Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 0.0e+00 1117.8 526 100.0
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 1.5e-236 822.8 505 74.5
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 4.2e-226 788.1 498 74.1
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 2.7e-217 758.8 508 70.1
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 8.7e-216 753.8 500 70.8
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.1e-215 753.4 507 69.8
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 5.6e-215 751.1 504 70.2
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 8.1e-214 747.3 509 69.4
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 8.1e-214 747.3 509 69.4
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 3.1e-213 745.3 491 71.9
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 6.9e-213 744.2 507 69.0
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 2.6e-212 742.3 509 68.6
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 3.4e-212 741.9 507 68.8
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.1e-210 736.9 507 68.4
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 4.6e-209 731.5 489 69.7
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 6.0e-209 731.1 503 67.4
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 6.0e-209 731.1 497 68.2
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 1.8e-208 729.6 505 68.3
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 2.3e-208 729.2 493 68.2
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 6.7e-208 727.6 508 68.1
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 9.6e-207 723.8 512 67.6
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 1.3e-206 723.4 505 66.9
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 1.6e-206 723.0 507 66.1
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 2.1e-206 722.6 507 67.5
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 2.8e-206 722.2 506 67.2
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 2.8e-206 722.2 498 67.1
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 3.7e-206 721.8 505 66.7
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 3.7e-206 721.8 505 66.7
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 3.7e-206 721.8 510 66.7
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 6.2e-206 721.1 514 66.7
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 8.2e-206 720.7 486 70.0
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 8.2e-206 720.7 509 67.0
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 1.1e-205 720.3 490 68.0
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 1.1e-205 720.3 507 65.9
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 1.8e-205 719.5 513 66.7
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 6.9e-205 717.6 498 66.9
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 9.0e-205 717.2 506 66.8
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 3.4e-204 715.3 511 65.4
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 3.4e-204 715.3 510 65.9
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 7.6e-204 714.1 500 66.0
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 1.3e-203 713.4 507 66.7
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.7e-203 713.0 517 65.4
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 2.9e-203 712.2 503 67.0
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 2.9e-203 712.2 524 65.1
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 5.0e-203 711.4 517 65.2
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 6.5e-203 711.1 510 65.9
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 8.4e-203 710.7 490 67.1
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 1.1e-202 710.3 498 65.5
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 1.4e-202 709.9 501 65.9
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 1.9e-202 709.5 497 66.8
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 2.5e-202 709.1 511 64.8
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 3.2e-202 708.8 501 66.3
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 3.2e-202 708.8 504 66.7
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 4.2e-202 708.4 476 67.4
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 5.5e-202 708.0 534 64.0
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 9.3e-202 707.2 506 64.8
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 1.2e-201 706.8 504 65.1
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 1.6e-201 706.4 506 65.6
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 2.1e-201 706.1 505 66.3
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 2.7e-201 705.7 503 65.6
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 4.6e-201 704.9 510 66.3
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 4.6e-201 704.9 510 66.3
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 6.1e-201 704.5 499 66.5
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 1.3e-200 703.4 499 66.3
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 3.0e-200 702.2 507 65.7
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 6.7e-200 701.0 506 63.0
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 6.7e-200 701.0 455 71.9
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 8.7e-200 700.7 506 63.0
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 8.7e-200 700.7 489 68.3
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 1.1e-199 700.3 521 64.5
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 3.7e-198 695.3 514 63.6
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 4.8e-198 694.9 509 64.8
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 6.3e-198 694.5 505 63.0
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 6.3e-198 694.5 507 65.3
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 2.4e-197 692.6 505 63.0
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 2.4e-197 692.6 505 63.0
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 3.1e-197 692.2 505 65.3
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 3.1e-197 692.2 509 64.4
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 4.1e-197 691.8 503 65.8
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 9.0e-197 690.6 514 64.0
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 5.9e-196 688.0 568 58.5
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 1.1e-194 683.7 517 62.9
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 6.1e-193 677.9 518 61.8
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 1.0e-192 677.2 495 64.4
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 2.3e-192 676.0 530 61.5
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 8.8e-192 674.1 522 61.1
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 2.5e-191 672.5 530 60.8
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 3.7e-190 668.7 501 63.3
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 3.8e-187 658.7 521 61.0
DCAR_018674 Daucus carota HOM05D006476 ORTHO05D008178 4.7e-185 651.7 455 67.9
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 3.3e-183 645.6 492 62.2
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 1.2e-177 627.1 517 58.2
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 8.0e-177 624.4 431 68.0
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 2.3e-176 622.9 512 59.4
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 9.7e-175 617.5 504 58.7
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 5.3e-173 611.7 353 78.2
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 3.8e-171 605.5 469 60.8
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 2.7e-169 599.4 504 57.7
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 4.0e-168 595.5 502 59.4
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 4.8e-166 588.6 498 56.8
Glyma.03G050400 Glycine max HOM05D006476 ORTHO05D008178 3.5e-156 555.8 408 66.7
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 2.9e-155 552.7 418 62.0
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 5.4e-125 452.2 419 52.0
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 1.0e-123 448.0 401 51.1
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 1.8e-120 437.2 389 53.7
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 1.9e-117 427.2 397 51.4
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 7.1e-109 398.7 257 68.5
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 1.2e-108 397.9 382 47.6
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 2.0e-71 274.2 170 74.1
Oeu061560.1 Olea europaea HOM05D006476 ORTHO05D008178 6.7e-59 232.6 162 61.7
MD04G1164400 Malus domestica HOM05D006476 ORTHO05D008178 1.6e-52 211.5 120 80.8
MD04G1164300 Malus domestica HOM05D006476 ORTHO05D008178 1.2e-34 152.1 112 62.5
CBR_g7951 Chara braunii HOM05D006476 ORTHO05D008178 9.8e-34 149.1 314 29.9
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 1.9e-24 118.2 132 45.5
ATR0810G038 Amborella trichopoda HOM05D006476 ORTHO05D008178 7.8e-15 86.3 89 42.7
RcHm_v2.0_Chr3g0461921 Rosa chinensis HOM05D006476 ORTHO05D008178 1.5e-13 82.0 56 62.5
Cre17.g727100 Chlamydomonas reinhardtii HOM05D006476 ORTHO05D008178 1.1e-08 65.9 71 40.8
MCO15G063 Micromonas commoda HOM05D006476 ORTHO05D008178 1.9e-08 65.1 66 39.4
PRCOL_00007100 Prasinoderma coloniale HOM05D006476 ORTHO05D008178 2.1e-07 61.6 99 31.3
BcaNung03295 Brassica carinata HOM05D006476 ORTHO05D008178 6.6e-06 56.6 82 31.7
C09p74660 Brassica napus HOM05D000872 ORTHO05D000777 6.6e-06 56.6 82 31.7
BolC9t60200H Brassica oleracea HOM05D006476 ORTHO05D008178 6.6e-06 56.6 82 31.7


User provided reference genes

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