Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund11127 Selenicereus undatus HOM05D000107 ORTHO05D010932 4.3e-228 794.3 389 100.0
Hund22860 Selenicereus undatus HOM05D000107 ORTHO05D010932 9.3e-82 308.1 232 67.2
Hund03722 Selenicereus undatus HOM05D000107 ORTHO05D010932 5.3e-77 292.4 285 57.9
AUR62007687 Chenopodium quinoa HOM05D000107 ORTHO05D010932 1.3e-62 244.6 347 39.2
AUR62029573 Chenopodium quinoa HOM05D000107 ORTHO05D010932 1.3e-62 244.6 347 39.2
AUR62016577 Chenopodium quinoa HOM05D000107 ORTHO05D010932 2.8e-62 243.4 347 39.2
AUR62041941 Chenopodium quinoa HOM05D000107 ORTHO05D010932 3.7e-62 243.0 347 39.2
AUR62002886 Chenopodium quinoa HOM05D000107 ORTHO05D010932 3.5e-60 236.5 349 39.0
AUR62041359 Chenopodium quinoa HOM05D000107 ORTHO05D010932 1.6e-57 227.6 312 39.7
EL10Ac2g03557 Beta vulgaris HOM05D000107 ORTHO05D010932 4.8e-54 216.1 302 39.1
AUR62015304 Chenopodium quinoa HOM05D000107 ORTHO05D010932 4.8e-54 216.1 289 39.8
AUR62040134 Chenopodium quinoa HOM05D000107 ORTHO05D010932 2.6e-52 210.3 304 37.8
AUR62025836 Chenopodium quinoa HOM05D000107 ORTHO05D010932 4.5e-52 209.5 301 37.2
AUR62042482 Chenopodium quinoa HOM05D000107 ORTHO05D010932 6.5e-51 205.7 327 37.0
AUR62042470 Chenopodium quinoa HOM05D000107 ORTHO05D010932 2.6e-47 193.7 282 36.5
Hund15060 Selenicereus undatus HOM05D000107 ORTHO05D010932 3.4e-47 193.4 120 80.0
Hund18201 Selenicereus undatus HOM05D000185 ORTHO05D010932 4.4e-47 193.0 293 42.0
AUR62034130 Chenopodium quinoa HOM05D000107 ORTHO05D010932 9.4e-42 175.3 299 34.1
EL10Ac8g19342 Beta vulgaris HOM05D000107 ORTHO05D000062 8.0e-41 172.2 329 35.0
EL10Ac5g11849 Beta vulgaris HOM05D000107 ORTHO05D000062 2.8e-38 163.7 382 32.2
AUR62038581 Chenopodium quinoa HOM05D000107 ORTHO05D010932 6.3e-38 162.5 334 33.2
AUR62042483 Chenopodium quinoa HOM05D000107 ORTHO05D010932 1.4e-37 161.4 293 36.5
AUR62028478 Chenopodium quinoa HOM05D000107 ORTHO05D010932 1.8e-37 161.0 308 31.8
AUR62042986 Chenopodium quinoa HOM05D000107 ORTHO05D010932 1.9e-34 151.0 296 33.4
Hund12899 Selenicereus undatus HOM05D000107 ORTHO05D010932 1.2e-33 148.3 154 53.9
AUR62003344 Chenopodium quinoa HOM05D000107 ORTHO05D010932 2.6e-31 140.6 318 33.6
Ah.16g107310 Amaranthus hybridus HOM05D000107 ORTHO05D010932 1.8e-29 134.4 360 30.8
Sc14g0008150 Simmondsia chinensis HOM05D008654 ORTHO05D010476 4.1e-29 133.3 306 31.4
AUR62034555 Chenopodium quinoa HOM05D009516 ORTHO05D010476 4.7e-25 119.8 222 36.5
AUR62002722 Chenopodium quinoa HOM05D009516 ORTHO05D010476 1.8e-24 117.9 325 30.5
AUR62034756 Chenopodium quinoa HOM05D000107 ORTHO05D010932 1.2e-23 115.2 102 47.1
AUR62015848 Chenopodium quinoa HOM05D009516 ORTHO05D010476 2.4e-21 107.5 236 33.1
Ah.16g109650 Amaranthus hybridus HOM05D000107 ORTHO05D010932 1.2e-20 105.1 142 43.7
AUR62022208 Chenopodium quinoa HOM05D009516 ORTHO05D010476 4.6e-20 103.2 184 37.0
AUR62041237 Chenopodium quinoa HOM05D009516 ORTHO05D010476 4.6e-20 103.2 184 37.0
Sc13g0006520 Simmondsia chinensis HOM05D008654 ORTHO05D010476 4.6e-20 103.2 225 35.1
Ah.16g109640 Amaranthus hybridus HOM05D000107 ORTHO05D010932 6.0e-20 102.8 161 37.3
AUR62012476 Chenopodium quinoa HOM05D009516 ORTHO05D010476 2.3e-19 100.9 293 25.6
EL10Ac4g09876 Beta vulgaris HOM05D000107 ORTHO05D010932 3.0e-19 100.5 120 43.3
EL10As4g23432 Beta vulgaris HOM05D000107 ORTHO05D010932 3.9e-19 100.1 198 30.8
AUR62021362 Chenopodium quinoa HOM05D009516 ORTHO05D010476 8.1e-17 92.4 147 40.1
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 1.1e-16 92.0 143 41.3
Ah.13g067620 Amaranthus hybridus HOM05D032173 ORTHO05D031006 5.2e-16 89.7 100 50.0
AUR62021541 Chenopodium quinoa HOM05D009516 ORTHO05D010476 8.9e-16 89.0 129 39.5
EL10Ac2g03949 Beta vulgaris HOM05D009516 ORTHO05D010476 4.4e-15 86.7 100 47.0
Hund06775 Selenicereus undatus HOM05D001381 ORTHO05D001230 7.5e-15 85.9 255 28.2
EL10Ac2g04270 Beta vulgaris HOM05D009516 ORTHO05D010476 1.3e-14 85.1 100 47.0
EL10Ac6g13764 Beta vulgaris HOM05D009516 ORTHO05D010476 1.3e-14 85.1 100 47.0
AUR62032700 Chenopodium quinoa HOM05D009516 ORTHO05D010476 1.7e-14 84.7 76 53.9
AUR62042776 Chenopodium quinoa HOM05D009516 ORTHO05D010476 2.9e-14 84.0 131 37.4
AUR62023814 Chenopodium quinoa HOM05D009516 ORTHO05D010476 3.7e-14 83.6 108 43.5
EL10Ac8g19925 Beta vulgaris HOM05D000107 ORTHO05D000062 4.9e-14 83.2 155 32.9
Sc08g0006040 Simmondsia chinensis HOM05D008654 ORTHO05D010476 4.9e-14 83.2 260 30.0
AUR62026517 Chenopodium quinoa HOM05D009516 ORTHO05D010476 1.9e-13 81.3 179 33.5
Sc14g0003090 Simmondsia chinensis HOM05D008654 ORTHO05D010476 5.4e-13 79.7 260 29.2
EL10Ac4g09036 Beta vulgaris HOM05D001881 ORTHO05D010932 1.6e-12 78.2 150 34.0
Sc17g0002790 Simmondsia chinensis HOM05D008654 ORTHO05D010476 2.7e-12 77.4 260 28.5
AUR62003819 Chenopodium quinoa HOM05D000107 ORTHO05D010932 3.5e-12 77.0 88 47.7
AUR62036302 Chenopodium quinoa HOM05D009516 ORTHO05D010476 6.0e-12 76.3 82 46.3
AUR62040386 Chenopodium quinoa HOM05D000107 ORTHO05D010932 1.0e-11 75.5 111 37.8
Hund12115 Selenicereus undatus HOM05D013639 ORTHO05D010932 1.0e-11 75.5 37 89.2
EL10Ac6g13823 Beta vulgaris HOM05D000107 ORTHO05D010932 1.3e-11 75.1 177 29.4
Sc08g0005840 Simmondsia chinensis HOM05D008654 ORTHO05D010476 3.9e-11 73.6 154 33.1
Hund22765 Selenicereus undatus HOM05D000185 ORTHO05D000105 8.6e-11 72.4 190 28.4
Ah.05g174730 Amaranthus hybridus HOM05D032173 ORTHO05D031006 1.1e-10 72.0 97 42.3
Sc10g0008320 Simmondsia chinensis HOM05D008654 ORTHO05D010476 4.3e-10 70.1 129 38.0
EL10Ac1g01905 Beta vulgaris HOM05D000107 ORTHO05D000062 5.6e-10 69.7 173 31.2
Hund22907 Selenicereus undatus HOM05D008654 ORTHO05D010476 7.3e-10 69.3 184 27.2
Sc26g0002460 Simmondsia chinensis HOM05D008654 ORTHO05D010476 9.5e-10 68.9 128 36.7
Hund15401 Selenicereus undatus HOM05D008654 ORTHO05D010476 1.2e-09 68.6 128 35.9
Ah.15g099280 Amaranthus hybridus HOM05D032173 ORTHO05D031006 2.1e-09 67.8 66 59.1
Glyma.08G123400 Glycine max HOM05D008291 ORTHO05D000669 8.1e-09 65.9 351 23.4
AUR62032049 Chenopodium quinoa HOM05D009516 ORTHO05D010476 1.8e-08 64.7 99 43.4
VMungo0251G2604 Vigna mungo HOM05D008291 ORTHO05D003568 3.1e-08 63.9 340 22.9
Sc11g0006680 Simmondsia chinensis HOM05D008654 ORTHO05D010476 4.0e-08 63.5 75 42.7
Phvul.002G246000 Phaseolus vulgaris HOM05D008291 ORTHO05D003568 6.8e-08 62.8 334 24.0
Oeu006554.1 Olea europaea HOM05D017951 ORTHO05D020916 8.9e-08 62.4 139 29.5
PGR004G1992 Punica granatum HOM05D000791 ORTHO05D000669 1.2e-07 62.0 347 24.5
Sopen09g001250 Solanum pennellii HOM05D008291 ORTHO05D000669 1.2e-07 62.0 315 26.0
TWI73G1228 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 2.6e-07 60.8 271 25.8
Sc19g0004530 Simmondsia chinensis HOM05D008654 ORTHO05D010476 7.6e-07 59.3 71 43.7
TWI18G1095 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 7.6e-07 59.3 271 25.5
Ah.01g010660 Amaranthus hybridus HOM05D000107 ORTHO05D010932 9.9e-07 58.9 138 31.9
Hund09708 Selenicereus undatus HOM05D014176 ORTHO05D010932 9.9e-07 58.9 85 42.4
Sc05g0004570 Simmondsia chinensis HOM05D008654 ORTHO05D010476 1.3e-06 58.5 121 35.5
AUR62032078 Chenopodium quinoa HOM05D008127 ORTHO05D010932 1.7e-06 58.2 66 45.5
Sc02g0005120 Simmondsia chinensis HOM05D008654 ORTHO05D010476 1.7e-06 58.2 71 40.8
Sc04g0004200 Simmondsia chinensis HOM05D008654 ORTHO05D010476 2.9e-06 57.4 122 37.7
EL10Ac4g07845 Beta vulgaris HOM05D009516 ORTHO05D010476 4.9e-06 56.6 128 33.6


User provided reference genes

Program Settings