Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund11000 Selenicereus undatus HOM05D046068 ORTHO05D003520 4.2e-181 637.9 320 100.0
Hund29902 Selenicereus undatus HOM05D046068 ORTHO05D003520 1.1e-165 586.6 320 95.0
EL10Ac5g12551 Beta vulgaris HOM05D029928 ORTHO05D003520 6.0e-18 95.9 315 32.7
AUR62030799 Chenopodium quinoa HOM05D029928 ORTHO05D003520 2.6e-13 80.5 226 34.1
PGSC0003DMG400030244 Solanum tuberosum HOM05D003726 ORTHO05D003520 4.2e-11 73.2 196 32.7
TWI53G1918 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 5.4e-11 72.8 249 30.1
SGA_v2.0_scaffold110G31210 Striga asiatica HOM05D003726 ORTHO05D003520 9.3e-11 72.0 210 32.4
Actinidia05361 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.3e-09 68.2 213 32.9
Solyc09g005570.3 Solanum lycopersicum HOM05D003726 ORTHO05D003520 1.3e-09 68.2 283 29.7
Sopen09g001480 Solanum pennellii HOM05D003726 ORTHO05D003520 1.3e-09 68.2 283 29.7
Actinidia11576 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.7e-09 67.8 295 27.5
TWI74G0063 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 2.3e-09 67.4 259 28.6
Nn2g10861 Nelumbo nucifera HOM05D003726 ORTHO05D003520 3.0e-09 67.0 170 35.9
Peaxi162Scf00170g00213 Petunia axillaris HOM05D003726 ORTHO05D003520 5.1e-09 66.2 127 37.8
Sed0008005 Sechium edule HOM05D003726 ORTHO05D003520 5.1e-09 66.2 129 35.7
FAN09G2526 Fragaria x ananassa HOM05D003726 ORTHO05D003520 6.6e-09 65.9 178 31.5
Potri.009G046900 Populus trichocarpa HOM05D003726 ORTHO05D003520 6.6e-09 65.9 183 34.4
SalBow4G2563 Salvia bowleyana HOM05D003726 ORTHO05D003520 8.7e-09 65.5 137 34.3
Hund14289 Selenicereus undatus HOM05D029928 ORTHO05D003520 8.7e-09 65.5 303 29.7
Sabra09G0034300 Salix brachista HOM05D003726 ORTHO05D003520 1.1e-08 65.1 207 33.8
Cpa.g.sc112.4 Carica papaya HOM05D003726 ORTHO05D003520 1.5e-08 64.7 179 32.4
VMungo0331G0804 Vigna mungo HOM05D003726 ORTHO05D003520 1.9e-08 64.3 242 29.8
Haze_24339 Corylus avellana HOM05D003726 ORTHO05D003520 3.3e-08 63.5 192 34.9
FAN14G0787 Fragaria x ananassa HOM05D003726 ORTHO05D003520 3.3e-08 63.5 174 31.6
Lsat_1_v5_gn_5_149441 Lactuca sativa HOM05D003726 ORTHO05D003520 3.3e-08 63.5 247 29.1
Phvul.010G076500 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 3.3e-08 63.5 243 29.2
Duzib128G0808 Durio zibethinus HOM05D003726 ORTHO05D003520 4.3e-08 63.2 224 29.5
CSS0024143 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 5.6e-08 62.8 210 33.8
CSS0035019 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 5.6e-08 62.8 210 33.8
QL07p035285 Quercus lobata HOM05D003726 ORTHO05D003520 5.6e-08 62.8 211 32.2
GSVIVG01011170001 Vitis vinifera HOM05D003726 ORTHO05D003520 5.6e-08 62.8 342 28.9
Migut.L02021 Erythranthe guttata HOM05D003726 ORTHO05D003520 7.3e-08 62.4 247 29.1
Prupe.6G278700 Prunus persica HOM05D003726 ORTHO05D003520 7.3e-08 62.4 178 32.0
Dinv14505 Davidia involucrata HOM05D003726 ORTHO05D003520 9.6e-08 62.0 177 29.9
FAN02G2870 Fragaria x ananassa HOM05D003726 ORTHO05D003520 9.6e-08 62.0 182 30.8
Glyma.01G120800 Glycine max HOM05D003726 ORTHO05D003520 1.6e-07 61.2 135 35.6
MSTRG.26816 Avicennia marina HOM05D003726 ORTHO05D003520 2.8e-07 60.5 201 31.8
AUR62030496 Chenopodium quinoa HOM05D029928 ORTHO05D003520 2.8e-07 60.5 272 29.4
MELO3C009159.2 Cucumis melo HOM05D003726 ORTHO05D003520 2.8e-07 60.5 224 31.2
FvH4_6g11320 Fragaria vesca HOM05D003726 ORTHO05D003520 2.8e-07 60.5 163 31.3
FAN14G4204 Fragaria x ananassa HOM05D003726 ORTHO05D003520 2.8e-07 60.5 163 31.3
MD04G1154900 Malus domestica HOM05D003726 ORTHO05D003520 2.8e-07 60.5 207 30.9
QL01p038574 Quercus lobata HOM05D003726 ORTHO05D003520 2.8e-07 60.5 179 33.5
arahy.Tifrunner.gnm1.ann1.3NQ7J1 Arachis hypogaea HOM05D003726 ORTHO05D003520 3.6e-07 60.1 133 33.1
arahy.Tifrunner.gnm1.ann1.DIZ6KI Arachis hypogaea HOM05D003726 ORTHO05D003520 3.6e-07 60.1 133 33.1
Eucgr.A00522 Eucalyptus grandis HOM05D003726 ORTHO05D003520 6.2e-07 59.3 136 36.0
Nitab4.5_0000261g0020 Nicotiana tabacum HOM05D003726 ORTHO05D003520 6.2e-07 59.3 251 25.9
Nitab4.5_0002020g0040 Nicotiana tabacum HOM05D003726 ORTHO05D003520 6.2e-07 59.3 266 27.4
ClCG10G022200 Citrullus lanatus HOM05D003726 ORTHO05D003520 8.1e-07 58.9 134 35.1
Sc07g0006660 Simmondsia chinensis HOM05D003726 ORTHO05D003520 8.1e-07 58.9 292 29.8
CiPaw.14G058500 Carya illinoinensis HOM05D003726 ORTHO05D003520 1.1e-06 58.5 183 30.6
COL.COLO4_19173 Corchorus olitorius HOM05D003726 ORTHO05D003520 1.1e-06 58.5 187 28.9
Medtr4g015650 Medicago truncatula HOM05D003726 ORTHO05D003520 1.1e-06 58.5 202 31.2
Gorai.009G091100 Gossypium raimondii HOM05D003726 ORTHO05D003520 1.4e-06 58.2 232 29.3
Ciclev10011806m.g Citrus clementina HOM05D003726 ORTHO05D003520 1.8e-06 57.8 235 28.9
Cfa011708 Carpinus fangiana HOM05D003726 ORTHO05D003520 3.1e-06 57.0 230 30.9
CiPaw.13G076400 Carya illinoinensis HOM05D003726 ORTHO05D003520 4.0e-06 56.6 185 32.4
FAN21G3554 Fragaria x ananassa HOM05D003726 ORTHO05D003520 4.0e-06 56.6 283 31.1
Glyma.03G056800 Glycine max HOM05D003726 ORTHO05D003520 4.0e-06 56.6 325 25.8
Peaxi162Scf79720g00003 Petunia axillaris HOM05D003726 ORTHO05D003520 4.0e-06 56.6 319 26.6
COL.COLO4_14518 Corchorus olitorius HOM05D003726 ORTHO05D003520 6.9e-06 55.8 264 27.3
Gohir.D05G088900 Gossypium hirsutum HOM05D003726 ORTHO05D003520 6.9e-06 55.8 232 29.3


User provided reference genes

Program Settings