Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund11181 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.8e-213 745.0 364 100.0
Hund28272 Selenicereus undatus HOM05D004473 ORTHO05D005652 4.5e-171 604.7 475 68.4
Hund29659 Selenicereus undatus HOM05D004473 ORTHO05D005652 5.5e-169 597.8 504 64.9
Hund30056 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.0e-167 593.6 496 65.7
Hund29400 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.0e-167 592.0 496 65.5
Hund27810 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.3e-159 565.8 510 62.4
Hund30352 Selenicereus undatus HOM05D004473 ORTHO05D005652 5.9e-155 551.2 509 60.9
Hund10282 Selenicereus undatus HOM05D004473 ORTHO05D005652 6.1e-152 541.2 485 62.7
Hund29405 Selenicereus undatus HOM05D004473 ORTHO05D005652 4.5e-147 525.0 490 61.4
Hund29000 Selenicereus undatus HOM05D004473 ORTHO05D005652 7.8e-147 524.2 500 60.4
Hund29926 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.1e-145 520.4 500 60.2
EL10As2g23210 Beta vulgaris HOM05D004473 ORTHO05D005652 1.3e-130 470.3 501 53.9
Hma1.2p1_4210F.1_g338470 Hydrangea macrophylla HOM05D004473 ORTHO05D005652 3.3e-121 439.1 507 50.9
ScUNg0001290 Simmondsia chinensis HOM05D004473 ORTHO05D005652 4.4e-118 428.7 502 51.2
Hund25918 Selenicereus undatus HOM05D004473 ORTHO05D005652 6.2e-112 408.3 392 59.4
RcHm_v2.0_CPg0502521 Rosa chinensis HOM05D004473 ORTHO05D005652 6.0e-107 391.7 506 46.6
DCAR_032465 Daucus carota HOM05D004473 ORTHO05D005652 2.5e-105 386.3 509 47.7
Lj2P1239T154 Lonicera japonica HOM05D004473 ORTHO05D005652 1.3e-104 384.0 505 47.5
Sopen01g008040 Solanum pennellii HOM05D004473 ORTHO05D005652 1.5e-102 377.1 510 47.1
Potri.013G138201 Populus trichocarpa HOM05D004473 ORTHO05D005652 1.1e-100 370.9 509 46.2
Atru.chr6.757 Acer truncatum HOM05D004473 ORTHO05D005652 9.3e-100 367.9 505 45.1
HanXRQChr00c0368g0574161 Helianthus annuus HOM05D004473 ORTHO05D005652 4.6e-99 365.5 506 47.0
HanXRQCPg0579741 Helianthus annuus HOM05D004473 ORTHO05D005652 4.6e-99 365.5 506 47.0
CAN.G939.10 Capsicum annuum HOM05D004473 ORTHO05D005652 2.3e-98 363.2 507 46.0
PGR111G0117 Punica granatum HOM05D004473 ORTHO05D005652 2.5e-97 359.8 501 46.3
SalBow1G8010 Salvia bowleyana HOM05D004473 ORTHO05D005652 9.0e-95 351.3 506 44.1
Hund10683 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.2e-94 350.9 254 74.8
Medtr3g035685 Medicago truncatula HOM05D004473 ORTHO05D005652 5.8e-94 348.6 509 43.6
HanXRQChr11g0326581 Helianthus annuus HOM05D004473 ORTHO05D005652 2.9e-93 346.3 453 49.7
Medtr4g051280 Medicago truncatula HOM05D004473 ORTHO05D005652 1.9e-92 343.6 491 44.2
Solyc00g500048.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 2.7e-91 339.7 452 48.9
Solyc00g500131.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 2.7e-91 339.7 452 48.9
Solyc00g500201.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 2.7e-91 339.7 452 48.9
Solyc00g500295.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 2.7e-91 339.7 452 48.9
Solyc00g500330.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 2.7e-91 339.7 452 48.9
Sed0024057 Sechium edule HOM05D004473 ORTHO05D005652 2.3e-90 336.7 498 43.6
Medtr7g021760 Medicago truncatula HOM05D004473 ORTHO05D005652 6.7e-90 335.1 490 44.9
PSO548G0076 Papaver somniferum HOM05D004473 ORTHO05D005652 5.3e-87 325.5 511 43.2
HanXRQChr00c0125g0571751 Helianthus annuus HOM05D004473 ORTHO05D005652 2.9e-85 319.7 493 44.0
ATCG00040 Arabidopsis thaliana HOM05D004473 ORTHO05D005652 1.4e-84 317.4 510 41.2
LjContig00318g0021272 Lotus japonicus HOM05D004473 ORTHO05D005652 1.2e-83 314.3 475 42.3
Eucgr.D01147 Eucalyptus grandis HOM05D004473 ORTHO05D005652 1.3e-82 310.8 386 50.8
BcaC05g28805 Brassica carinata HOM05D004473 ORTHO05D005652 2.3e-82 310.1 510 41.0
C06p21390 Brassica napus HOM05D004473 ORTHO05D005652 6.7e-82 308.5 510 40.6
BraSC143t45676Z Brassica rapa HOM05D004473 ORTHO05D005652 8.7e-82 308.1 510 40.8
Medtr0002s0390 Medicago truncatula HOM05D004473 ORTHO05D005652 1.1e-79 301.2 508 39.6
TWI34G1450 Tripterygium wilfordii HOM05D004473 ORTHO05D005652 4.5e-78 295.8 440 43.2
Eucgr.D00924 Eucalyptus grandis HOM05D004473 ORTHO05D005652 2.2e-77 293.5 437 43.5
Sed0017792 Sechium edule HOM05D004473 ORTHO05D005652 7.2e-76 288.5 504 39.3
Lsat_1_v5_gn_7_76981 Lactuca sativa HOM05D004473 ORTHO05D005652 1.0e-74 284.6 446 42.8
Gohir.A04G039120 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.4e-74 284.3 453 43.7
Lalb_Chr07g0191541 Lupinus albus HOM05D004473 ORTHO05D005652 5.7e-73 278.9 511 40.1
Gohir.A04G039150 Gossypium hirsutum HOM05D004473 ORTHO05D005652 2.2e-72 276.9 373 49.1
LjContig00489g0020099 Lotus japonicus HOM05D004473 ORTHO05D005652 7.9e-67 258.5 470 40.2
Gohir.1Z050066 Gossypium hirsutum HOM05D004473 ORTHO05D005652 2.8e-64 250.0 452 39.2
BraSC25t45889Z Brassica rapa HOM05D004473 ORTHO05D005652 4.8e-64 249.2 470 38.3
BraSC151t45687Z Brassica rapa HOM05D004473 ORTHO05D005652 1.3e-61 241.1 316 47.2
CAN.G386.22 Capsicum annuum HOM05D004473 ORTHO05D005652 1.5e-57 227.6 257 50.6
Gohir.1Z049403 Gossypium hirsutum HOM05D004473 ORTHO05D005652 9.7e-57 224.9 256 52.3
Lj2P1238T61 Lonicera japonica HOM05D004473 ORTHO05D005652 1.7e-56 224.2 338 42.6
arahy.Tifrunner.gnm1.ann1.40BINF Arachis hypogaea HOM05D004473 ORTHO05D005652 1.1e-55 221.5 279 48.4
Nn4g24630 Nelumbo nucifera HOM05D004473 ORTHO05D005652 4.2e-52 209.5 181 61.3
SGA_v2.0_scaffold479G52250 Striga asiatica HOM05D004473 ORTHO05D005652 1.2e-51 208.0 392 38.8
Lsat_1_v5_gn_2_89740 Lactuca sativa HOM05D004473 ORTHO05D005652 2.7e-51 206.8 257 49.0
Nitab4.5_0007979g0030 Nicotiana tabacum HOM05D001387 ORTHO05D001250 1.8e-50 204.1 336 42.6
Peaxi162Scf00219g00048 Petunia axillaris HOM05D004473 ORTHO05D001250 3.0e-50 203.4 334 41.9
Peaxi162Scf00211g00244 Petunia axillaris HOM05D004473 ORTHO05D005652 4.4e-49 199.5 274 47.4
GSVIVG01022885001 Vitis vinifera HOM05D004473 ORTHO05D005652 4.8e-48 196.1 360 38.9
Psat0s1330g0240 Pisum sativum HOM05D004473 ORTHO05D005652 1.4e-42 177.9 191 53.9
HanXRQChr00c0572g0575931 Helianthus annuus HOM05D004473 ORTHO05D005652 4.4e-41 172.9 204 49.5
Hund10684 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.0e-38 164.1 89 89.9
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 4.7e-35 152.9 252 36.9
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 4.7e-35 152.9 252 36.9
Nn2g10392 Nelumbo nucifera HOM05D004473 ORTHO05D005652 1.0e-34 151.8 158 55.1
Gorai.001G044100 Gossypium raimondii HOM05D004473 ORTHO05D005652 1.1e-31 141.7 250 41.2
Oeu012780.1 Olea europaea HOM05D001387 ORTHO05D001250 1.3e-29 134.8 127 58.3
Gohir.A08G070362 Gossypium hirsutum HOM05D004473 ORTHO05D005652 2.3e-29 134.0 94 75.5
BcaB03g16404 Brassica carinata HOM05D004473 ORTHO05D005652 1.5e-28 131.3 218 41.7
HanXRQChr00c0126g0571831 Helianthus annuus HOM05D004473 ORTHO05D005652 7.3e-28 129.0 86 72.1
PGSC0003DMG400041047 Solanum tuberosum HOM05D004473 ORTHO05D005652 2.8e-27 127.1 86 72.1
Nitab4.5_0011099g0050 Nicotiana tabacum HOM05D004473 ORTHO05D005652 2.3e-26 124.0 86 70.9
Gohir.A08G095662 Gossypium hirsutum HOM05D004473 ORTHO05D005652 3.1e-26 123.6 187 45.5
HanXRQChr00c0524g0575451 Helianthus annuus HOM05D004473 ORTHO05D005652 4.0e-26 123.2 175 41.7
CAN.G85.6 Capsicum annuum HOM05D004473 ORTHO05D005652 2.0e-25 120.9 86 69.8
Nn020s41490 Nelumbo nucifera HOM05D004473 ORTHO05D005652 3.4e-25 120.2 86 69.8
Nitab4.5_0001439g0120 Nicotiana tabacum HOM05D004473 ORTHO05D005652 4.4e-25 119.8 86 70.9
CAN.G1738.12 Capsicum annuum HOM05D004473 ORTHO05D005652 9.8e-25 118.6 86 68.6
Gorai.001G230600 Gossypium raimondii HOM05D004473 ORTHO05D005652 9.8e-25 118.6 94 70.2
Solyc09g061390.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 2.9e-24 117.1 116 56.0
HanXRQChr16g0503961 Helianthus annuus HOM05D004473 ORTHO05D005652 3.7e-24 116.7 136 58.1
BolC2t10578H Brassica oleracea HOM05D004473 ORTHO05D005652 1.4e-23 114.8 89 64.0
BolSC37t60777H Brassica oleracea HOM05D004473 ORTHO05D005652 1.4e-23 114.8 89 64.0
BolSC45t60885H Brassica oleracea HOM05D004473 ORTHO05D005652 1.4e-23 114.8 89 64.0
BolSC45t60929H Brassica oleracea HOM05D004473 ORTHO05D005652 1.4e-23 114.8 89 64.0
BolSC46t60978H Brassica oleracea HOM05D004473 ORTHO05D005652 1.4e-23 114.8 89 64.0
Thhalv10001851m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 1.9e-23 114.4 182 38.5
Thhalv10028154m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 1.9e-23 114.4 89 62.9
HanXRQChr16g0503951 Helianthus annuus HOM05D004473 ORTHO05D005652 1.9e-23 114.4 83 67.5
Gohir.A07G155811 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.2e-22 111.7 88 67.0
HanXRQChr00c0165g0572171 Helianthus annuus HOM05D004473 ORTHO05D005652 1.6e-22 111.3 117 60.7
Peaxi162Scf00219g00049 Petunia axillaris HOM05D004473 ORTHO05D005652 2.7e-22 110.5 84 66.7
CAN.G100.39 Capsicum annuum HOM05D004473 ORTHO05D005652 3.5e-22 110.2 86 65.1
Thhalv10012215m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 1.0e-21 108.6 255 36.9
Medtr7g117940 Medicago truncatula HOM05D004473 ORTHO05D005652 1.5e-20 104.8 92 59.8
Gorai.002G165800 Gossypium raimondii HOM05D001387 ORTHO05D001250 3.6e-19 100.1 191 37.2
Nn1g08463 Nelumbo nucifera HOM05D004473 ORTHO05D005652 8.9e-18 95.5 95 57.9
arahy.Tifrunner.gnm1.ann1.EJ7WQI Arachis hypogaea HOM05D004473 ORTHO05D005652 3.4e-17 93.6 131 49.6
BraSC59t46519Z Brassica rapa HOM05D004473 ORTHO05D005652 1.9e-15 87.8 140 42.9
Medtr2g089590 Medicago truncatula HOM05D004473 ORTHO05D005652 3.2e-15 87.0 87 56.3
Gorai.013G056700 Gossypium raimondii HOM05D004473 ORTHO05D005652 2.1e-14 84.3 119 46.2
Nn8g40470 Nelumbo nucifera HOM05D004473 ORTHO05D005652 4.6e-14 83.2 54 75.9
Peaxi162Scf00211g00223 Petunia axillaris HOM05D004473 ORTHO05D005652 1.3e-13 81.6 52 75.0
MELO3C027413.2 Cucumis melo HOM05D004473 ORTHO05D005652 1.7e-13 81.3 65 61.5
HanXRQChr00c0165g0572181 Helianthus annuus HOM05D004473 ORTHO05D005652 3.0e-13 80.5 119 42.0
MD15G1438900 Malus domestica HOM05D004473 ORTHO05D005652 6.6e-13 79.3 65 66.2
Medtr2g089600 Medicago truncatula HOM05D004473 ORTHO05D005652 2.5e-12 77.4 57 63.2
Hund04106 Selenicereus undatus HOM05D004473 ORTHO05D005652 4.3e-12 76.6 89 50.6
Lalb_Chr13g0292931 Lupinus albus HOM05D004473 ORTHO05D005652 7.3e-12 75.9 82 50.0
BolSC49t61206H Brassica oleracea HOM05D004473 ORTHO05D005652 2.8e-11 73.9 52 71.2
HanXRQChr00c0496g0575171 Helianthus annuus HOM05D004473 ORTHO05D005652 6.2e-11 72.8 80 45.0
Medtr7g098060 Medicago truncatula HOM05D004473 ORTHO05D005652 1.4e-10 71.6 127 37.8
GSVIVG01022429001 Vitis vinifera HOM05D004473 ORTHO05D005652 2.3e-10 70.9 36 80.6
Oeu062869.1 Olea europaea HOM05D004473 ORTHO05D005652 4.0e-10 70.1 61 54.1
MELO3C000879.2 Cucumis melo HOM05D004473 ORTHO05D005652 5.2e-10 69.7 56 60.7
MELO3C027497.2 Cucumis melo HOM05D004473 ORTHO05D005652 5.2e-10 69.7 56 60.7
Migut.D01408 Erythranthe guttata HOM05D004473 ORTHO05D005652 6.8e-10 69.3 332 30.4
GSVIVG01001302001 Vitis vinifera HOM05D004473 ORTHO05D005652 1.7e-08 64.7 52 65.4
Manes.10G075803 Manihot esculenta HOM05D004473 ORTHO05D005652 4.9e-08 63.2 52 63.5
Atru.chr7.156 Acer truncatum HOM05D004473 ORTHO05D005652 8.4e-08 62.4 81 46.9
TPR.G40774 Trifolium pratense HOM05D004473 ORTHO05D005652 2.7e-06 57.4 42 71.4
CSS0010292 Camellia sinensis var. sinensis HOM05D004473 ORTHO05D005652 3.5e-06 57.0 35 74.3


User provided reference genes

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