Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund10564 Selenicereus undatus HOM05D005597 ORTHO05D007304 0.0e+00 1136.7 563 100.0
AUR62043187 Chenopodium quinoa HOM05D005597 ORTHO05D007304 7.5e-274 946.8 559 82.8
EL10Ac4g08334 Beta vulgaris HOM05D005597 ORTHO05D007304 2.8e-268 928.3 576 79.7
Rhsim06G0207300 Rhododendron simsii HOM05D005597 ORTHO05D007304 2.3e-259 898.7 558 77.8
Gorai.013G173400 Gossypium raimondii HOM05D005597 ORTHO05D007304 9.2e-256 886.7 566 76.3
Gohir.A13G149000 Gossypium hirsutum HOM05D005597 ORTHO05D007304 1.2e-255 886.3 566 76.3
Thecc.07G110000 Theobroma cacao HOM05D005597 ORTHO05D007304 1.6e-255 885.9 569 76.6
TWI38G1600 Tripterygium wilfordii HOM05D005597 ORTHO05D007304 1.3e-254 882.9 557 75.8
Manes.03G102000 Manihot esculenta HOM05D005597 ORTHO05D007304 3.0e-254 881.7 558 75.8
Duzib213G0141 Durio zibethinus HOM05D005597 ORTHO05D007304 6.6e-254 880.6 569 75.6
Dinv14987 Davidia involucrata HOM05D005597 ORTHO05D007304 8.6e-254 880.2 559 76.2
Lj8A149T49 Lonicera japonica HOM05D005597 ORTHO05D007304 1.5e-253 879.4 562 76.5
Actinidia12571 Actinidia chinensis HOM05D005597 ORTHO05D007304 4.3e-253 877.9 558 76.2
SGA_v2.0_scaffold47G17797 Striga asiatica HOM05D005597 ORTHO05D007304 4.3e-253 877.9 560 77.0
Duzib187G0678 Durio zibethinus HOM05D005597 ORTHO05D007304 3.6e-252 874.8 568 75.5
arahy.Tifrunner.gnm1.ann1.06PSEJ Arachis hypogaea HOM05D005597 ORTHO05D007304 4.7e-252 874.4 558 75.8
arahy.Tifrunner.gnm1.ann1.Z1JPC4 Arachis hypogaea HOM05D005597 ORTHO05D007304 1.4e-251 872.8 558 75.6
MSTRG.12867 Avicennia marina HOM05D005597 ORTHO05D007304 1.4e-251 872.8 558 75.8
CAN.G162.8 Capsicum annuum HOM05D005597 ORTHO05D007304 1.4e-251 872.8 554 75.8
CSS0014594 Camellia sinensis var. sinensis HOM05D005597 ORTHO05D007304 2.3e-251 872.1 558 75.6
Nn1g09131 Nelumbo nucifera HOM05D005597 ORTHO05D007304 2.3e-251 872.1 557 75.9
TWI39G1070 Tripterygium wilfordii HOM05D005597 ORTHO05D007304 4.0e-251 871.3 560 75.2
Atru.chr2.2174 Acer truncatum HOM05D005597 ORTHO05D007304 5.2e-251 870.9 562 75.3
TAR624G0947 Trochodendron aralioides HOM05D005597 ORTHO05D007304 2.6e-250 868.6 557 75.2
Cfa019573 Carpinus fangiana HOM05D005597 ORTHO05D007304 3.4e-250 868.2 562 76.0
QL08p026520 Quercus lobata HOM05D005597 ORTHO05D007304 5.8e-250 867.5 567 75.3
COL.COLO4_17568 Corchorus olitorius HOM05D005597 ORTHO05D007304 7.5e-250 867.1 592 72.3
CiPaw.11G160900 Carya illinoinensis HOM05D005597 ORTHO05D007304 9.9e-250 866.7 563 74.6
Hma1.2p1_1016F.1_g248150 Hydrangea macrophylla HOM05D005597 ORTHO05D007304 2.9e-249 865.1 555 76.0
TAR626G0744 Trochodendron aralioides HOM05D005597 ORTHO05D007304 2.9e-249 865.1 557 75.4
ClCG11G017480 Citrullus lanatus HOM05D005597 ORTHO05D007304 6.4e-249 864.0 560 74.8
FAN11G3052 Fragaria x ananassa HOM05D005597 ORTHO05D007304 1.9e-248 862.4 559 74.6
FvH4_3g18450 Fragaria vesca HOM05D005597 ORTHO05D007304 2.4e-248 862.1 559 74.8
CsaV3_4G033140 Cucumis sativus L. HOM05D005597 ORTHO05D007304 5.4e-248 860.9 560 74.5
FAN21G1763 Fragaria x ananassa HOM05D005597 ORTHO05D007304 7.1e-248 860.5 559 74.6
Migut.H01992 Erythranthe guttata HOM05D005597 ORTHO05D007304 4.6e-247 857.8 558 75.6
PGR083G2138 Punica granatum HOM05D005597 ORTHO05D007304 6.0e-247 857.4 561 74.5
Eucgr.F01228 Eucalyptus grandis HOM05D005597 ORTHO05D007304 3.9e-246 854.7 564 75.2
PGSC0003DMG400012388 Solanum tuberosum HOM05D005597 ORTHO05D007304 4.3e-245 851.3 556 74.3
Potri.011G110800 Populus trichocarpa HOM05D005597 ORTHO05D007304 5.6e-245 850.9 560 73.2
Solyc07g062540.3 Solanum lycopersicum HOM05D005597 ORTHO05D007304 9.5e-245 850.1 556 73.9
Lalb_Chr01g0006811 Lupinus albus HOM05D005597 ORTHO05D007304 1.2e-244 849.7 551 74.2
RcHm_v2.0_Chr5g0031201 Rosa chinensis HOM05D005597 ORTHO05D007304 1.2e-244 849.7 563 73.4
MD03G1241900 Malus domestica HOM05D005597 ORTHO05D007304 2.1e-244 849.0 565 74.0
Sopen07g030770 Solanum pennellii HOM05D005597 ORTHO05D007304 3.6e-244 848.2 556 73.9
FAN16G1691 Fragaria x ananassa HOM05D005597 ORTHO05D007304 1.1e-243 846.7 567 73.0
Ca_03990_v3 Cicer arietinum L. HOM05D005597 ORTHO05D007304 5.2e-243 844.3 556 73.4
Prupe.4G166500 Prunus persica HOM05D005597 ORTHO05D007304 1.5e-242 842.8 560 74.6
Medtr2g076680 Medicago truncatula HOM05D005597 ORTHO05D007304 2.0e-242 842.4 557 73.4
Lj3g0024865 Lotus japonicus HOM05D005597 ORTHO05D007304 5.8e-242 840.9 558 73.1
Phvul.005G066500 Phaseolus vulgaris HOM05D005597 ORTHO05D007304 7.6e-242 840.5 554 74.4
MD11G1261800 Malus domestica HOM05D005597 ORTHO05D007304 6.4e-241 837.4 562 73.0
THA.LOC104812323 Tarenaya hassleriana HOM05D005597 ORTHO05D007304 2.4e-240 835.5 560 72.5
Ciclev10019496m.g Citrus clementina HOM05D005597 ORTHO05D007304 9.2e-240 833.6 562 73.0
Sabra11G0098300 Salix brachista HOM05D005597 ORTHO05D007304 9.2e-240 833.6 607 68.9
Sed0009860 Sechium edule HOM05D005597 ORTHO05D007304 3.5e-239 831.6 518 76.1
GSVIVG01014208001 Vitis vinifera HOM05D005597 ORTHO05D007304 7.8e-239 830.5 502 77.9
BolC5t30227H Brassica oleracea HOM05D005597 ORTHO05D007304 1.0e-238 830.1 556 71.2
TPR.G19385 Trifolium pratense HOM05D005597 ORTHO05D007304 1.3e-238 829.7 564 72.5
Aqoxy1G02067 Aquilegia oxysepala HOM05D005597 ORTHO05D007304 3.0e-238 828.6 562 72.1
BraA06t24441Z Brassica rapa HOM05D005597 ORTHO05D007304 3.0e-238 828.6 556 71.2
BcaC05g25546 Brassica carinata HOM05D005597 ORTHO05D007304 5.1e-238 827.8 556 71.0
C05p15120 Brassica napus HOM05D005597 ORTHO05D007304 5.1e-238 827.8 556 71.6
BcaC07g38821 Brassica carinata HOM05D005597 ORTHO05D007304 8.7e-238 827.0 558 71.3
C08p17610 Brassica napus HOM05D005597 ORTHO05D007304 8.7e-238 827.0 558 71.3
AL1G29070 Arabidopsis lyrata HOM05D005597 ORTHO05D007304 1.1e-237 826.6 557 72.2
VMungo1080G1355 Vigna mungo HOM05D005597 ORTHO05D007304 1.9e-237 825.9 555 74.1
A06p12800 Brassica napus HOM05D005597 ORTHO05D007304 2.5e-237 825.5 556 71.0
Carub.0001s1664 Capsella rubella HOM05D005597 ORTHO05D007304 2.5e-237 825.5 558 72.0
Sp1g15040 Schrenkiella parvula HOM05D005597 ORTHO05D007304 2.5e-237 825.5 556 71.4
A08p31230 Brassica napus HOM05D005597 ORTHO05D007304 3.3e-237 825.1 556 71.9
BraA08t35046Z Brassica rapa HOM05D005597 ORTHO05D007304 3.3e-237 825.1 556 71.9
CARHR017370 Cardamine hirsuta HOM05D005597 ORTHO05D007304 3.3e-237 825.1 562 71.7
BcaB02g06666 Brassica carinata HOM05D005597 ORTHO05D007304 4.3e-237 824.7 557 70.7
MBI07_g03181_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D007304 4.3e-237 824.7 551 72.6
Glyma.12G229300 Glycine max HOM05D005597 ORTHO05D007304 9.6e-237 823.5 520 76.2
AT1G16900 Arabidopsis thaliana HOM05D005597 ORTHO05D007304 2.1e-236 822.4 557 71.3
Glyma.13G270500 Glycine max HOM05D005597 ORTHO05D007304 2.1e-236 822.4 554 72.6
vmacro11932 Vaccinium macrocarpon HOM05D005597 ORTHO05D007304 3.6e-236 821.6 581 68.2
CANSAT35G0471 Cannabis sativa HOM05D005597 ORTHO05D007304 6.2e-236 820.8 534 75.7
Cc05_g11200 Coffea canephora HOM05D005597 ORTHO05D007304 2.4e-235 818.9 502 76.7
BolC8t49386H Brassica oleracea HOM05D005597 ORTHO05D007304 1.5e-234 816.2 541 71.9
Thhalv10007218m.g Eutrema salsugineum HOM05D005597 ORTHO05D007304 7.6e-234 813.9 558 70.4
BcaB03g13027 Brassica carinata HOM05D005597 ORTHO05D007304 1.3e-233 813.1 537 72.3
HanXRQChr14g0442721 Helianthus annuus HOM05D005597 ORTHO05D007304 1.7e-233 812.8 562 70.5
AUR62019570 Chenopodium quinoa HOM05D005597 ORTHO05D007304 2.4e-232 808.9 558 73.8
ECA240G4584 Erigeron canadensis HOM05D000832 ORTHO05D000982 4.2e-232 808.1 562 69.6
ATR0602G238 Amborella trichopoda HOM05D005597 ORTHO05D007304 7.8e-231 803.9 560 69.3
CDE02G4663 Ceratophyllum demersum HOM05D005597 ORTHO05D007304 2.3e-230 802.4 557 70.2
Lsat_1_v5_gn_9_100260 Lactuca sativa HOM05D005597 ORTHO05D007304 2.3e-230 802.4 563 68.0
PSO675G3712 Papaver somniferum HOM05D005597 ORTHO05D007304 2.5e-229 798.9 561 69.3
PSO500G0209 Papaver somniferum HOM05D005597 ORTHO05D007304 5.6e-229 797.7 561 69.2
unitig_749.g13539 Utricularia gibba HOM05D005597 ORTHO05D007304 5.6e-229 797.7 559 69.2
CSS0003229 Camellia sinensis var. sinensis HOM05D005597 ORTHO05D007304 2.8e-228 795.4 557 71.1
FAN25G0069 Fragaria x ananassa HOM05D005597 ORTHO05D007304 4.8e-228 794.7 565 69.4
Aa31LG7G1320 Aethionema arabicum HOM05D005597 ORTHO05D007304 5.4e-224 781.2 558 69.5
SalBow7G0883 Salvia bowleyana HOM05D005597 ORTHO05D007304 5.6e-221 771.2 511 75.0
Haze_09335 Corylus avellana HOM05D005597 ORTHO05D007304 3.1e-219 765.4 648 62.8
Os01g0209000 Oryza sativa ssp. japonica HOM05D005597 ORTHO05D007304 1.2e-215 753.4 519 68.4
Zm00001eb120330 Zea mays HOM05D005597 ORTHO05D007304 1.6e-215 753.1 559 66.2
Sc03g0010510 Simmondsia chinensis HOM05D005597 ORTHO05D007304 1.1e-203 713.8 431 81.7
Duzib213G0888 Durio zibethinus HOM05D005597 ORTHO05D007304 1.1e-200 703.7 437 77.6
HPP92_004052 Vanilla planifolia HOM05D005597 ORTHO05D007304 7.9e-199 697.6 603 60.5
Peaxi162Scf00069g02235 Petunia axillaris HOM05D005597 ORTHO05D007304 1.5e-194 683.3 425 76.5
DCAR_013152 Daucus carota HOM05D005597 ORTHO05D007304 7.2e-192 674.5 441 73.9
Ah.06g185290 Amaranthus hybridus HOM05D005597 ORTHO05D007304 8.8e-190 667.5 445 78.2
MELO3C025637.2 Cucumis melo HOM05D005597 ORTHO05D007304 3.7e-188 662.1 423 75.4
Gohir.D13G153500 Gossypium hirsutum HOM05D005597 ORTHO05D007304 5.9e-186 654.8 397 77.8
Hma1.2p1_1016F.1_g248140 Hydrangea macrophylla HOM05D005597 ORTHO05D007304 1.0e-182 644.0 433 75.1
Mapoly0059s0091 Marchantia polymorpha HOM05D005597 ORTHO05D007304 5.0e-177 625.2 534 56.7
Psat5g238320 Pisum sativum HOM05D005597 ORTHO05D007304 1.6e-175 620.2 427 72.8
AagrBONN_evm.TU.Sc2ySwM_228.833 Anthoceros agrestis HOM05D005597 ORTHO05D007304 5.6e-152 542.0 529 53.5
SMO143G0166 Selaginella moellendorffii HOM05D005597 ORTHO05D007304 2.1e-151 540.0 519 54.5
Pp3c6_16240 Physcomitrium patens HOM05D005597 ORTHO05D007304 8.0e-151 538.1 573 50.8
Dinv18359 Davidia involucrata HOM05D005597 ORTHO05D007304 1.7e-148 530.4 374 74.1
CBR_g38668 Chara braunii HOM05D005597 ORTHO05D007304 9.6e-120 434.9 572 42.5
SHI21382 Sapria himalayana HOM05D005597 ORTHO05D007304 4.6e-114 416.0 382 59.2
Nitab4.5_0001145g0050 Nicotiana tabacum HOM05D005597 ORTHO05D007304 7.9e-90 335.5 280 64.3
SHI21385 Sapria himalayana HOM05D000105 ORTHO05D000023 3.3e-88 330.1 210 69.5
Cpa.g.sc97.103 Carica papaya HOM05D005597 ORTHO05D007304 4.8e-87 326.2 215 77.2
Nitab4.5_0000246g0240 Nicotiana tabacum HOM05D005597 ORTHO05D007304 5.7e-80 302.8 574 37.6
Oeu059263.1 Olea europaea HOM05D005597 ORTHO05D007304 8.2e-79 298.9 219 70.8
SEGI_23731 Sequoiadendron giganteum HOM05D005597 ORTHO05D007304 2.7e-74 283.9 213 57.3
PRCOL_00005636 Prasinoderma coloniale HOM05D005597 ORTHO05D007304 5.9e-69 266.2 574 34.3
MCO07G083 Micromonas commoda HOM05D005597 ORTHO05D007304 7.7e-69 265.8 592 31.9
Cfa025275 Carpinus fangiana HOM05D005597 ORTHO05D028637 4.7e-58 229.9 448 35.9
Gohir.A07G160600 Gossypium hirsutum HOM05D005597 ORTHO05D007304 8.3e-55 219.2 143 76.9
Gohir.A04G098250 Gossypium hirsutum HOM05D005597 ORTHO05D007304 2.0e-53 214.5 143 74.8
Gohir.A03G066250 Gossypium hirsutum HOM05D005597 ORTHO05D007304 1.6e-50 204.9 131 77.9
Actinidia09803 Actinidia chinensis HOM05D005597 ORTHO05D007304 1.0e-49 202.2 126 72.2
Lsat_1_v5_gn_9_21740 Lactuca sativa HOM05D005597 ORTHO05D007174 4.0e-41 173.7 128 74.2
Atru.chr2.2170 Acer truncatum HOM05D005597 ORTHO05D007304 9.8e-40 169.1 95 74.7
COL.COLO4_17572 Corchorus olitorius HOM05D005597 ORTHO05D007304 1.7e-39 168.3 106 76.4
Actinidia24363 Actinidia chinensis HOM05D005597 ORTHO05D007304 4.7e-26 123.6 88 75.0
MBI01_g45631_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D010488 7.6e-16 89.7 63 61.9
MBI01_g45400_MAGBIO Magnolia biondii HOM05D005597 ORTHO05D010488 1.7e-15 88.6 50 76.0
Potri.001G392050 Populus trichocarpa HOM05D005597 ORTHO05D007304 5.4e-14 83.6 56 69.6
Nn1g04407 Nelumbo nucifera HOM05D005597 ORTHO05D007304 1.6e-13 82.0 60 60.0
Lsat_1_v5_gn_3_114580 Lactuca sativa HOM05D002100 ORTHO05D002310 2.5e-11 74.7 59 66.1
Phvul.003G151000 Phaseolus vulgaris HOM05D005919 ORTHO05D007176 5.2e-09 67.0 329 26.7
VMungo1215G1350 Vigna mungo HOM05D005919 ORTHO05D007176 3.4e-08 64.3 372 25.5
AUR62013597 Chenopodium quinoa HOM05D005919 ORTHO05D007176 8.4e-07 59.7 321 26.5
Mapoly0152s0016 Marchantia polymorpha HOM05D005919 ORTHO05D007176 1.4e-06 58.9 339 23.9
Hma1.2p1_1531F.1_g289233 Hydrangea macrophylla HOM05D005919 ORTHO05D007176 3.2e-06 57.8 337 24.6


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