Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund11101 Selenicereus undatus HOM05D006475 ORTHO05D007969 2.3e-89 332.8 254 100.0
AUR62027319 Chenopodium quinoa HOM05D006475 ORTHO05D007969 2.4e-46 189.9 251 76.1
Ah.12g056010 Amaranthus hybridus HOM05D006475 ORTHO05D007969 2.7e-45 186.4 252 75.0
AUR62007413 Chenopodium quinoa HOM05D006475 ORTHO05D007969 3.5e-45 186.0 250 75.6
Haze_08058 Corylus avellana HOM05D006475 ORTHO05D007969 8.6e-36 154.8 256 67.6
Lj8A334T74 Lonicera japonica HOM05D006475 ORTHO05D007969 4.7e-34 149.1 249 68.3
EL10Ac5g11923 Beta vulgaris HOM05D006475 ORTHO05D007969 6.2e-34 148.7 252 67.5
Cfa012603 Carpinus fangiana HOM05D006475 ORTHO05D007969 1.4e-33 147.5 255 66.7
Actinidia14740 Actinidia chinensis HOM05D006475 ORTHO05D007969 4.0e-33 146.0 252 63.9
Haze_08048 Corylus avellana HOM05D006475 ORTHO05D007969 5.2e-33 145.6 264 65.2
Actinidia18163 Actinidia chinensis HOM05D006475 ORTHO05D007969 6.8e-33 145.2 256 64.8
TWI23G0232 Tripterygium wilfordii HOM05D006475 ORTHO05D007969 8.4e-31 138.3 258 64.0
Rhsim07G0139200 Rhododendron simsii HOM05D006475 ORTHO05D007969 1.1e-30 137.9 255 65.5
CiPaw.12G072000 Carya illinoinensis HOM05D006475 ORTHO05D007969 1.4e-30 137.5 255 64.7
Thecc.01G139200 Theobroma cacao HOM05D006475 ORTHO05D007969 1.9e-30 137.1 248 66.5
Potri.003G103400 Populus trichocarpa HOM05D006475 ORTHO05D007969 3.2e-30 136.3 245 65.7
Potri.001G130500 Populus trichocarpa HOM05D006475 ORTHO05D007969 4.1e-30 136.0 249 64.7
Sabra03G0070600 Salix brachista HOM05D006475 ORTHO05D007969 9.2e-30 134.8 254 65.7
Prupe.5G019900 Prunus persica HOM05D006475 ORTHO05D007969 2.7e-29 133.3 249 63.1
Nn3g19252 Nelumbo nucifera HOM05D006475 ORTHO05D007969 7.8e-29 131.7 256 62.9
Cpa.g.sc137.18 Carica papaya HOM05D006475 ORTHO05D007969 1.3e-28 131.0 256 62.5
MSTRG.1769 Avicennia marina HOM05D006475 ORTHO05D007969 2.3e-28 130.2 248 65.3
Manes.17G003100 Manihot esculenta HOM05D006475 ORTHO05D007969 2.3e-28 130.2 256 62.1
vmacro17427 Vaccinium macrocarpon HOM05D006475 ORTHO05D007969 2.3e-28 130.2 292 59.2
CSS0010448 Camellia sinensis var. sinensis HOM05D006475 ORTHO05D007969 3.0e-28 129.8 255 63.1
Nitab4.5_0006541g0010 Nicotiana tabacum HOM05D006475 ORTHO05D007969 3.9e-28 129.4 252 63.1
Hma1.2p1_0544F.1_g175570 Hydrangea macrophylla HOM05D006475 ORTHO05D007969 5.1e-28 129.0 254 61.8
Lalb_Chr05g0215421 Lupinus albus HOM05D006475 ORTHO05D007969 5.1e-28 129.0 263 62.0
Nitab4.5_0001175g0100 Nicotiana tabacum HOM05D006475 ORTHO05D007969 8.6e-28 128.3 254 61.0
PGR031G1524 Punica granatum HOM05D006475 ORTHO05D007969 8.6e-28 128.3 249 63.9
Phvul.002G128300 Phaseolus vulgaris HOM05D006475 ORTHO05D007969 1.1e-27 127.9 255 63.1
RcHm_v2.0_Chr7g0213461 Rosa chinensis HOM05D006475 ORTHO05D007969 1.1e-27 127.9 251 61.4
DCAR_028235 Daucus carota HOM05D006475 ORTHO05D007969 3.3e-27 126.3 248 63.7
Sopen08g001530 Solanum pennellii HOM05D006475 ORTHO05D007969 3.3e-27 126.3 249 60.2
Duzib187G1769 Durio zibethinus HOM05D006475 ORTHO05D007969 5.6e-27 125.6 246 65.0
Glyma.01G149900 Glycine max HOM05D006475 ORTHO05D007969 5.6e-27 125.6 256 63.3
VMungo1215G2540 Vigna mungo HOM05D006475 ORTHO05D007969 2.1e-26 123.6 251 62.9
FvH4_5g24000 Fragaria vesca HOM05D006475 ORTHO05D007969 6.2e-26 122.1 245 62.0
Cc08_g05010 Coffea canephora HOM05D006475 ORTHO05D007969 8.1e-26 121.7 249 49.8
FAN08G1612 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.4e-25 120.9 245 61.6
Gohir.A05G381700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 1.4e-25 120.9 249 64.7
HanXRQChr08g0226771 Helianthus annuus HOM05D006475 ORTHO05D007969 1.4e-25 120.9 256 62.9
Solyc08g005520.3 Solanum lycopersicum HOM05D006475 ORTHO05D007969 1.4e-25 120.9 249 60.2
FAN18G1960 Fragaria x ananassa HOM05D006475 ORTHO05D007969 1.8e-25 120.6 245 61.6
Glyma.09G214000 Glycine max HOM05D006475 ORTHO05D007969 4.0e-25 119.4 256 62.9
Ca_25099_v3 Cicer arietinum L. HOM05D006475 ORTHO05D007969 5.2e-25 119.0 259 60.2
FAN13G3229 Fragaria x ananassa HOM05D006475 ORTHO05D007969 5.2e-25 119.0 245 60.8
Gorai.012G037900 Gossypium raimondii HOM05D006475 ORTHO05D007969 6.9e-25 118.6 251 64.1
PGSC0003DMG400018460 Solanum tuberosum HOM05D006475 ORTHO05D007969 8.9e-25 118.2 255 58.8
CAN.G320.16 Capsicum annuum HOM05D006475 ORTHO05D007969 1.2e-24 117.9 251 61.4
SalBow8G0939 Salvia bowleyana HOM05D006475 ORTHO05D007969 1.5e-24 117.5 251 62.9
Eucgr.D02591 Eucalyptus grandis HOM05D006475 ORTHO05D007969 2.0e-24 117.1 251 60.6
Peaxi162Scf00045g00636 Petunia axillaris HOM05D006475 ORTHO05D007969 2.0e-24 117.1 248 60.9
Gohir.D04G033600 Gossypium hirsutum HOM05D006475 ORTHO05D007969 4.4e-24 115.9 251 63.3
Lsat_1_v5_gn_6_15221 Lactuca sativa HOM05D006475 ORTHO05D007969 5.8e-24 115.5 252 57.9
BcaC09g51436 Brassica carinata HOM05D006475 ORTHO05D007969 9.9e-24 114.8 247 61.1
BolC1t01287H Brassica oleracea HOM05D006475 ORTHO05D007969 9.9e-24 114.8 247 61.1
A01p11110 Brassica napus HOM05D006475 ORTHO05D007969 2.2e-23 113.6 247 61.1
BraA01t01057Z Brassica rapa HOM05D006475 ORTHO05D007969 2.2e-23 113.6 247 61.1
FAN04G1597 Fragaria x ananassa HOM05D006475 ORTHO05D007969 2.2e-23 113.6 245 60.4
BcaNung04008 Brassica carinata HOM05D006475 ORTHO05D007969 3.8e-23 112.8 87 69.0
arahy.Tifrunner.gnm1.ann1.SLXS5Y Arachis hypogaea HOM05D006475 ORTHO05D007969 1.9e-22 110.5 190 70.5
C01p13140 Brassica napus HOM05D006475 ORTHO05D007969 1.9e-22 110.5 80 70.0
ECA233G2922 Erigeron canadensis HOM05D006475 ORTHO05D007969 1.2e-21 107.8 255 49.4
AL7G34940 Arabidopsis lyrata HOM05D006475 ORTHO05D007969 2.7e-21 106.7 251 58.2
arahy.Tifrunner.gnm1.ann1.0NMX6V Arachis hypogaea HOM05D006475 ORTHO05D007969 2.7e-21 106.7 268 55.2
arahy.Tifrunner.gnm1.ann1.CC5QNU Arachis hypogaea HOM05D006475 ORTHO05D007969 2.7e-21 106.7 268 55.2
Migut.E01351 Erythranthe guttata HOM05D006475 ORTHO05D007969 2.7e-21 106.7 257 60.3
Sp7g17850 Schrenkiella parvula HOM05D006475 ORTHO05D007969 3.5e-21 106.3 251 59.0
Medtr5g026800 Medicago truncatula HOM05D006475 ORTHO05D007969 4.6e-21 105.9 267 57.7
Ciclev10005760m.g Citrus clementina HOM05D006475 ORTHO05D007969 6.0e-21 105.5 253 58.9
SGA_v2.0_scaffold144G35881 Striga asiatica HOM05D006475 ORTHO05D007969 6.0e-21 105.5 251 59.0
Aqoxy7G00886 Aquilegia oxysepala HOM05D006475 ORTHO05D007969 7.8e-21 105.1 275 59.3
HPP92_021118 Vanilla planifolia HOM05D006475 ORTHO05D007969 7.8e-21 105.1 243 60.5
CARHR226020 Cardamine hirsuta HOM05D006475 ORTHO05D007969 1.0e-20 104.8 252 60.3
GSVIVG01022797001 Vitis vinifera HOM05D006475 ORTHO05D007969 1.3e-20 104.4 84 65.5
AT4G19150 Arabidopsis thaliana HOM05D006475 ORTHO05D007969 1.7e-20 104.0 79 68.4
CDE11G0189 Ceratophyllum demersum HOM05D006475 ORTHO05D007969 2.3e-20 103.6 249 57.8
Aa31LG6G1840 Aethionema arabicum HOM05D006475 ORTHO05D007969 3.0e-20 103.2 250 58.8
THA.LOC104812889 Tarenaya hassleriana HOM05D006475 ORTHO05D007969 5.1e-20 102.4 250 59.6
unitig_0.g2207 Utricularia gibba HOM05D006475 ORTHO05D007969 5.1e-20 102.4 80 63.8
arahy.Tifrunner.gnm1.ann1.Y3VSY6 Arachis hypogaea HOM05D006475 ORTHO05D007969 6.6e-20 102.1 184 53.3
Carub.0007s2200 Capsella rubella HOM05D006475 ORTHO05D007969 6.6e-20 102.1 246 59.8
arahy.Tifrunner.gnm1.ann1.17PB5S Arachis hypogaea HOM05D006475 ORTHO05D007969 3.3e-19 99.8 219 62.1
PSO717G0136 Papaver somniferum HOM05D006475 ORTHO05D007969 3.3e-19 99.8 274 56.2
Gohir.D03G018700 Gossypium hirsutum HOM05D006475 ORTHO05D007969 5.6e-19 99.0 82 63.4
CANSAT21G0913 Cannabis sativa HOM05D006475 ORTHO05D007969 1.3e-18 97.8 252 56.3
Thhalv10026017m.g Eutrema salsugineum HOM05D006475 ORTHO05D007969 2.1e-18 97.1 251 58.2
PSO675G8107 Papaver somniferum HOM05D006475 ORTHO05D007969 3.6e-18 96.3 281 55.2
Zm00001eb025510 Zea mays HOM05D006475 ORTHO05D007969 3.6e-18 96.3 245 60.0
TPR.G17268 Trifolium pratense HOM05D006475 ORTHO05D007969 2.4e-17 93.6 80 60.0
TAR375G0514 Trochodendron aralioides HOM05D006475 ORTHO05D007969 4.0e-17 92.8 215 64.2
Dinv28010 Davidia involucrata HOM05D006475 ORTHO05D007969 5.3e-17 92.4 74 62.2
Oeu042209.2 Olea europaea HOM05D006475 ORTHO05D007969 2.2e-15 87.0 369 43.6
Os10g0580700 Oryza sativa ssp. japonica HOM05D006475 ORTHO05D007969 2.9e-15 86.7 249 56.6
QL08p050707 Quercus lobata HOM05D006475 ORTHO05D007969 2.9e-15 86.7 202 66.3
Sc07g0008230 Simmondsia chinensis HOM05D006475 ORTHO05D007969 3.8e-15 86.3 201 64.7
AagrBONN_evm.TU.Sc2ySwM_228.4166 Anthoceros agrestis HOM05D006475 ORTHO05D007969 4.9e-15 85.9 85 51.8
Mapoly0051s0035 Marchantia polymorpha HOM05D006475 ORTHO05D007969 4.2e-14 82.8 79 54.4
arahy.Tifrunner.gnm1.ann1.X7UPX8 Arachis hypogaea HOM05D006475 ORTHO05D007969 4.6e-13 79.3 203 60.6
C03p81780 Brassica napus HOM05D006475 ORTHO05D007969 6.0e-13 79.0 80 55.0
CsaV3_3G040920 Cucumis sativus L. HOM05D006475 ORTHO05D007969 6.0e-13 79.0 262 53.8
FAN18G4370 Fragaria x ananassa HOM05D006475 ORTHO05D007969 3.0e-12 76.6 200 64.5
BolC3t20450H Brassica oleracea HOM05D006475 ORTHO05D007969 5.1e-12 75.9 80 53.8
Psat2g142320 Pisum sativum HOM05D006475 ORTHO05D007969 1.1e-11 74.7 294 48.6
SEGI_07236 Sequoiadendron giganteum HOM05D006475 ORTHO05D007969 2.5e-11 73.6 260 50.8
arahy.Tifrunner.gnm1.ann1.79230D Arachis hypogaea HOM05D006475 ORTHO05D007969 3.3e-11 73.2 184 42.9
Nitab4.5_0001175g0110 Nicotiana tabacum HOM05D006475 ORTHO05D007969 3.3e-11 73.2 207 30.0
Lj2g0004034 Lotus japonicus HOM05D006475 ORTHO05D007969 2.1e-10 70.5 277 52.0
Dinv28011 Davidia involucrata HOM05D006475 ORTHO05D007969 1.8e-09 67.4 104 44.2
Sed0010053 Sechium edule HOM05D006475 ORTHO05D007969 4.0e-09 66.2 272 50.7
ClCG10G015530 Citrullus lanatus HOM05D000058 ORTHO05D000077 2.0e-08 63.9 65 52.3
Pp3c7_14210 Physcomitrium patens HOM05D006475 ORTHO05D007969 2.2e-07 60.5 62 46.8
Nitab4.5_0000532g0060 Nicotiana tabacum HOM05D006475 ORTHO05D007969 8.4e-07 58.5 34 76.5
CBR_g41202 Chara braunii HOM05D006475 ORTHO05D007969 7.1e-06 55.5 56 51.8
Gohir.D08G138080 Gossypium hirsutum HOM05D006475 ORTHO05D007969 7.1e-06 55.5 60 53.3


User provided reference genes

Program Settings