Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund11156 Selenicereus undatus HOM05D005449 ORTHO05D006916 3.8e-74 281.6 158 100.0
Ah.08g213380 Amaranthus hybridus HOM05D005449 ORTHO05D006916 1.4e-52 209.9 158 70.3
EL10Ac7g17526 Beta vulgaris HOM05D005449 ORTHO05D006916 5.0e-50 201.4 158 70.3
Hma1.2p1_1986F.1_g310070 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 6.8e-47 191.0 158 69.0
Hma1.2p1_2044F.1_g312372 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 6.8e-47 191.0 158 69.0
QL12p028306 Quercus lobata HOM05D005449 ORTHO05D006916 6.8e-47 191.0 157 68.2
CSS0004919 Camellia sinensis var. sinensis HOM05D005449 ORTHO05D006916 8.8e-47 190.7 158 69.0
Rhsim06G0059700 Rhododendron simsii HOM05D005449 ORTHO05D006916 8.8e-47 190.7 134 73.9
Dinv33060 Davidia involucrata HOM05D005449 ORTHO05D006916 1.5e-46 189.9 158 68.4
Cfa005902 Carpinus fangiana HOM05D005449 ORTHO05D006916 2.0e-46 189.5 158 68.4
Dinv44016 Davidia involucrata HOM05D005449 ORTHO05D006916 2.0e-46 189.5 119 81.5
TAR636G0282 Trochodendron aralioides HOM05D005449 ORTHO05D006916 2.0e-46 189.5 158 67.7
Prupe.8G140700 Prunus persica HOM05D005449 ORTHO05D006916 3.4e-46 188.7 159 67.9
TWI14G0435 Tripterygium wilfordii HOM05D005449 ORTHO05D006916 5.7e-46 188.0 147 69.4
Manes.05G061600 Manihot esculenta HOM05D005449 ORTHO05D006916 7.5e-46 187.6 158 67.1
Nn3g21512 Nelumbo nucifera HOM05D005449 ORTHO05D006916 7.5e-46 187.6 119 80.7
FAN20G1025 Fragaria x ananassa HOM05D005449 ORTHO05D006916 1.7e-45 186.4 125 78.4
Aqoxy1G00207 Aquilegia oxysepala HOM05D005449 ORTHO05D006916 2.2e-45 186.0 126 76.2
RcHm_v2.0_Chr6g0252971 Rosa chinensis HOM05D005449 ORTHO05D006916 4.8e-45 184.9 125 78.4
CANSAT25G1565 Cannabis sativa HOM05D005449 ORTHO05D006916 6.3e-45 184.5 158 67.7
FAN15G2928 Fragaria x ananassa HOM05D005449 ORTHO05D006916 6.3e-45 184.5 125 77.6
FAN27G2298 Fragaria x ananassa HOM05D005449 ORTHO05D006916 6.3e-45 184.5 125 77.6
Lj4g0006553 Lotus japonicus HOM05D005449 ORTHO05D006916 6.3e-45 184.5 158 65.2
DCAR_002842 Daucus carota HOM05D005449 ORTHO05D006916 8.3e-45 184.1 158 67.7
Migut.D00146 Erythranthe guttata HOM05D005449 ORTHO05D006916 1.1e-44 183.7 121 80.2
Gohir.D12G133700 Gossypium hirsutum HOM05D005449 ORTHO05D006916 1.4e-44 183.3 122 76.2
Gorai.008G144700 Gossypium raimondii HOM05D005449 ORTHO05D006916 1.4e-44 183.3 122 76.2
ECA236G0849 Erigeron canadensis HOM05D005449 ORTHO05D006916 2.4e-44 182.6 118 80.5
Glyma.05G185600 Glycine max HOM05D005449 ORTHO05D006916 2.4e-44 182.6 121 76.9
Lsat_1_v5_gn_8_164201 Lactuca sativa HOM05D005449 ORTHO05D006916 3.1e-44 182.2 121 77.7
MD05G1096300 Malus domestica HOM05D005449 ORTHO05D006916 3.1e-44 182.2 158 65.8
Oeu054120.1 Olea europaea HOM05D005449 ORTHO05D006916 4.1e-44 181.8 158 67.1
Cc01_g20940 Coffea canephora HOM05D005449 ORTHO05D006916 5.4e-44 181.4 159 67.3
Duzib138G1099 Durio zibethinus HOM05D005449 ORTHO05D006916 5.4e-44 181.4 127 74.0
FvH4_2g03920 Fragaria vesca HOM05D005449 ORTHO05D006916 5.4e-44 181.4 125 76.8
HanXRQChr06g0163691 Helianthus annuus HOM05D005449 ORTHO05D006916 5.4e-44 181.4 127 75.6
Ca_17681_v3 Cicer arietinum L. HOM05D005449 ORTHO05D006916 7.0e-44 181.0 121 76.0
Ca_29605_v3 Cicer arietinum L. HOM05D005449 ORTHO05D006916 7.0e-44 181.0 121 76.0
Ciclev10022754m.g Citrus clementina HOM05D005449 ORTHO05D006916 7.0e-44 181.0 116 81.0
COL.COLO4_23333 Corchorus olitorius HOM05D005449 ORTHO05D006916 7.0e-44 181.0 138 71.0
Oeu024404.1 Olea europaea HOM05D005449 ORTHO05D006916 7.0e-44 181.0 138 72.5
Phvul.002G266700 Phaseolus vulgaris HOM05D005449 ORTHO05D006916 7.0e-44 181.0 121 76.9
SGA_v2.0_scaffold1G00359 Striga asiatica HOM05D005449 ORTHO05D006916 7.0e-44 181.0 121 79.3
THA.LOC104817488 Tarenaya hassleriana HOM05D005449 ORTHO05D006916 7.0e-44 181.0 118 79.7
MSTRG.21637 Avicennia marina HOM05D005449 ORTHO05D006916 9.1e-44 180.6 119 80.7
MELO3C017987.2 Cucumis melo HOM05D005449 ORTHO05D006916 9.1e-44 180.6 158 63.3
RcHm_v2.0_Chr6g0252941 Rosa chinensis HOM05D005449 ORTHO05D006916 9.1e-44 180.6 125 76.8
Thecc.01G301700 Theobroma cacao HOM05D005449 ORTHO05D006916 1.2e-43 180.3 119 77.3
CsaV3_4G000480 Cucumis sativus L. HOM05D005449 ORTHO05D006916 1.6e-43 179.9 158 63.9
Duzib211G0575 Durio zibethinus HOM05D005449 ORTHO05D006916 2.7e-43 179.1 138 69.6
Sed0024679 Sechium edule HOM05D005449 ORTHO05D006916 2.7e-43 179.1 158 64.6
Gohir.A12G129900 Gossypium hirsutum HOM05D005449 ORTHO05D006916 3.5e-43 178.7 122 74.6
Medtr8g092180 Medicago truncatula HOM05D005449 ORTHO05D006916 4.5e-43 178.3 158 62.0
PSO675G2222 Papaver somniferum HOM05D005449 ORTHO05D006916 4.5e-43 178.3 126 74.6
GSVIVG01028030001 Vitis vinifera HOM05D005449 ORTHO05D006916 4.5e-43 178.3 110 84.5
CAN.G857.16 Capsicum annuum HOM05D005449 ORTHO05D006916 5.9e-43 177.9 126 75.4
Potri.014G127900 Populus trichocarpa HOM05D005449 ORTHO05D006916 5.9e-43 177.9 158 65.8
Sopen08g023260 Solanum pennellii HOM05D005449 ORTHO05D006916 5.9e-43 177.9 158 65.2
CiPaw.07G110200 Carya illinoinensis HOM05D005449 ORTHO05D006916 7.7e-43 177.6 158 65.8
RcHm_v2.0_Chr4g0408421 Rosa chinensis HOM05D005449 ORTHO05D006916 7.7e-43 177.6 119 76.5
Sabra14G0095000 Salix brachista HOM05D005449 ORTHO05D006916 7.7e-43 177.6 116 79.3
AUR62008679 Chenopodium quinoa HOM05D005449 ORTHO05D006916 1.0e-42 177.2 158 68.4
Solyc08g074670.3 Solanum lycopersicum HOM05D005449 ORTHO05D006916 1.0e-42 177.2 158 64.6
vmacro09952 Vaccinium macrocarpon HOM05D005449 ORTHO05D006916 1.0e-42 177.2 145 66.2
MBI18_g24865_MAGBIO Magnolia biondii HOM05D005449 ORTHO05D006916 1.3e-42 176.8 129 72.9
PGR119G1363 Punica granatum HOM05D005449 ORTHO05D006916 1.3e-42 176.8 119 79.0
Eucgr.F02473 Eucalyptus grandis HOM05D005449 ORTHO05D006916 1.7e-42 176.4 158 65.2
FAN22G2041 Fragaria x ananassa HOM05D005449 ORTHO05D006916 1.7e-42 176.4 119 74.8
TWI59G1340 Tripterygium wilfordii HOM05D005449 ORTHO05D006916 1.7e-42 176.4 119 78.2
FvH4_4g11510 Fragaria vesca HOM05D005449 ORTHO05D006916 2.9e-42 175.6 119 73.9
FAN07G2516 Fragaria x ananassa HOM05D005449 ORTHO05D006916 3.8e-42 175.3 119 73.9
Nitab4.5_0008438g0020 Nicotiana tabacum HOM05D005449 ORTHO05D006916 6.5e-42 174.5 123 76.4
PGSC0003DMG400018921 Solanum tuberosum HOM05D005449 ORTHO05D006916 6.5e-42 174.5 158 63.9
CiPaw.08G094600 Carya illinoinensis HOM05D005449 ORTHO05D006916 1.5e-41 173.3 158 62.0
Cpa.g.sc9.253 Carica papaya HOM05D005449 ORTHO05D006916 3.2e-41 172.2 119 75.6
Actinidia21206 Actinidia chinensis HOM05D005449 ORTHO05D006916 4.2e-41 171.8 121 73.6
Sc04g0009560 Simmondsia chinensis HOM05D005449 ORTHO05D006916 4.2e-41 171.8 155 62.6
Lalb_Chr03g0036381 Lupinus albus HOM05D005449 ORTHO05D006916 7.2e-41 171.0 117 76.1
Rhsim09G0186400 Rhododendron simsii HOM05D005449 ORTHO05D006916 7.2e-41 171.0 161 60.9
arahy.Tifrunner.gnm1.ann1.X8E93Z Arachis hypogaea HOM05D005449 ORTHO05D006916 1.2e-40 170.2 119 72.3
arahy.Tifrunner.gnm1.ann1.YB8ZH2 Arachis hypogaea HOM05D005449 ORTHO05D006916 1.2e-40 170.2 119 72.3
Os05g0154900 Oryza sativa ssp. japonica HOM05D005449 ORTHO05D006916 2.1e-40 169.5 146 67.1
Peaxi162Scf00445g00079 Petunia axillaris HOM05D005449 ORTHO05D006916 2.7e-40 169.1 158 62.7
ClCG10G010560 Citrullus lanatus HOM05D005449 ORTHO05D006916 6.1e-40 167.9 170 59.4
unitig_26.g10174 Utricularia gibba HOM05D005449 ORTHO05D006916 6.1e-40 167.9 158 60.1
Peaxi162Scf00045g01343 Petunia axillaris HOM05D005449 ORTHO05D006916 8.0e-40 167.5 119 73.9
CDE05G2918 Ceratophyllum demersum HOM05D005449 ORTHO05D006916 1.0e-39 167.2 157 61.8
Glyma.08G143600 Glycine max HOM05D005449 ORTHO05D006916 1.0e-39 167.2 149 61.1
Solyc08g005920.3 Solanum lycopersicum HOM05D005449 ORTHO05D006916 1.8e-39 166.4 119 73.9
Nitab4.5_0002276g0010 Nicotiana tabacum HOM05D005449 ORTHO05D006916 3.0e-39 165.6 155 63.2
Psat7g049640 Pisum sativum HOM05D005449 ORTHO05D006916 3.0e-39 165.6 119 72.3
PGSC0003DMG400004469 Solanum tuberosum HOM05D005449 ORTHO05D006916 5.2e-39 164.9 126 71.4
TPR.G2165 Trifolium pratense HOM05D005449 ORTHO05D006916 5.2e-39 164.9 119 71.4
Sopen08g001890 Solanum pennellii HOM05D005449 ORTHO05D006916 6.8e-39 164.5 119 72.3
AL5G33630 Arabidopsis lyrata HOM05D005449 ORTHO05D006916 2.6e-38 162.5 119 73.1
VMungo0251G2862 Vigna mungo HOM05D000587 ORTHO05D000929 1.3e-37 160.2 121 68.6
Nitab4.5_0000860g0030 Nicotiana tabacum HOM05D005449 ORTHO05D006916 3.7e-37 158.7 119 72.3
ATR0582G023 Amborella trichopoda HOM05D005449 ORTHO05D006916 6.3e-37 157.9 119 68.1
AUR62025565 Chenopodium quinoa HOM05D005449 ORTHO05D006916 1.8e-36 156.4 158 59.5
Zm00001eb346090 Zea mays HOM05D005449 ORTHO05D006916 7.0e-36 154.5 120 69.2
HPP92_010681 Vanilla planifolia HOM05D005449 ORTHO05D006916 4.5e-35 151.8 118 70.3
Lsat_1_v5_gn_7_53001 Lactuca sativa HOM05D005449 ORTHO05D006916 2.1e-32 142.9 116 69.8
SMO367G0046 Selaginella moellendorffii HOM05D005449 ORTHO05D006916 4.0e-31 138.7 117 62.4
Carub.0005s1933 Capsella rubella HOM05D005449 ORTHO05D006916 6.8e-31 137.9 119 64.7
CARHR162730 Cardamine hirsuta HOM05D005449 ORTHO05D006916 1.2e-30 137.1 119 65.5
Pp3c14_5880 Physcomitrium patens HOM05D005449 ORTHO05D006916 1.2e-30 137.1 117 61.5
BcaB01g00336 Brassica carinata HOM05D005449 ORTHO05D006916 1.5e-30 136.7 119 64.7
Thhalv10010784m.g Eutrema salsugineum HOM05D005449 ORTHO05D006916 1.5e-30 136.7 153 55.6
Sp5g09480 Schrenkiella parvula HOM05D005449 ORTHO05D006916 1.5e-30 136.7 84 83.3
Atru.chr5.1135 Acer truncatum HOM05D005449 ORTHO05D006916 2.0e-30 136.3 83 81.9
AT3G52860 Arabidopsis thaliana HOM05D005449 ORTHO05D006916 2.6e-30 136.0 119 65.5
A09p45940 Brassica napus HOM05D005449 ORTHO05D006916 5.7e-30 134.8 119 63.9
BolC8t50425H Brassica oleracea HOM05D005449 ORTHO05D006916 5.7e-30 134.8 119 63.9
C08p28130 Brassica napus HOM05D005449 ORTHO05D006916 9.8e-30 134.0 119 63.0
BraA09t40054Z Brassica rapa HOM05D005449 ORTHO05D006916 9.8e-30 134.0 119 63.0
RcHm_v2.0_Chr6g0264541 Rosa chinensis HOM05D005449 ORTHO05D006916 3.7e-29 132.1 88 77.3
Haze_04950 Corylus avellana HOM05D005449 ORTHO05D006916 9.2e-28 127.5 83 79.5
HanXRQChr06g0163731 Helianthus annuus HOM05D005449 ORTHO05D006916 9.2e-28 127.5 84 78.6
SEGI_14448 Sequoiadendron giganteum HOM05D005449 ORTHO05D006916 9.2e-28 127.5 119 58.8
AagrBONN_evm.TU.Sc2ySwM_117.989 Anthoceros agrestis HOM05D005449 ORTHO05D006916 1.7e-26 123.2 117 59.8
MD10G1102600 Malus domestica HOM05D005449 ORTHO05D006916 1.7e-26 123.2 85 74.1
Ciclev10033890m.g Citrus clementina HOM05D005449 ORTHO05D006916 2.3e-26 122.9 147 51.7
HanXRQChr10g0316901 Helianthus annuus HOM05D005449 ORTHO05D006916 5.6e-25 118.2 67 86.6
FvH4_7g29690 Fragaria vesca HOM05D005449 ORTHO05D006916 2.1e-24 116.3 74 77.0
Mapoly0162s0020 Marchantia polymorpha HOM05D005449 ORTHO05D006916 5.8e-22 108.2 117 52.1
Atru.chr11.2437 Acer truncatum HOM05D005449 ORTHO05D006916 1.3e-21 107.1 151 44.4
PSO675G2923 Papaver somniferum HOM05D005449 ORTHO05D006916 1.3e-21 107.1 81 67.9
Actinidia07783 Actinidia chinensis HOM05D005449 ORTHO05D006916 5.4e-20 101.7 73 75.3
Zm00001eb085090 Zea mays HOM05D005449 ORTHO05D006916 1.6e-16 90.1 111 48.6
Zm00001eb340530 Zea mays HOM05D005449 ORTHO05D006916 6.8e-15 84.7 91 53.8
BcaC07g39651 Brassica carinata HOM05D001272 ORTHO05D001843 2.7e-11 72.8 85 51.8
Manes.01G220201 Manihot esculenta HOM05D005449 ORTHO05D006916 6.0e-11 71.6 84 51.2
Hma1.2p1_0276F.1_g111190 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 5.1e-10 68.6 50 66.0
FAN17G0623 Fragaria x ananassa HOM05D005449 ORTHO05D006916 7.3e-09 64.7 35 85.7
CBR_g10859 Chara braunii HOM05D005449 ORTHO05D006916 5.2e-07 58.5 106 34.0
Hma1.2p1_0494F.1_g165230 Hydrangea macrophylla HOM05D005449 ORTHO05D006916 8.9e-07 57.8 33 78.8
Aa31LG10G7880 Aethionema arabicum HOM05D005449 ORTHO05D006916 4.4e-06 55.5 74 50.0


User provided reference genes

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