Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund10710 Selenicereus undatus HOM05D005892 ORTHO05D007364 2.2e-236 822.0 440 100.0
AUR62036522 Chenopodium quinoa HOM05D005892 ORTHO05D007364 9.4e-131 471.1 325 72.9
EL10Ac9g21147 Beta vulgaris HOM05D005892 ORTHO05D007364 3.7e-127 459.1 342 69.6
Cfa020027 Carpinus fangiana HOM05D005892 ORTHO05D007364 4.1e-126 455.7 352 72.2
AUR62042262 Chenopodium quinoa HOM05D005892 ORTHO05D007364 9.1e-126 454.5 307 74.3
Ah.10g030320 Amaranthus hybridus HOM05D005892 ORTHO05D007364 3.5e-125 452.6 319 72.4
CiPaw.10G017200 Carya illinoinensis HOM05D005892 ORTHO05D007364 6.5e-124 448.4 324 71.0
CSS0032108 Camellia sinensis var. sinensis HOM05D005892 ORTHO05D007364 2.5e-123 446.4 319 70.8
Hma1.2p1_1525F.1_g288970 Hydrangea macrophylla HOM05D005892 ORTHO05D007364 1.2e-122 444.1 322 71.1
Ciclev10011749m.g Citrus clementina HOM05D005892 ORTHO05D007364 5.2e-121 438.7 326 69.0
Thecc.05G104100 Theobroma cacao HOM05D005892 ORTHO05D007364 9.8e-120 434.5 324 68.5
GSVIVG01029940001 Vitis vinifera HOM05D005892 ORTHO05D007364 1.3e-119 434.1 328 68.6
Peaxi162Scf01139g00002 Petunia axillaris HOM05D005892 ORTHO05D007364 5.4e-118 428.7 318 68.6
COL.COLO4_29579 Corchorus olitorius HOM05D005892 ORTHO05D007364 9.1e-118 427.9 326 68.4
FvH4_6g20290 Fragaria vesca HOM05D005892 ORTHO05D007364 9.1e-118 427.9 325 68.0
FAN05G3301 Fragaria x ananassa HOM05D005892 ORTHO05D007364 9.1e-118 427.9 325 68.0
FAN14G3222 Fragaria x ananassa HOM05D005892 ORTHO05D007364 9.1e-118 427.9 325 68.0
Atru.chr8.1369 Acer truncatum HOM05D005892 ORTHO05D007364 2.0e-117 426.8 331 68.0
Prupe.7G094800 Prunus persica HOM05D005892 ORTHO05D007364 3.5e-117 426.0 325 68.3
RcHm_v2.0_Chr3g0475881 Rosa chinensis HOM05D005892 ORTHO05D007364 6.6e-116 421.8 325 67.1
Lj3A860G48 Lonicera japonica HOM05D005892 ORTHO05D007364 8.6e-116 421.4 326 67.8
Gorai.002G235400 Gossypium raimondii HOM05D005892 ORTHO05D007364 1.9e-115 420.2 322 66.8
Cpa.g.sc35.59 Carica papaya HOM05D005892 ORTHO05D007364 2.5e-115 419.9 324 66.7
FAN09G4751 Fragaria x ananassa HOM05D005892 ORTHO05D007364 3.3e-115 419.5 325 66.8
Duzib093G2092 Durio zibethinus HOM05D005892 ORTHO05D007364 4.2e-115 419.1 322 67.4
Manes.08G033200 Manihot esculenta HOM05D005892 ORTHO05D007364 4.2e-115 419.1 325 68.3
Actinidia12433 Actinidia chinensis HOM05D005892 ORTHO05D007364 5.5e-115 418.7 322 66.8
TAR633G2239 Trochodendron aralioides HOM05D005892 ORTHO05D007364 5.5e-115 418.7 325 67.1
Nn2g14624 Nelumbo nucifera HOM05D005892 ORTHO05D007364 7.2e-115 418.3 329 66.3
Gohir.A01G201600 Gossypium hirsutum HOM05D005892 ORTHO05D007364 9.5e-115 417.9 322 66.5
Gohir.D01G191500 Gossypium hirsutum HOM05D005892 ORTHO05D007364 2.8e-114 416.4 322 66.1
Nitab4.5_0007165g0010 Nicotiana tabacum HOM05D005892 ORTHO05D007364 8.0e-114 414.8 318 67.0
PGR142G3547 Punica granatum HOM05D005892 ORTHO05D007364 2.3e-113 413.3 321 66.7
Nitab4.5_0005476g0010 Nicotiana tabacum HOM05D005892 ORTHO05D007364 6.8e-113 411.8 318 66.7
MD14G1038600 Malus domestica HOM05D005892 ORTHO05D007364 8.9e-113 411.4 325 67.4
Potri.016G070700 Populus trichocarpa HOM05D005892 ORTHO05D007364 8.9e-113 411.4 321 65.7
QL07p036776 Quercus lobata HOM05D005892 ORTHO05D007364 8.9e-113 411.4 381 59.6
Glyma.19G026300 Glycine max HOM05D005892 ORTHO05D007364 1.2e-112 411.0 321 67.0
PGSC0003DMG400006864 Solanum tuberosum HOM05D005892 ORTHO05D007364 5.7e-112 408.7 318 66.4
ClCG10G018360 Citrullus lanatus HOM05D005892 ORTHO05D007364 4.9e-111 405.6 321 64.8
Glyma.03G201900 Glycine max HOM05D005892 ORTHO05D007364 6.3e-111 405.2 324 65.4
Cc11_g05910 Coffea canephora HOM05D005892 ORTHO05D007364 1.1e-110 404.4 323 66.3
CsaV3_3G037930 Cucumis sativus L. HOM05D005892 ORTHO05D007364 1.1e-110 404.4 321 64.5
DCAR_026818 Daucus carota HOM05D005892 ORTHO05D007364 1.1e-110 404.4 321 64.8
Ca_25808_v3 Cicer arietinum L. HOM05D005892 ORTHO05D007364 1.8e-110 403.7 321 65.1
arahy.Tifrunner.gnm1.ann1.EHSJ8W Arachis hypogaea HOM05D005892 ORTHO05D007364 7.0e-110 401.7 321 63.9
Eucgr.K02619 Eucalyptus grandis HOM05D005892 ORTHO05D007364 1.6e-109 400.6 329 65.0
Phvul.001G195400 Phaseolus vulgaris HOM05D005892 ORTHO05D007364 4.5e-109 399.1 321 65.1
Solyc01g087230.3 Solanum lycopersicum HOM05D005892 ORTHO05D007364 4.5e-109 399.1 318 65.4
Sopen01g034280 Solanum pennellii HOM05D005892 ORTHO05D007364 1.3e-108 397.5 318 65.1
Haze_20187 Corylus avellana HOM05D005892 ORTHO05D007364 2.3e-108 396.7 315 67.0
PSO339G5192 Papaver somniferum HOM05D005892 ORTHO05D007364 5.0e-108 395.6 331 62.8
Psat3g029200 Pisum sativum HOM05D005892 ORTHO05D007364 6.6e-108 395.2 322 63.7
Sed0021278 Sechium edule HOM05D005892 ORTHO05D007364 6.6e-108 395.2 320 62.5
Lj1g0008745 Lotus japonicus HOM05D005892 ORTHO05D007364 1.1e-107 394.4 324 64.2
VMungo1383G1945 Vigna mungo HOM05D005892 ORTHO05D007364 1.1e-107 394.4 314 65.6
PSO384G1009 Papaver somniferum HOM05D005892 ORTHO05D007364 1.5e-107 394.0 331 62.5
Sc07g0007600 Simmondsia chinensis HOM05D005892 ORTHO05D007364 1.9e-107 393.7 300 69.3
Medtr7g106200 Medicago truncatula HOM05D005892 ORTHO05D007364 2.5e-107 393.3 321 63.9
Migut.E00525 Erythranthe guttata HOM05D005892 ORTHO05D007364 4.3e-107 392.5 321 63.6
Rhsim09G0086500 Rhododendron simsii HOM05D005892 ORTHO05D007364 7.3e-107 391.7 318 65.1
CDE02G2672 Ceratophyllum demersum HOM05D005892 ORTHO05D007364 9.5e-107 391.3 329 63.5
Lalb_Chr20g0111381 Lupinus albus HOM05D005892 ORTHO05D007364 9.5e-107 391.3 319 62.7
MSTRG.13644 Avicennia marina HOM05D005892 ORTHO05D007364 6.1e-106 388.7 320 63.4
MELO3C009537.2 Cucumis melo HOM05D005892 ORTHO05D007364 1.2e-104 384.4 363 57.0
Sabra16G0070800 Salix brachista HOM05D005892 ORTHO05D007364 2.2e-103 380.2 369 56.1
THA.LOC104816617 Tarenaya hassleriana HOM05D005892 ORTHO05D007364 2.9e-103 379.8 319 62.7
A05p39800 Brassica napus HOM05D005892 ORTHO05D007364 3.7e-103 379.4 323 63.5
arahy.Tifrunner.gnm1.ann1.PAXQ04 Arachis hypogaea HOM05D005892 ORTHO05D007364 6.4e-103 378.6 298 64.8
SalBow2G2452 Salvia bowleyana HOM05D005892 ORTHO05D007364 8.3e-103 378.3 321 61.7
BraA05t22764Z Brassica rapa HOM05D005892 ORTHO05D007364 2.4e-102 376.7 324 63.0
BolC5t34536H Brassica oleracea HOM05D005892 ORTHO05D007364 3.2e-102 376.3 323 62.5
Sp3g07480 Schrenkiella parvula HOM05D005892 ORTHO05D007364 7.0e-102 375.2 318 62.6
Aa31LG3G1670 Aethionema arabicum HOM05D005892 ORTHO05D007364 9.2e-102 374.8 323 61.9
C05p58840 Brassica napus HOM05D005892 ORTHO05D007364 9.2e-102 374.8 323 62.2
CARHR083520 Cardamine hirsuta HOM05D005892 ORTHO05D007364 9.2e-102 374.8 322 61.5
Thhalv10020833m.g Eutrema salsugineum HOM05D005892 ORTHO05D007364 1.6e-101 374.0 311 63.7
AL3G20290 Arabidopsis lyrata HOM05D005892 ORTHO05D007364 2.0e-101 373.6 323 61.0
AT3G09180 Arabidopsis thaliana HOM05D005892 ORTHO05D007364 3.5e-101 372.9 323 61.0
HanXRQChr16g0527301 Helianthus annuus HOM05D005892 ORTHO05D007364 3.5e-101 372.9 322 61.5
FAN05G1366 Fragaria x ananassa HOM05D005892 ORTHO05D007364 1.0e-100 371.3 370 56.8
BraA03t12793Z Brassica rapa HOM05D005892 ORTHO05D007364 6.6e-100 368.6 325 62.5
Os01g0263500 Oryza sativa ssp. japonica HOM05D005892 ORTHO05D007364 6.6e-100 368.6 326 59.5
Carub.0003s0830 Capsella rubella HOM05D005892 ORTHO05D007364 8.6e-100 368.2 323 60.1
Lsat_1_v5_gn_4_22820 Lactuca sativa HOM05D005892 ORTHO05D007364 2.5e-99 366.7 331 59.8
BcaC01g06891 Brassica carinata HOM05D005892 ORTHO05D007364 3.3e-99 366.3 325 61.8
BolC3t16654H Brassica oleracea HOM05D005892 ORTHO05D007364 3.3e-99 366.3 325 61.8
TPR.G14083 Trifolium pratense HOM05D005892 ORTHO05D007364 3.3e-99 366.3 337 59.1
A03p36220 Brassica napus HOM05D005892 ORTHO05D007364 2.1e-98 363.6 325 62.5
FAN05G3684 Fragaria x ananassa HOM05D005892 ORTHO05D007364 3.6e-98 362.8 282 67.0
C03p43860 Brassica napus HOM05D005892 ORTHO05D007364 8.0e-98 361.7 325 60.9
TAR633G0738 Trochodendron aralioides HOM05D005892 ORTHO05D007364 1.8e-97 360.5 282 66.7
ECA234G1824 Erigeron canadensis HOM05D005892 ORTHO05D007364 7.5e-96 355.1 318 59.7
Sabra16G0073000 Salix brachista HOM05D005892 ORTHO05D007364 7.5e-96 355.1 279 65.2
FAN05G0385 Fragaria x ananassa HOM05D005892 ORTHO05D007364 1.3e-95 354.4 281 66.9
Zm00001eb156320 Zea mays HOM05D005892 ORTHO05D007364 2.2e-95 353.6 325 58.2
MBI19_g09306_MAGBIO Magnolia biondii HOM05D005892 ORTHO05D007364 6.4e-95 352.1 290 65.9
HPP92_001347 Vanilla planifolia HOM05D005892 ORTHO05D007364 2.4e-94 350.1 333 58.6
HPP92_001371 Vanilla planifolia HOM05D005892 ORTHO05D007364 2.4e-94 350.1 333 58.6
Aqoxy1G00010 Aquilegia oxysepala HOM05D005892 ORTHO05D007364 4.6e-93 345.9 356 55.9
unitig_52.g17290 Utricularia gibba HOM05D005892 ORTHO05D007364 6.0e-93 345.5 319 58.3
CAN.G219.4 Capsicum annuum HOM05D005892 ORTHO05D007364 7.8e-93 345.1 276 64.9
Hma1.2p1_1525F.1_g288980 Hydrangea macrophylla HOM05D005892 ORTHO05D007364 2.3e-92 343.6 251 70.5
CDE04G0639 Ceratophyllum demersum HOM05D005892 ORTHO05D007364 4.7e-90 335.9 327 57.8
SGA_v2.0_scaffold65G22109 Striga asiatica HOM05D005892 ORTHO05D007364 1.8e-89 334.0 324 57.4
HPP92_001441 Vanilla planifolia HOM05D005892 ORTHO05D007364 8.3e-87 325.1 333 55.6
ATR0068G118 Amborella trichopoda HOM05D005892 ORTHO05D007364 1.4e-73 281.2 334 51.2
Zm00001eb348930 Zea mays HOM05D005892 ORTHO05D007364 1.7e-71 274.2 256 55.9
BcaB04g18552 Brassica carinata HOM05D005892 ORTHO05D007364 1.2e-64 251.5 207 60.9
RcHm_v2.0_Chr1g0331111 Rosa chinensis HOM05D005892 ORTHO05D007364 1.6e-53 214.5 128 82.8
Nn2g14691 Nelumbo nucifera HOM05D005892 ORTHO05D007364 8.7e-52 208.8 128 82.8
FAN02G1987 Fragaria x ananassa HOM05D005892 ORTHO05D007364 7.4e-51 205.7 355 40.6
Mapoly0090s0009 Marchantia polymorpha HOM05D005892 ORTHO05D007364 4.1e-49 199.9 330 38.5
Pp3c15_4850 Physcomitrium patens HOM05D005892 ORTHO05D007364 1.3e-47 194.9 341 37.8
Atru.chr9.699 Acer truncatum HOM05D005892 ORTHO05D007364 2.1e-45 187.6 124 75.0
RcHm_v2.0_Chr1g0331121 Rosa chinensis HOM05D005892 ORTHO05D007364 1.8e-41 174.5 139 62.6
AagrBONN_evm.TU.Sc2ySwM_228.2745 Anthoceros agrestis HOM05D005892 ORTHO05D007364 1.0e-36 158.7 328 32.6
Peaxi162Scf00684g00585 Petunia axillaris HOM05D005892 ORTHO05D007364 4.5e-32 143.3 242 37.6
BcaC05g29638 Brassica carinata HOM05D005892 ORTHO05D007364 7.0e-25 119.4 88 65.9
CSS0000115 Camellia sinensis var. sinensis HOM05D005892 ORTHO05D007364 3.8e-23 113.6 82 69.5
Atru.chr9.700 Acer truncatum HOM05D005892 ORTHO05D007364 8.5e-23 112.5 104 56.7
Hma1.2p1_1525F.1_g288960 Hydrangea macrophylla HOM05D005892 ORTHO05D007364 2.5e-22 110.9 80 68.8
Aa31sc80G50 Aethionema arabicum HOM05D005892 ORTHO05D007364 1.2e-21 108.6 89 65.2
HPP92_019993 Vanilla planifolia HOM05D002096 ORTHO05D002203 2.7e-13 80.9 155 37.4
Hund26022 Selenicereus undatus HOM05D009102 ORTHO05D003587 3.0e-12 77.4 60 63.3
SEGI_07863 Sequoiadendron giganteum HOM05D005892 ORTHO05D007364 2.4e-09 67.8 97 42.3


User provided reference genes

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