Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund11064 Selenicereus undatus HOM05D000731 ORTHO05D003300 2.3e-84 315.5 155 100.0
Sc01g0006760 Simmondsia chinensis HOM05D000731 ORTHO05D003300 3.5e-16 89.0 144 43.1
CSS0016747 Camellia sinensis var. sinensis HOM05D000731 ORTHO05D003300 1.8e-15 86.7 149 42.3
Sopen09g007010 Solanum pennellii HOM05D000731 ORTHO05D003300 1.1e-14 84.0 116 48.3
Solyc09g013150.4 Solanum lycopersicum HOM05D000731 ORTHO05D003300 2.5e-14 82.8 116 47.4
Potri.016G111000 Populus trichocarpa HOM05D000731 ORTHO05D003300 7.4e-14 81.3 150 41.3
Gohir.A09G163300 Gossypium hirsutum HOM05D000731 ORTHO05D003300 9.7e-14 80.9 104 51.0
Nitab4.5_0000008g0720 Nicotiana tabacum HOM05D000731 ORTHO05D003300 1.3e-13 80.5 141 41.8
Dinv35514 Davidia involucrata HOM05D000731 ORTHO05D003300 1.6e-13 80.1 147 41.5
Nitab4.5_0009193g0020 Nicotiana tabacum HOM05D000731 ORTHO05D003300 1.6e-13 80.1 128 44.5
PGSC0003DMG400020321 Solanum tuberosum HOM05D000731 ORTHO05D003300 1.6e-13 80.1 115 46.1
MSTRG.19030 Avicennia marina HOM05D000731 ORTHO05D003300 2.8e-13 79.3 94 55.3
Gohir.D09G158800 Gossypium hirsutum HOM05D000731 ORTHO05D003300 2.8e-13 79.3 104 50.0
Gorai.006G180500 Gossypium raimondii HOM05D000731 ORTHO05D003300 2.8e-13 79.3 104 50.0
Ca_23719_v3 Cicer arietinum L. HOM05D000731 ORTHO05D003300 6.3e-13 78.2 95 51.6
HanXRQChr15g0463971 Helianthus annuus HOM05D000731 ORTHO05D003300 6.3e-13 78.2 75 58.7
Lsat_1_v5_gn_9_35821 Lactuca sativa HOM05D000731 ORTHO05D003300 6.3e-13 78.2 86 55.8
Lalb_Chr03g0042971 Lupinus albus HOM05D000731 ORTHO05D003300 6.3e-13 78.2 132 44.7
Migut.J00226 Erythranthe guttata HOM05D000731 ORTHO05D003300 8.2e-13 77.8 70 62.9
Rhsim04G0166000 Rhododendron simsii HOM05D000731 ORTHO05D003300 8.2e-13 77.8 147 42.9
Cfa017256 Carpinus fangiana HOM05D000731 ORTHO05D003300 1.1e-12 77.4 115 44.3
TAR633G1827 Trochodendron aralioides HOM05D000731 ORTHO05D003300 1.1e-12 77.4 120 45.0
Medtr7g066780 Medicago truncatula HOM05D000731 ORTHO05D003300 1.4e-12 77.0 92 53.3
Glyma.07G144700 Glycine max HOM05D000731 ORTHO05D003300 1.8e-12 76.6 107 49.5
Lj2A79T38 Lonicera japonica HOM05D000731 ORTHO05D003300 1.8e-12 76.6 94 50.0
CAN.G355.17 Capsicum annuum HOM05D000731 ORTHO05D003300 2.4e-12 76.3 118 44.9
Haze_20949 Corylus avellana HOM05D000731 ORTHO05D003300 2.4e-12 76.3 116 42.2
Peaxi162Scf00141g00812 Petunia axillaris HOM05D000731 ORTHO05D003300 2.4e-12 76.3 115 47.8
FAN09G2468 Fragaria x ananassa HOM05D000731 ORTHO05D003300 3.1e-12 75.9 167 37.7
CiPaw.09G206000 Carya illinoinensis HOM05D000731 ORTHO05D003300 4.1e-12 75.5 83 55.4
Psat3g131520 Pisum sativum HOM05D000731 ORTHO05D003300 4.1e-12 75.5 94 52.1
ClCG10G021830 Citrullus lanatus HOM05D000731 ORTHO05D003300 5.3e-12 75.1 162 40.1
CsaV3_3G034160 Cucumis sativus L. HOM05D000731 ORTHO05D003300 5.3e-12 75.1 159 40.9
TPR.G1541 Trifolium pratense HOM05D000731 ORTHO05D003300 5.3e-12 75.1 139 42.4
Hma1.2p1_0763F.1_g214630 Hydrangea macrophylla HOM05D000731 ORTHO05D003300 6.9e-12 74.7 77 54.5
Actinidia01116 Actinidia chinensis HOM05D000731 ORTHO05D003300 9.0e-12 74.3 82 53.7
arahy.Tifrunner.gnm1.ann1.NSXY15 Arachis hypogaea HOM05D000731 ORTHO05D003300 1.2e-11 73.9 116 44.8
FAN02G0029 Fragaria x ananassa HOM05D000731 ORTHO05D003300 1.2e-11 73.9 162 37.0
Manes.09G102100 Manihot esculenta HOM05D000731 ORTHO05D003300 1.5e-11 73.6 85 54.1
Oeu028728.1 Olea europaea HOM05D000731 ORTHO05D003300 1.5e-11 73.6 75 58.7
Cc06_g01670 Coffea canephora HOM05D000731 ORTHO05D003300 2.0e-11 73.2 47 76.6
MELO3C009192.2 Cucumis melo HOM05D000731 ORTHO05D003300 2.0e-11 73.2 159 40.3
FAN14G3087 Fragaria x ananassa HOM05D000731 ORTHO05D003300 2.6e-11 72.8 162 36.4
Lj1g0014648 Lotus japonicus HOM05D000731 ORTHO05D003300 2.6e-11 72.8 110 46.4
arahy.Tifrunner.gnm1.ann1.MM0VDP Arachis hypogaea HOM05D000731 ORTHO05D003300 3.4e-11 72.4 116 44.0
Ciclev10011514m.g Citrus clementina HOM05D000731 ORTHO05D003300 3.4e-11 72.4 81 54.3
ECA247G2255 Erigeron canadensis HOM05D000731 ORTHO05D003300 3.4e-11 72.4 87 50.6
FvH4_6g12020 Fragaria vesca HOM05D000731 ORTHO05D003300 3.4e-11 72.4 162 36.4
FAN14G2898 Fragaria x ananassa HOM05D000731 ORTHO05D003300 3.4e-11 72.4 162 36.4
CSS0016022 Camellia sinensis var. sinensis HOM05D000731 ORTHO05D003300 4.5e-11 72.0 82 53.7
TWI77G0083 Tripterygium wilfordii HOM05D000731 ORTHO05D003300 4.5e-11 72.0 115 48.7
VMungo1383G2691 Vigna mungo HOM05D000731 ORTHO05D003300 4.5e-11 72.0 95 47.4
Duzib128G1126 Durio zibethinus HOM05D000731 ORTHO05D003300 5.9e-11 71.6 98 48.0
Prupe.6G270700 Prunus persica HOM05D000731 ORTHO05D003300 5.9e-11 71.6 169 36.1
AUR62030402 Chenopodium quinoa HOM05D000731 ORTHO05D003300 7.7e-11 71.2 85 51.8
Phvul.008G108000 Phaseolus vulgaris HOM05D000731 ORTHO05D003300 7.7e-11 71.2 95 48.4
CDE02G2100 Ceratophyllum demersum HOM05D000731 ORTHO05D003300 1.0e-10 70.9 79 53.2
FAN05G1751 Fragaria x ananassa HOM05D000731 ORTHO05D003300 1.0e-10 70.9 84 51.2
HanXRQChr10g0286981 Helianthus annuus HOM05D000731 ORTHO05D003300 1.0e-10 70.9 90 50.0
Os05g0451100 Oryza sativa ssp. japonica HOM05D000731 ORTHO05D003300 1.0e-10 70.9 85 55.3
RcHm_v2.0_Chr3g0463851 Rosa chinensis HOM05D000731 ORTHO05D003300 1.0e-10 70.9 80 53.8
DCAR_018730 Daucus carota HOM05D000731 ORTHO05D003300 1.3e-10 70.5 83 53.0
MBI14_g32942_MAGBIO Magnolia biondii HOM05D000731 ORTHO05D003300 1.3e-10 70.5 77 54.5
PSO339G4093 Papaver somniferum HOM05D000731 ORTHO05D003300 1.7e-10 70.1 122 41.8
Eucgr.B02783 Eucalyptus grandis HOM05D000731 ORTHO05D003300 2.2e-10 69.7 49 71.4
PGR031G2903 Punica granatum HOM05D000731 ORTHO05D003300 2.2e-10 69.7 89 51.7
Sabra16G0107500 Salix brachista HOM05D000731 ORTHO05D003300 2.2e-10 69.7 149 38.9
Zm00001eb288710 Zea mays HOM05D000731 ORTHO05D003300 2.2e-10 69.7 84 52.4
Nn2g11362 Nelumbo nucifera HOM05D000731 ORTHO05D003300 2.9e-10 69.3 139 37.4
Thecc.05G022300 Theobroma cacao HOM05D000731 ORTHO05D003300 2.9e-10 69.3 142 38.0
Atru.chr8.2152 Acer truncatum HOM05D000731 ORTHO05D003300 3.8e-10 68.9 92 46.7
CANSAT35G0962 Cannabis sativa HOM05D000731 ORTHO05D003300 3.8e-10 68.9 101 48.5
AUR62010490 Chenopodium quinoa HOM05D000731 ORTHO05D003300 3.8e-10 68.9 89 51.7
SGA_v2.0_scaffold75G24997 Striga asiatica HOM05D000731 ORTHO05D003300 3.8e-10 68.9 46 76.1
Aqoxy1G00716 Aquilegia oxysepala HOM05D000731 ORTHO05D003300 5.0e-10 68.6 139 38.1
THA.LOC104824522 Tarenaya hassleriana HOM05D000731 ORTHO05D003300 5.0e-10 68.6 125 40.0
Migut.L01993 Erythranthe guttata HOM05D000731 ORTHO05D003300 6.5e-10 68.2 46 73.9
Sed0006811 Sechium edule HOM05D000731 ORTHO05D003300 6.5e-10 68.2 146 39.0
ATR0618G134 Amborella trichopoda HOM05D000731 ORTHO05D003300 8.5e-10 67.8 137 40.9
Cpa.g.sc56.114 Carica papaya HOM05D000731 ORTHO05D003300 8.5e-10 67.8 75 54.7
SGA_v2.0_scaffold85G26764 Striga asiatica HOM05D000731 ORTHO05D003300 1.1e-09 67.4 97 48.5
Ah.02g115800 Amaranthus hybridus HOM05D000731 ORTHO05D003300 1.4e-09 67.0 106 42.5
Thhalv10017818m.g Eutrema salsugineum HOM05D000731 ORTHO05D003300 3.2e-09 65.9 94 47.9
C04p66380 Brassica napus HOM05D000731 ORTHO05D003300 5.5e-09 65.1 53 64.2
CARHR132640 Cardamine hirsuta HOM05D000731 ORTHO05D003300 5.5e-09 65.1 95 46.3
A04p29170 Brassica napus HOM05D000731 ORTHO05D003300 7.2e-09 64.7 47 68.1
BolC4t28143H Brassica oleracea HOM05D000731 ORTHO05D003300 7.2e-09 64.7 47 68.1
BraA04t18386Z Brassica rapa HOM05D000731 ORTHO05D003300 7.2e-09 64.7 47 68.1
BcaC02g12918 Brassica carinata HOM05D000731 ORTHO05D003300 9.4e-09 64.3 93 47.3
HPP92_018188 Vanilla planifolia HOM05D000731 ORTHO05D003300 1.2e-08 63.9 47 68.1
Pp3c12_8070 Physcomitrium patens HOM05D000731 ORTHO05D003300 1.6e-08 63.5 46 63.0
Sp4g20380 Schrenkiella parvula HOM05D000731 ORTHO05D003300 2.1e-08 63.2 70 52.9
AL4G35060 Arabidopsis lyrata HOM05D000731 ORTHO05D003300 2.7e-08 62.8 45 68.9
Aa31LG5G23650 Aethionema arabicum HOM05D000731 ORTHO05D003300 6.1e-08 61.6 45 66.7
AT2G38060 Arabidopsis thaliana HOM05D000731 ORTHO05D003300 6.1e-08 61.6 97 42.3
RcHm_v2.0_Chr5g0068341 Rosa chinensis HOM05D000731 ORTHO05D003300 1.4e-07 60.5 60 51.7
FAN16G0325 Fragaria x ananassa HOM05D000731 ORTHO05D003300 1.8e-07 60.1 60 51.7
FAN25G2477 Fragaria x ananassa HOM05D000731 ORTHO05D003300 1.8e-07 60.1 60 51.7
FvH4_3g37920 Fragaria vesca HOM05D000731 ORTHO05D003300 2.3e-07 59.7 144 36.1
PSO339G2287 Papaver somniferum HOM05D000731 ORTHO05D003300 2.3e-07 59.7 60 53.3
PSO384G0834 Papaver somniferum HOM05D000731 ORTHO05D003300 2.3e-07 59.7 60 53.3
EL10Ac5g12594 Beta vulgaris HOM05D000731 ORTHO05D000001 3.0e-07 59.3 44 68.2
Carub.0004s2003 Capsella rubella HOM05D000731 ORTHO05D003300 3.0e-07 59.3 87 47.1
FAN21G3147 Fragaria x ananassa HOM05D001455 ORTHO05D001587 3.0e-07 59.3 144 36.1
unitig_0.g443 Utricularia gibba HOM05D000731 ORTHO05D003300 3.0e-07 59.3 54 51.9
QL01p027237 Quercus lobata HOM05D000731 ORTHO05D003300 3.9e-07 58.9 141 31.9
THA.LOC104810733 Tarenaya hassleriana HOM05D000731 ORTHO05D003300 3.9e-07 58.9 46 60.9
Atru.chr3.4066 Acer truncatum HOM05D000731 ORTHO05D003300 5.1e-07 58.5 61 50.8
Duzib168G0038 Durio zibethinus HOM05D000731 ORTHO05D003300 5.1e-07 58.5 46 58.7
FAN11G2513 Fragaria x ananassa HOM05D000731 ORTHO05D003300 5.1e-07 58.5 144 35.4
Lsat_1_v5_gn_2_10961 Lactuca sativa HOM05D000731 ORTHO05D003300 5.1e-07 58.5 46 60.9
HPP92_018189 Vanilla planifolia HOM05D000731 ORTHO05D003300 5.1e-07 58.5 46 58.7
Actinidia05345 Actinidia chinensis HOM05D000731 ORTHO05D003300 6.7e-07 58.2 37 73.0
Aqoxy1G00715 Aquilegia oxysepala HOM05D000731 ORTHO05D003300 6.7e-07 58.2 46 60.9
COL.COLO4_19093 Corchorus olitorius HOM05D000731 ORTHO05D003300 6.7e-07 58.2 46 60.9
ECA247G3872 Erigeron canadensis HOM05D000731 ORTHO05D003300 6.7e-07 58.2 46 60.9
Thecc.09G306900 Theobroma cacao HOM05D000731 ORTHO05D003300 6.7e-07 58.2 46 60.9
SEGI_17923 Sequoiadendron giganteum HOM05D000731 ORTHO05D003300 8.8e-07 57.8 59 49.2
GSVIVG01034012001 Vitis vinifera HOM05D000731 ORTHO05D003300 8.8e-07 57.8 34 76.5
CiPaw.13G082200 Carya illinoinensis HOM05D000731 ORTHO05D003300 1.1e-06 57.4 46 60.9
Gohir.A03G048600 Gossypium hirsutum HOM05D000731 ORTHO05D003300 1.1e-06 57.4 46 60.9
Gohir.D03G118500 Gossypium hirsutum HOM05D000731 ORTHO05D003300 1.1e-06 57.4 46 60.9
Gorai.003G124900 Gossypium raimondii HOM05D000731 ORTHO05D003300 1.1e-06 57.4 46 60.9
PGR102G2533 Punica granatum HOM05D000731 ORTHO05D003300 1.1e-06 57.4 46 56.5
Ciclev10028197m.g Citrus clementina HOM05D000731 ORTHO05D003300 1.5e-06 57.0 46 58.7
Duzib150G0662 Durio zibethinus HOM05D000731 ORTHO05D003300 1.5e-06 57.0 46 58.7
HanXRQChr08g0237231 Helianthus annuus HOM05D000731 ORTHO05D003300 1.5e-06 57.0 46 56.5
Manes.02G123400 Manihot esculenta HOM05D000731 ORTHO05D003300 1.5e-06 57.0 139 30.9
Eucgr.J01945 Eucalyptus grandis HOM05D000731 ORTHO05D003300 2.0e-06 56.6 60 50.0
Potri.001G248200 Populus trichocarpa HOM05D000731 ORTHO05D003300 2.0e-06 56.6 46 56.5
COL.COLO4_14597 Corchorus olitorius HOM05D000731 ORTHO05D003300 2.5e-06 56.2 61 57.4
Migut.N00816 Erythranthe guttata HOM05D000731 ORTHO05D003300 2.5e-06 56.2 59 50.8
Peaxi162Scf00454g00326 Petunia axillaris HOM05D000731 ORTHO05D003300 2.5e-06 56.2 46 56.5
Prupe.6G062400 Prunus persica HOM05D000731 ORTHO05D003300 2.5e-06 56.2 58 50.0
Sed0026363 Sechium edule HOM05D000731 ORTHO05D003300 3.3e-06 55.8 46 58.7
Sc12g0000980 Simmondsia chinensis HOM05D000731 ORTHO05D003300 3.3e-06 55.8 146 32.2
CSS0020471 Camellia sinensis var. sinensis HOM05D000731 ORTHO05D003300 4.3e-06 55.5 46 54.3
CSS0041452 Camellia sinensis var. sinensis HOM05D000731 ORTHO05D003300 4.3e-06 55.5 46 54.3
CANSAT78G0663 Cannabis sativa HOM05D000731 ORTHO05D003300 4.3e-06 55.5 59 47.5
Ca_05577_v3 Cicer arietinum L. HOM05D000731 ORTHO05D003300 4.3e-06 55.5 46 58.7
MELO3C020576.2 Cucumis melo HOM05D000731 ORTHO05D003300 4.3e-06 55.5 46 58.7
CsaV3_1G035940 Cucumis sativus L. HOM05D000731 ORTHO05D003300 4.3e-06 55.5 46 58.7
Thhalv10010272m.g Eutrema salsugineum HOM05D000731 ORTHO05D003300 4.3e-06 55.5 64 48.4
Oeu035010.1 Olea europaea HOM05D000731 ORTHO05D003300 4.3e-06 55.5 46 56.5
Solyc09g031700.4 Solanum lycopersicum HOM05D000731 ORTHO05D003300 4.3e-06 55.5 46 56.5
Sopen09g014650 Solanum pennellii HOM05D000731 ORTHO05D003300 4.3e-06 55.5 46 56.5
Glyma.02G224001 Glycine max HOM05D000731 ORTHO05D003300 5.7e-06 55.1 46 56.5
Glyma.14G190900 Glycine max HOM05D000731 ORTHO05D003300 5.7e-06 55.1 46 56.5
Lalb_Chr10g0103201 Lupinus albus HOM05D000731 ORTHO05D003300 5.7e-06 55.1 46 58.7
MD11G1082000 Malus domestica HOM05D000731 ORTHO05D003300 5.7e-06 55.1 58 50.0
Rhsim13G0073600 Rhododendron simsii HOM05D000731 ORTHO05D003300 5.7e-06 55.1 46 54.3
vmacro02995 Vaccinium macrocarpon HOM05D000731 ORTHO05D003300 5.7e-06 55.1 46 54.3
Aa31LG4G15930 Aethionema arabicum HOM05D000731 ORTHO05D003300 7.4e-06 54.7 46 58.7
arahy.Tifrunner.gnm1.ann1.400VR1 Arachis hypogaea HOM05D000731 ORTHO05D003300 7.4e-06 54.7 46 54.3
arahy.Tifrunner.gnm1.ann1.N9GP2K Arachis hypogaea HOM05D000731 ORTHO05D003300 7.4e-06 54.7 46 54.3
A06p20580 Brassica napus HOM05D001455 ORTHO05D001587 7.4e-06 54.7 56 51.8
C03p71160 Brassica napus HOM05D001455 ORTHO05D001587 7.4e-06 54.7 56 51.8
BolC3t19402H Brassica oleracea HOM05D000731 ORTHO05D003300 7.4e-06 54.7 56 51.8
BraA06t25135Z Brassica rapa HOM05D000731 ORTHO05D003300 7.4e-06 54.7 56 51.8
Carub.0005s1320 Capsella rubella HOM05D000731 ORTHO05D003300 7.4e-06 54.7 46 58.7
Zm00001eb147760 Zea mays HOM05D000731 ORTHO05D003300 7.4e-06 54.7 64 40.6
ATR0618G021 Amborella trichopoda HOM05D000731 ORTHO05D003300 9.7e-06 54.3 114 35.1
AT3G46980 Arabidopsis thaliana HOM05D000731 ORTHO05D003300 9.7e-06 54.3 65 49.2
CAN.G214.1 Capsicum annuum HOM05D000731 ORTHO05D003300 9.7e-06 54.3 140 32.9
CARHR155620 Cardamine hirsuta HOM05D000731 ORTHO05D003300 9.7e-06 54.3 56 51.8
Cfa011639 Carpinus fangiana HOM05D000731 ORTHO05D003300 9.7e-06 54.3 46 58.7
AUR62020084 Chenopodium quinoa HOM05D000731 ORTHO05D003300 9.7e-06 54.3 60 46.7
ClCG03G001000 Citrullus lanatus HOM05D000731 ORTHO05D003300 9.7e-06 54.3 46 58.7
Hma1.2p1_0543F.1_g175210 Hydrangea macrophylla HOM05D000731 ORTHO05D003300 9.7e-06 54.3 46 54.3
Hma1.2p1_3368F.1_g335620 Hydrangea macrophylla HOM05D000731 ORTHO05D003300 9.7e-06 54.3 46 54.3
Sp5g14740 Schrenkiella parvula HOM05D000731 ORTHO05D003300 9.7e-06 54.3 56 51.8


User provided reference genes

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