14 82.0 61 65.6
Gorai.008G225000 Gossypium raimondii HOM05D007450 ORTHO05D009377 6.9e-14 80.9 65 66.2
Sabra01G0107700 Salix brachista HOM05D007450 ORTHO05D009377 6.9e-14 80.9 87 55.2
Sopen08g025140 Solanum pennellii HOM05D007450 ORTHO05D009377 6.9e-14 80.9 77 61.0
PGSC0003DMG400014800 Solanum tuberosum HOM05D007450 ORTHO05D009377 6.9e-14 80.9 77 59.7
Thecc.03G307400 Theobroma cacao HOM05D007450 ORTHO05D009377 6.9e-14 80.9 88 56.8
C05p38880 Brassica napus HOM05D007450 ORTHO05D009377 9.0e-14 80.5 74 55.4
BolC5t32629H Brassica oleracea HOM05D007450 ORTHO05D009377 9.0e-14 80.5 74 55.4
FAN13G0277 Fragaria x ananassa HOM05D007450 ORTHO05D009377 9.0e-14 80.5 87 55.2
FAN13G1033 Fragaria x ananassa HOM05D007450 ORTHO05D009377 9.0e-14 80.5 87 55.2
Nitab4.5_0000685g0040 Nicotiana tabacum HOM05D007450 ORTHO05D009377 1.2e-13 80.1 99 51.5
CANSAT21G1074 Cannabis sativa HOM05D007450 ORTHO05D009377 1.5e-13 79.7 72 58.3
Duzib205G1651 Durio zibethinus HOM05D007450 ORTHO05D009377 1.5e-13 79.7 90 54.4
MD06G1038000 Malus domestica HOM05D007450 ORTHO05D009377 1.5e-13 79.7 77 55.8
Peaxi162Scf00170g01010 Petunia axillaris HOM05D007450 ORTHO05D009377 2.0e-13 79.3 60 65.0
MSTRG.1994 Avicennia marina HOM05D007450 ORTHO05D009377 2.6e-13 79.0 52 75.0
CSS0005314 Camellia sinensis var. sinensis HOM05D007450 ORTHO05D009377 2.6e-13 79.0 69 60.9
Ciclev10018330m.g Citrus clementina HOM05D007450 ORTHO05D009377 2.6e-13 79.0 86 57.0
Nitab4.5_0000353g0070 Nicotiana tabacum HOM05D007450 ORTHO05D009377 2.6e-13 79.0 93 54.8
GSVIVG01013568001 Vitis vinifera HOM05D007450 ORTHO05D009377 3.4e-13 78.6 61 67.2
BcaC05g27880 Brassica carinata HOM05D007450 ORTHO05D009377 7.6e-13 77.4 74 55.4
Carub.0001s3064 Capsella rubella HOM05D007450 ORTHO05D009377 7.6e-13 77.4 64 62.5
Cfa012487 Carpinus fangiana HOM05D007450 ORTHO05D009377 7.6e-13 77.4 70 60.0
ECA233G1068 Erigeron canadensis HOM05D007450 ORTHO05D009377 7.6e-13 77.4 74 59.5
CAN.G298.58 Capsicum annuum HOM05D007450 ORTHO05D009377 1.0e-12 77.0 93 53.8
Solyc08g076580.3 Solanum lycopersicum HOM05D007450 ORTHO05D009377 1.0e-12 77.0 93 53.8
THA.LOC104798592 Tarenaya hassleriana HOM05D007450 ORTHO05D009377 1.0e-12 77.0 65 58.5
TAR629G3037 Trochodendron aralioides HOM05D007450 ORTHO05D009377 1.0e-12 77.0 70 58.6
MELO3C003430.2 Cucumis melo HOM05D007450 ORTHO05D009377 1.3e-12 76.6 89 51.7
Prupe.5G030900 Prunus persica HOM05D007450 ORTHO05D009377 1.3e-12 76.6 99 51.5
AT1G32310 Arabidopsis thaliana HOM05D007450 ORTHO05D009377 1.7e-12 76.3 64 60.9
ClCG09G011730 Citrullus lanatus HOM05D007450 ORTHO05D009377 1.7e-12 76.3 67 58.2
Medtr5g029660 Medicago truncatula HOM05D007450 ORTHO05D009377 1.7e-12 76.3 105 46.7
Thhalv10009436m.g Eutrema salsugineum HOM05D007450 ORTHO05D009377 2.2e-12 75.9 64 59.4
PGR031G1038 Punica granatum HOM05D007450 ORTHO05D009377 2.2e-12 75.9 96 45.8
BraA05t21386Z Brassica rapa HOM05D007450 ORTHO05D009377 2.9e-12 75.5 71 57.7
CARHR031660 Cardamine hirsuta HOM05D007450 ORTHO05D009377 3.8e-12 75.1 64 59.4
Peaxi162Scf00170g00915 Petunia axillaris HOM05D007450 ORTHO05D009377 3.8e-12 75.1 93 50.5
arahy.Tifrunner.gnm1.ann1.UE78BX Arachis hypogaea HOM05D007450 ORTHO05D009377 6.5e-12 74.3 71 53.5
arahy.Tifrunner.gnm1.ann1.XXZI65 Arachis hypogaea HOM05D007450 ORTHO05D009377 6.5e-12 74.3 71 53.5
Eucgr.E00251 Eucalyptus grandis HOM05D007450 ORTHO05D009377 6.5e-12 74.3 90 51.1
THA.LOC104808475 Tarenaya hassleriana HOM05D007450 ORTHO05D009377 6.5e-12 74.3 69 55.1
Peaxi162Scf00879g00221 Petunia axillaris HOM05D007450 ORTHO05D009377 8.5e-12 73.9 93 50.5
HanXRQChr13g0395471 Helianthus annuus HOM05D007450 ORTHO05D009377 1.1e-11 73.6 66 56.1
CiPaw.11G096800 Carya illinoinensis HOM05D007450 ORTHO05D009377 1.4e-11 73.2 102 48.0
Migut.E00781 Erythranthe guttata HOM05D007450 ORTHO05D009377 1.4e-11 73.2 51 70.6
A05p25040 Brassica napus HOM05D007450 ORTHO05D009377 2.5e-11 72.4 64 59.4
Lalb_Chr05g0215841 Lupinus albus HOM05D007450 ORTHO05D009377 2.5e-11 72.4 69 53.6
SalBow1G6923 Salvia bowleyana HOM05D007450 ORTHO05D009377 2.5e-11 72.4 110 41.8
Sp1g27980 Schrenkiella parvula HOM05D007450 ORTHO05D009377 2.5e-11 72.4 64 59.4
Aa31LG2G13720 Aethionema arabicum HOM05D007450 ORTHO05D009377 3.2e-11 72.0 61 57.4
Glyma.01G015700 Glycine max HOM05D007450 ORTHO05D009377 4.2e-11 71.6 62 59.7
Aqoxy3G02217 Aquilegia oxysepala HOM05D007450 ORTHO05D009377 5.5e-11 71.2 67 56.7
SHI36446 Sapria himalayana HOM05D007450 ORTHO05D009377 5.5e-11 71.2 57 63.2
HPP92_001521 Vanilla planifolia HOM05D007450 ORTHO05D009377 5.5e-11 71.2 89 48.3
Psat2g138000 Pisum sativum HOM05D007450 ORTHO05D009377 7.2e-11 70.9 90 50.0
BcaB03g13745 Brassica carinata HOM05D007450 ORTHO05D009377 9.4e-11 70.5 64 57.8
Ca_08150_v3 Cicer arietinum L. HOM05D007450 ORTHO05D009377 2.1e-10 69.3 68 54.4
Glyma.09G206700 Glycine max HOM05D007450 ORTHO05D009377 2.1e-10 69.3 62 58.1
QL12p004405 Quercus lobata HOM05D007450 ORTHO05D009377 2.7e-10 68.9 84 51.2
TPR.G8094 Trifolium pratense HOM05D007450 ORTHO05D009377 2.7e-10 68.9 82 47.6
Sed0003049 Sechium edule HOM05D007450 ORTHO05D009377 3.6e-10 68.6 69 50.7
Zm00001eb024740 Zea mays HOM05D007450 ORTHO05D009377 1.8e-09 66.2 57 54.4
VMungo1215G2816 Vigna mungo HOM05D007450 ORTHO05D009377 2.3e-09 65.9 59 59.3
Lj2g0017142 Lotus japonicus HOM05D007450 ORTHO05D009377 3.0e-09 65.5 90 47.8
PSO063G4138 Papaver somniferum HOM05D007450 ORTHO05D009377 6.7e-09 64.3 94 47.9
Os10g0575950 Oryza sativa ssp. japonica HOM05D007450 ORTHO05D009377 8.8e-09 63.9 51 58.8
PSO782G2764 Papaver somniferum HOM05D007450 ORTHO05D009377 1.9e-08 62.8 94 46.8
ATR0829G039 Amborella trichopoda HOM05D007450 ORTHO05D009377 2.5e-08 62.4 50 64.0
CsaV3_3G048930 Cucumis sativus L. HOM05D007450 ORTHO05D009377 3.3e-08 62.0 47 66.0
CDE11G0326 Ceratophyllum demersum HOM05D007450 ORTHO05D009377 5.7e-08 61.2 73 52.1
Lalb_Chr16g0381181 Lupinus albus HOM05D007450 ORTHO05D009377 5.7e-08 61.2 87 49.4
Haze_08178 Corylus avellana HOM05D007450 ORTHO05D009377 7.4e-08 60.8 48 66.7
COL.COLO4_16968 Corchorus olitorius HOM05D007450 ORTHO05D009377 1.8e-06 56.2 33 78.8
CARHR033090 Cardamine hirsuta HOM05D007450 ORTHO05D009377 2.4e-06 55.8 42 61.9


User provided reference genes

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