Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund11009 Selenicereus undatus HOM05D007481 ORTHO05D009444 1.3e-151 539.7 262 100.0
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 1.2e-88 330.5 278 60.8
MD04G1152000 Malus domestica HOM05D007481 ORTHO05D009444 6.5e-87 324.7 271 62.7
Sc07g0006570 Simmondsia chinensis HOM05D007481 ORTHO05D009444 3.2e-86 322.4 265 63.0
Prupe.6G277100 Prunus persica HOM05D007481 ORTHO05D009444 7.2e-86 321.2 268 61.9
Gohir.D09G160700 Gossypium hirsutum HOM05D007481 ORTHO05D009444 2.7e-85 319.3 277 61.4
RcHm_v2.0_Chr3g0463171 Rosa chinensis HOM05D007481 ORTHO05D009444 2.7e-85 319.3 270 61.5
Manes.09G104600 Manihot esculenta HOM05D007481 ORTHO05D009444 4.7e-85 318.5 266 63.9
Eucgr.B02817 Eucalyptus grandis HOM05D007481 ORTHO05D009444 1.8e-84 316.6 272 59.6
CSS0016102 Camellia sinensis var. sinensis HOM05D007481 ORTHO05D009444 3.9e-84 315.5 271 60.1
FAN05G5358 Fragaria x ananassa HOM05D007481 ORTHO05D009444 3.9e-84 315.5 270 61.1
Peaxi162Scf00009g01813 Petunia axillaris HOM05D007481 ORTHO05D009444 3.9e-84 315.5 268 60.8
PGSC0003DMG400011097 Solanum tuberosum HOM05D007481 ORTHO05D009444 5.1e-84 315.1 268 59.7
Actinidia11588 Actinidia chinensis HOM05D007481 ORTHO05D009444 8.8e-84 314.3 271 60.1
Cc06_g01380 Coffea canephora HOM05D007481 ORTHO05D009444 8.8e-84 314.3 271 60.1
Solyc10g085160.2 Solanum lycopersicum HOM05D007481 ORTHO05D009444 8.8e-84 314.3 268 60.4
Thecc.05G016400 Theobroma cacao HOM05D007481 ORTHO05D009444 8.8e-84 314.3 275 58.5
Aa31LG1G23100 Aethionema arabicum HOM05D007481 ORTHO05D009444 1.1e-83 313.9 270 60.7
CANSAT35G1044 Cannabis sativa HOM05D007481 ORTHO05D009444 1.1e-83 313.9 271 59.8
Potri.006G100100 Populus trichocarpa HOM05D007481 ORTHO05D009444 2.0e-83 313.2 267 60.3
Nn2g13707 Nelumbo nucifera HOM05D007481 ORTHO05D009444 2.6e-83 312.8 271 59.4
GSVIVG01033961001 Vitis vinifera HOM05D007481 ORTHO05D009444 2.6e-83 312.8 276 58.3
Sopen10g034630 Solanum pennellii HOM05D007481 ORTHO05D009444 4.4e-83 312.0 268 60.1
COL.COLO4_14539 Corchorus olitorius HOM05D007481 ORTHO05D009444 5.7e-83 311.6 275 59.6
AT5G01470 Arabidopsis thaliana HOM05D007481 ORTHO05D009444 7.4e-83 311.2 265 60.0
FAN02G0465 Fragaria x ananassa HOM05D007481 ORTHO05D009444 9.7e-83 310.8 277 58.8
Nitab4.5_0003666g0020 Nicotiana tabacum HOM05D007481 ORTHO05D009444 9.7e-83 310.8 267 59.6
Dinv04699 Davidia involucrata HOM05D007481 ORTHO05D009444 1.3e-82 310.5 271 59.8
Sed0020862 Sechium edule HOM05D007481 ORTHO05D009444 1.7e-82 310.1 268 60.1
QL07p035708 Quercus lobata HOM05D007481 ORTHO05D009444 2.2e-82 309.7 266 59.8
CAN.G616.2 Capsicum annuum HOM05D007481 ORTHO05D009444 2.8e-82 309.3 268 58.6
ECA248G3524 Erigeron canadensis HOM05D007481 ORTHO05D009444 2.8e-82 309.3 262 60.7
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 3.7e-82 308.9 264 60.6
THA.LOC104816191 Tarenaya hassleriana HOM05D007481 ORTHO05D009444 3.7e-82 308.9 268 59.0
AL6G10600 Arabidopsis lyrata HOM05D007481 ORTHO05D009444 4.8e-82 308.5 269 58.7
PGR031G3607 Punica granatum HOM05D007481 ORTHO05D009444 6.3e-82 308.1 267 58.1
BcaC03g13078 Brassica carinata HOM05D007481 ORTHO05D009444 8.2e-82 307.8 269 59.9
Carub.0006s0036 Capsella rubella HOM05D007481 ORTHO05D009444 8.2e-82 307.8 269 59.1
C02p00150 Brassica napus HOM05D007481 ORTHO05D009444 1.4e-81 307.0 270 59.3
CiPaw.10G156500 Carya illinoinensis HOM05D007481 ORTHO05D009444 3.1e-81 305.8 267 60.3
Ciclev10012584m.g Citrus clementina HOM05D007481 ORTHO05D009444 3.1e-81 305.8 268 59.0
Gorai.006G182400 Gossypium raimondii HOM05D007481 ORTHO05D009444 3.1e-81 305.8 312 54.5
TWI74G0365 Tripterygium wilfordii HOM05D007481 ORTHO05D009444 3.1e-81 305.8 268 59.0
CARHR211840 Cardamine hirsuta HOM05D007481 ORTHO05D009444 4.1e-81 305.4 268 58.2
Sp6g40760 Schrenkiella parvula HOM05D007481 ORTHO05D009444 5.3e-81 305.1 269 58.4
BolC2t06012H Brassica oleracea HOM05D007481 ORTHO05D009444 7.0e-81 304.7 270 58.9
HanXRQChr01g0007111 Helianthus annuus HOM05D007481 ORTHO05D009444 7.0e-81 304.7 265 61.9
FAN09G2325 Fragaria x ananassa HOM05D007481 ORTHO05D009444 1.2e-80 303.9 257 61.1
Thhalv10014504m.g Eutrema salsugineum HOM05D007481 ORTHO05D009444 1.5e-80 303.5 268 59.3
BraA02t04685Z Brassica rapa HOM05D007481 ORTHO05D009444 2.6e-80 302.8 270 58.5
Migut.L02012 Erythranthe guttata HOM05D007481 ORTHO05D009444 3.5e-80 302.4 266 59.0
BcaB05g21923 Brassica carinata HOM05D007481 ORTHO05D009444 4.5e-80 302.0 266 59.0
Cfa017210 Carpinus fangiana HOM05D007481 ORTHO05D009444 4.5e-80 302.0 248 61.7
Lj3g0018029 Lotus japonicus HOM05D007481 ORTHO05D009444 1.0e-79 300.8 265 59.2
CsaV3_4G026270 Cucumis sativus L. HOM05D007481 ORTHO05D009444 1.3e-79 300.4 262 58.8
Nitab4.5_0003024g0060 Nicotiana tabacum HOM05D007481 ORTHO05D009444 1.3e-79 300.4 281 56.2
MSTRG.10219 Avicennia marina HOM05D007481 ORTHO05D009444 2.9e-79 299.3 274 56.6
Glyma.03G058200 Glycine max HOM05D007481 ORTHO05D009444 2.9e-79 299.3 270 57.8
ClCG04G007010 Citrullus lanatus HOM05D007481 ORTHO05D009444 5.0e-79 298.5 269 58.4
Psat7g244960 Pisum sativum HOM05D007481 ORTHO05D009444 5.0e-79 298.5 275 57.1
Lalb_Chr07g0193571 Lupinus albus HOM05D007481 ORTHO05D009444 1.4e-78 297.0 272 57.0
Phvul.010G001400 Phaseolus vulgaris HOM05D007481 ORTHO05D009444 1.9e-78 296.6 270 56.7
Medtr4g012440 Medicago truncatula HOM05D007481 ORTHO05D009444 4.2e-78 295.4 275 56.4
vmacro20262 Vaccinium macrocarpon HOM05D007481 ORTHO05D009444 4.2e-78 295.4 262 60.7
arahy.Tifrunner.gnm1.ann1.7RHW31 Arachis hypogaea HOM05D007481 ORTHO05D009444 9.4e-78 294.3 271 58.3
Ca_20231_v3 Cicer arietinum L. HOM05D007481 ORTHO05D009444 1.2e-77 293.9 268 57.5
Sabra06G0076900 Salix brachista HOM05D007481 ORTHO05D009444 1.2e-77 293.9 267 57.3
TPR.G13336 Trifolium pratense HOM05D007481 ORTHO05D009444 1.0e-76 290.8 277 56.0
unitig_736.g22787 Utricularia gibba HOM05D007481 ORTHO05D009444 3.0e-76 289.3 268 57.1
PSO801G0715 Papaver somniferum HOM05D007481 ORTHO05D009444 3.9e-76 288.9 276 51.8
FAN14G0098 Fragaria x ananassa HOM05D007481 ORTHO05D009444 1.1e-75 287.3 330 49.4
PSO339G5056 Papaver somniferum HOM05D007481 ORTHO05D009444 5.7e-75 285.0 263 54.8
Aqoxy2G00902 Aquilegia oxysepala HOM05D007481 ORTHO05D009444 1.7e-74 283.5 269 53.9
Lj3A953G52 Lonicera japonica HOM05D007481 ORTHO05D009444 4.8e-74 282.0 253 58.5
arahy.Tifrunner.gnm1.ann1.6XTR6T Arachis hypogaea HOM05D007481 ORTHO05D009444 6.3e-74 281.6 266 56.8
Lsat_1_v5_gn_5_149561 Lactuca sativa HOM05D007481 ORTHO05D009444 1.8e-73 280.0 252 56.0
Duzib093G0021 Durio zibethinus HOM05D007481 ORTHO05D009444 2.4e-73 279.6 232 60.8
ATR0618G339 Amborella trichopoda HOM05D007481 ORTHO05D009444 2.1e-69 266.5 264 51.5
Rhsim05G0214800 Rhododendron simsii HOM05D007481 ORTHO05D009444 2.0e-67 260.0 332 47.0
SEGI_08492 Sequoiadendron giganteum HOM05D007481 ORTHO05D009444 1.3e-66 257.3 309 47.2
Os03g0826700 Oryza sativa ssp. japonica HOM05D007481 ORTHO05D009444 2.2e-66 256.5 273 52.0
FvH4_6g11480 Fragaria vesca HOM05D007481 ORTHO05D009444 3.8e-63 245.7 219 58.0
TAR633G1799 Trochodendron aralioides HOM05D007481 ORTHO05D009444 3.2e-62 242.7 260 50.8
Gohir.A09G165100 Gossypium hirsutum HOM05D007481 ORTHO05D009444 1.2e-61 240.7 204 61.3
Zm00001eb063270 Zea mays HOM05D007481 ORTHO05D009444 2.7e-61 239.6 287 46.3
Mapoly0103s0024 Marchantia polymorpha HOM05D007481 ORTHO05D009444 1.2e-59 234.2 292 46.9
SalBow4G1731 Salvia bowleyana HOM05D007481 ORTHO05D009444 3.4e-59 232.6 220 56.8
Cpa.g.sc11.154 Carica papaya HOM05D007481 ORTHO05D009444 1.8e-57 226.9 262 49.2
Pp3c17_21930 Physcomitrium patens HOM05D007481 ORTHO05D009444 2.4e-57 226.5 294 44.2
Haze_20985 Corylus avellana HOM05D007481 ORTHO05D009444 4.1e-57 225.7 276 48.2
MELO3C003292.2 Cucumis melo HOM05D007481 ORTHO05D009444 7.0e-57 224.9 200 58.5
SMO119G0350 Selaginella moellendorffii HOM05D007481 ORTHO05D009444 1.2e-56 224.2 231 51.9
CBR_g4113 Chara braunii HOM05D007481 ORTHO05D009444 1.6e-56 223.8 308 42.5
CDE02G3625 Ceratophyllum demersum HOM05D007481 ORTHO05D009444 5.5e-54 215.3 202 56.9
MBI14_g30737_MAGBIO Magnolia biondii HOM05D007481 ORTHO05D009444 1.6e-53 213.8 269 46.5
AagrBONN_evm.TU.Sc2ySwM_228.1780 Anthoceros agrestis HOM05D007481 ORTHO05D009444 3.6e-53 212.6 238 49.2
FAN14G2270 Fragaria x ananassa HOM05D000872 ORTHO05D000777 8.9e-52 208.0 311 42.4
DCAR_015418 Daucus carota HOM05D007481 ORTHO05D009444 5.8e-43 178.7 136 65.4
Atru.chr8.2241 Acer truncatum HOM05D007481 ORTHO05D009444 8.6e-39 164.9 142 59.2
VMungo0331G0457 Vigna mungo HOM05D007481 ORTHO05D009444 1.1e-38 164.5 133 61.7
HPP92_003771 Vanilla planifolia HOM05D007481 ORTHO05D009444 1.5e-35 154.1 215 43.3
EL10Ac5g12562 Beta vulgaris HOM05D007481 ORTHO05D009444 2.4e-25 120.2 71 80.3
Eucgr.B02818 Eucalyptus grandis HOM05D007481 ORTHO05D009444 1.1e-22 111.3 89 60.7
Oeu006297.1 Olea europaea HOM05D007481 ORTHO05D009444 3.1e-20 103.2 72 72.2
AUR62030437 Chenopodium quinoa HOM05D007481 ORTHO05D009444 7.3e-14 82.0 40 87.5


User provided reference genes

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