Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund11103 Selenicereus undatus HOM05D006140 ORTHO05D007834 0.0e+00 1253.4 671 100.0
AUR62027322 Chenopodium quinoa HOM05D006140 ORTHO05D007834 2.4e-154 550.1 710 51.1
EL10Ac5g11927 Beta vulgaris HOM05D006140 ORTHO05D007834 7.3e-151 538.5 742 50.1
AUR62007410 Chenopodium quinoa HOM05D006140 ORTHO05D007834 6.0e-137 492.3 582 50.9
Sc22g0001920 Simmondsia chinensis HOM05D006140 ORTHO05D007834 6.1e-113 412.5 722 41.7
Ah.12g055990 Amaranthus hybridus HOM05D006140 ORTHO05D007834 2.5e-111 407.1 712 43.3
Dinv06909 Davidia involucrata HOM05D006140 ORTHO05D007834 6.5e-107 392.5 740 39.5
TAR629G0094 Trochodendron aralioides HOM05D006140 ORTHO05D007834 3.5e-100 370.2 687 41.8
Actinidia14773 Actinidia chinensis HOM05D006140 ORTHO05D007834 3.1e-93 347.1 738 37.3
CiPaw.11G100200 Carya illinoinensis HOM05D006140 ORTHO05D007834 6.8e-88 329.3 692 38.3
CSS0008724 Camellia sinensis var. sinensis HOM05D006140 ORTHO05D007834 9.7e-87 325.5 657 37.7
Duzib205G1045 Durio zibethinus HOM05D006140 ORTHO05D007834 9.7e-87 325.5 720 39.2
Prupe.5G025700 Prunus persica HOM05D006140 ORTHO05D007834 1.7e-86 324.7 741 35.2
Gohir.A12G205000 Gossypium hirsutum HOM05D006140 ORTHO05D007834 6.3e-86 322.8 729 35.0
FvH4_5g23380 Fragaria vesca HOM05D006140 ORTHO05D007834 9.1e-85 318.9 675 37.3
MD06G1024600 Malus domestica HOM05D006140 ORTHO05D007834 1.6e-84 318.2 660 35.9
Nn1g01908 Nelumbo nucifera HOM05D006140 ORTHO05D007834 7.7e-84 315.8 691 36.6
FAN18G2089 Fragaria x ananassa HOM05D006140 ORTHO05D007834 2.9e-83 313.9 679 37.1
RcHm_v2.0_Chr7g0212401 Rosa chinensis HOM05D006140 ORTHO05D007834 3.8e-83 313.5 693 36.4
Atru.chr6.1557 Acer truncatum HOM05D006140 ORTHO05D007834 8.5e-83 312.4 813 32.7
FAN18G2328 Fragaria x ananassa HOM05D006140 ORTHO05D007834 1.9e-82 311.2 680 37.1
QL12p000198 Quercus lobata HOM05D006140 ORTHO05D007834 7.2e-82 309.3 714 35.9
Potri.001G134800 Populus trichocarpa HOM05D006140 ORTHO05D007834 9.4e-82 308.9 747 36.3
Gorai.008G222800 Gossypium raimondii HOM05D006140 ORTHO05D007834 1.0e-80 305.4 733 34.7
TWI60G0968 Tripterygium wilfordii HOM05D006140 ORTHO05D007834 2.3e-80 304.3 762 35.7
Gohir.D12G207400 Gossypium hirsutum HOM05D006140 ORTHO05D007834 2.6e-79 300.8 733 34.2
Cfa012537 Carpinus fangiana HOM05D006140 ORTHO05D007834 3.4e-79 300.4 729 35.7
Manes.17G016001 Manihot esculenta HOM05D006140 ORTHO05D007834 1.7e-78 298.1 659 36.3
FAN08G2467 Fragaria x ananassa HOM05D006140 ORTHO05D007834 1.8e-77 294.7 682 36.7
Potri.003G098700 Populus trichocarpa HOM05D006140 ORTHO05D007834 4.1e-77 293.5 661 37.2
Sed0012782 Sechium edule HOM05D006140 ORTHO05D007834 2.7e-76 290.8 733 35.2
arahy.Tifrunner.gnm1.ann1.B53Y8P Arachis hypogaea HOM05D006140 ORTHO05D007834 1.0e-75 288.9 633 35.5
arahy.Tifrunner.gnm1.ann1.HKBA6R Arachis hypogaea HOM05D006140 ORTHO05D007834 1.0e-75 288.9 633 35.5
Lalb_Chr09g0325351 Lupinus albus HOM05D006140 ORTHO05D007834 2.9e-75 287.3 729 34.3
BcaC06g31534 Brassica carinata HOM05D006140 ORTHO05D007834 6.6e-75 286.2 653 34.9
ClCG09G011510 Citrullus lanatus HOM05D006140 ORTHO05D007834 6.6e-75 286.2 663 35.1
DCAR_008203 Daucus carota HOM05D006140 ORTHO05D007834 6.6e-75 286.2 685 36.5
Sp2g10500 Schrenkiella parvula HOM05D006140 ORTHO05D007834 1.1e-74 285.4 645 34.6
THA.LOC104798454 Tarenaya hassleriana HOM05D006140 ORTHO05D007834 5.5e-74 283.1 694 33.6
ECA233G4025 Erigeron canadensis HOM05D006140 ORTHO05D007834 9.5e-74 282.3 653 33.4
Glyma.09G210300 Glycine max HOM05D006140 ORTHO05D007834 4.7e-73 280.0 649 34.2
Migut.A00588 Erythranthe guttata HOM05D006140 ORTHO05D007834 6.1e-73 279.6 731 34.2
VMungo1215G1486 Vigna mungo HOM05D006140 ORTHO05D007834 6.1e-73 279.6 727 33.3
A06p46490 Brassica napus HOM05D006140 ORTHO05D007834 2.3e-72 277.7 659 34.4
BraA06t27522Z Brassica rapa HOM05D006140 ORTHO05D007834 5.2e-72 276.6 661 34.2
Glyma.01G010800 Glycine max HOM05D006140 ORTHO05D007834 6.8e-72 276.2 649 34.1
Phvul.002G133700 Phaseolus vulgaris HOM05D006140 ORTHO05D007834 1.5e-71 275.0 675 34.1
CANSAT21G0745 Cannabis sativa HOM05D006140 ORTHO05D007834 2.6e-71 274.2 680 33.8
BcaC06g34418 Brassica carinata HOM05D006140 ORTHO05D007834 4.4e-71 273.5 679 33.3
C07p28720 Brassica napus HOM05D006140 ORTHO05D007834 4.4e-71 273.5 679 33.3
BolC7t43410H Brassica oleracea HOM05D006140 ORTHO05D007834 4.4e-71 273.5 679 33.3
CsaV3_3G048750 Cucumis sativus L. HOM05D006140 ORTHO05D007834 4.4e-71 273.5 745 34.8
PGR042G2343 Punica granatum HOM05D006140 ORTHO05D007834 9.8e-71 272.3 655 34.5
HanXRQChr15g0469721 Helianthus annuus HOM05D006140 ORTHO05D007834 4.9e-70 270.0 617 35.0
Aa31LG9G7440 Aethionema arabicum HOM05D006140 ORTHO05D007834 1.2e-68 265.4 723 32.6
Aqoxy3G02157 Aquilegia oxysepala HOM05D006140 ORTHO05D007834 4.5e-68 263.5 522 36.8
SGA_v2.0_scaffold89G27431 Striga asiatica HOM05D006140 ORTHO05D007834 8.6e-67 259.2 738 32.2
Lj2g0005195 Lotus japonicus HOM05D006140 ORTHO05D007834 1.5e-66 258.5 645 31.6
Sopen08g024830 Solanum pennellii HOM05D006140 ORTHO05D007834 4.3e-66 256.9 724 30.7
Ca_25157_v3 Cicer arietinum L. HOM05D006140 ORTHO05D007834 6.8e-64 249.6 722 32.5
CARHR176410 Cardamine hirsuta HOM05D006140 ORTHO05D007834 5.8e-63 246.5 507 35.9
AT5G45610 Arabidopsis thaliana HOM05D006140 ORTHO05D007834 1.3e-62 245.4 735 31.0
Lsat_1_v5_gn_6_17700 Lactuca sativa HOM05D006140 ORTHO05D007834 1.7e-62 245.0 671 33.2
vmacro14212 Vaccinium macrocarpon HOM05D006140 ORTHO05D007834 4.9e-62 243.4 930 28.6
Solyc08g076190.3 Solanum lycopersicum HOM05D006140 ORTHO05D007834 8.3e-62 242.7 726 29.9
Thecc.03G312700 Theobroma cacao HOM05D006140 ORTHO05D007834 8.3e-62 242.7 721 32.6
Thhalv10000816m.g Eutrema salsugineum HOM05D006140 ORTHO05D007834 1.1e-61 242.3 714 32.5
Sabra01G0104200 Salix brachista HOM05D006140 ORTHO05D007834 1.4e-61 241.9 591 35.2
Nitab4.5_0003023g0010 Nicotiana tabacum HOM05D006140 ORTHO05D007834 9.2e-61 239.2 722 32.3
PSO063G5188 Papaver somniferum HOM05D006140 ORTHO05D007834 2.0e-60 238.0 662 31.7
FAN04G1734 Fragaria x ananassa HOM05D006140 ORTHO05D007834 1.0e-59 235.7 667 33.9
GSVIVG01012994001 Vitis vinifera HOM05D006140 ORTHO05D007834 1.0e-59 235.7 297 49.8
Peaxi162Scf00879g00021 Petunia axillaris HOM05D006140 ORTHO05D007834 2.3e-59 234.6 717 32.2
PSO782G1224 Papaver somniferum HOM05D006140 ORTHO05D007834 5.0e-59 233.4 663 31.2
AL8G13070 Arabidopsis lyrata HOM05D006140 ORTHO05D007834 6.6e-59 233.0 654 30.7
Psat2g140200 Pisum sativum HOM05D006140 ORTHO05D007834 1.1e-58 232.3 681 30.0
Nitab4.5_0000543g0200 Nicotiana tabacum HOM05D006140 ORTHO05D007834 2.5e-58 231.1 756 29.9
MELO3C030376.2 Cucumis melo HOM05D006140 ORTHO05D007834 2.8e-57 227.6 801 32.7
Rhsim07G0134400 Rhododendron simsii HOM05D006140 ORTHO05D007834 3.6e-57 227.3 685 30.5
Carub.0008s0241 Capsella rubella HOM05D006140 ORTHO05D007834 4.0e-56 223.8 712 30.1
Medtr5g027920 Medicago truncatula HOM05D006140 ORTHO05D007834 3.4e-55 220.7 720 31.8
TPR.G19464 Trifolium pratense HOM05D006140 ORTHO05D007834 3.4e-55 220.7 664 31.0
SalBow1G1748 Salvia bowleyana HOM05D006140 ORTHO05D007834 6.8e-48 196.4 711 29.8
ATR0829G104 Amborella trichopoda HOM05D006140 ORTHO05D007834 2.6e-47 194.5 520 32.5
Ciclev10003207m.g Citrus clementina HOM05D006140 ORTHO05D007834 7.6e-47 193.0 290 43.4
Cc00_g09430 Coffea canephora HOM05D006140 ORTHO05D007834 2.3e-43 181.4 276 42.8
HPP92_020808 Vanilla planifolia HOM05D006140 ORTHO05D007834 7.3e-42 176.4 792 27.1
Haze_08125 Corylus avellana HOM05D006140 ORTHO05D007834 8.4e-38 162.9 192 54.2
Lj3g0005794 Lotus japonicus HOM05D006140 ORTHO05D007834 5.1e-35 153.7 236 40.3
PGSC0003DMG401009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 2.1e-33 148.3 265 36.6
unitig_32.g10971 Utricularia gibba HOM05D006140 ORTHO05D007834 2.4e-32 144.8 499 27.3
Hma1.2p1_1460F.1_g284980 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 1.5e-31 142.1 254 41.7
Zm00001eb208860 Zea mays HOM05D006140 ORTHO05D007834 7.9e-28 129.8 504 26.4
Lj6g0014120 Lotus japonicus HOM05D006140 ORTHO05D007834 1.9e-26 125.2 153 47.1
Eucgr.E01307 Eucalyptus grandis HOM05D006140 ORTHO05D007834 6.2e-25 120.2 373 31.1
MBI04_g36019_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 8.1e-25 119.8 450 30.0
CDE02G1222 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 5.8e-23 113.6 155 45.8
MBI04_g20983_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 3.8e-22 110.9 133 51.9
Cc00_g09420 Coffea canephora HOM05D006140 ORTHO05D007834 1.0e-19 102.8 390 32.6
SEGI_17370 Sequoiadendron giganteum HOM05D006140 ORTHO05D007834 1.3e-19 102.4 698 22.6
SHI20257 Sapria himalayana HOM05D006140 ORTHO05D007834 4.8e-17 94.0 165 40.0
Actinidia24581 Actinidia chinensis HOM05D006140 ORTHO05D007834 2.4e-16 91.7 252 31.7
PGSC0003DMG402009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 1.0e-14 86.3 346 27.7
COL.COLO4_16905 Corchorus olitorius HOM05D006140 ORTHO05D007834 7.1e-13 80.1 316 28.8
CDE02G0505 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 1.9e-10 72.0 340 26.5
Ciclev10003621m.g Citrus clementina HOM05D006140 ORTHO05D007834 4.1e-08 64.3 240 26.7
SHI20259 Sapria himalayana HOM05D006140 ORTHO05D007834 4.1e-08 64.3 242 25.6
Oeu063929.1 Olea europaea HOM05D006140 ORTHO05D007834 6.9e-08 63.5 55 56.4
Hma1.2p1_1819F.1_g304030 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 2.6e-07 61.6 84 42.9
Hma1.2p1_1460F.1_g284990 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 5.0e-06 57.4 169 40.2


User provided reference genes

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