Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund10460 Selenicereus undatus HOM05D006832 ORTHO05D008292 5.2e-122 441.0 221 100.0
Sc16g0007700 Simmondsia chinensis HOM05D006832 ORTHO05D008292 7.2e-47 191.4 213 50.7
Dinv15008 Davidia involucrata HOM05D006832 ORTHO05D008292 4.4e-44 182.2 220 50.0
Dinv18383 Davidia involucrata HOM05D000051 ORTHO05D008292 2.3e-40 169.9 220 45.9
GSVIVG01014166001 Vitis vinifera HOM05D006832 ORTHO05D008292 9.5e-39 164.5 223 46.2
Sopen10g003390 Solanum pennellii HOM05D006832 ORTHO05D008292 4.7e-38 162.2 215 45.1
Actinidia03616 Actinidia chinensis HOM05D006832 ORTHO05D008292 6.1e-38 161.8 222 44.1
Solyc10g007440.3 Solanum lycopersicum HOM05D006832 ORTHO05D008292 1.0e-37 161.0 215 44.7
Eucgr.F03237 Eucalyptus grandis HOM05D006832 ORTHO05D008292 9.8e-36 154.5 212 43.9
Gorai.013G174800 Gossypium raimondii HOM05D006832 ORTHO05D008292 9.8e-36 154.5 203 42.9
Manes.15G097000 Manihot esculenta HOM05D006832 ORTHO05D008292 9.8e-36 154.5 205 42.0
Cpa.g.sc77.49 Carica papaya HOM05D006832 ORTHO05D008292 1.3e-35 154.1 213 43.2
Gohir.D13G154700 Gossypium hirsutum HOM05D006832 ORTHO05D008292 1.7e-35 153.7 206 43.7
Thecc.07G123300 Theobroma cacao HOM05D006832 ORTHO05D008292 2.2e-35 153.3 216 42.6
CANSAT56G2937 Cannabis sativa HOM05D006832 ORTHO05D008292 6.4e-35 151.8 215 42.3
RhsimUnG0013300 Rhododendron simsii HOM05D006832 ORTHO05D008292 6.4e-35 151.8 217 43.3
Rhsim04G0036900 Rhododendron simsii HOM05D006832 ORTHO05D008292 1.1e-34 151.0 217 43.3
TWI38G0771 Tripterygium wilfordii HOM05D006832 ORTHO05D008292 1.4e-34 150.6 263 36.9
Gohir.A13G150400 Gossypium hirsutum HOM05D006832 ORTHO05D008292 4.1e-34 149.1 206 42.2
Nitab4.5_0000383g0030 Nicotiana tabacum HOM05D006832 ORTHO05D008292 4.1e-34 149.1 260 38.5
RcHm_v2.0_Chr5g0030051 Rosa chinensis HOM05D006832 ORTHO05D008292 4.1e-34 149.1 217 42.9
Cc05_g10910 Coffea canephora HOM05D006832 ORTHO05D008292 7.0e-34 148.3 225 42.2
Rhsim04G0036600 Rhododendron simsii HOM05D006832 ORTHO05D008292 7.0e-34 148.3 220 42.7
Potri.001G376900 Populus trichocarpa HOM05D006832 ORTHO05D008292 1.2e-33 147.5 223 38.6
MSTRG.6686 Avicennia marina HOM05D006832 ORTHO05D008292 1.6e-33 147.1 213 41.8
Solyc10g007460.4 Solanum lycopersicum HOM05D006832 ORTHO05D008292 5.9e-33 145.2 210 42.9
Sopen10g003400 Solanum pennellii HOM05D006832 ORTHO05D008292 5.9e-33 145.2 210 42.9
MD03G1246100 Malus domestica HOM05D006832 ORTHO05D008292 1.7e-32 143.7 214 42.1
Ciclev10020819m.g Citrus clementina HOM05D006832 ORTHO05D008292 2.3e-32 143.3 218 40.4
PGSC0003DMG403021297 Solanum tuberosum HOM05D006832 ORTHO05D008292 6.6e-32 141.7 210 42.4
THA.LOC104810427 Tarenaya hassleriana HOM05D006832 ORTHO05D008292 1.5e-31 140.6 217 40.1
BcaB04g17079 Brassica carinata HOM05D006832 ORTHO05D008292 1.9e-31 140.2 217 41.0
C03p91530 Brassica napus HOM05D006832 ORTHO05D008292 2.5e-31 139.8 216 40.7
BolC3t21470H Brassica oleracea HOM05D006832 ORTHO05D008292 2.5e-31 139.8 216 40.7
Cfa019523 Carpinus fangiana HOM05D006832 ORTHO05D008292 2.5e-31 139.8 290 33.8
CARHR043680 Cardamine hirsuta HOM05D006832 ORTHO05D008292 3.3e-31 139.4 211 42.2
Peaxi162Scf00692g00121 Petunia axillaris HOM05D006832 ORTHO05D008292 3.3e-31 139.4 168 46.4
BcaC01g01392 Brassica carinata HOM05D006832 ORTHO05D008292 9.5e-31 137.9 216 40.3
CsaV3_4G032920 Cucumis sativus L. HOM05D006832 ORTHO05D008292 9.5e-31 137.9 130 50.0
Thhalv10011680m.g Eutrema salsugineum HOM05D006832 ORTHO05D008292 1.6e-30 137.1 218 39.4
Sed0018751 Sechium edule HOM05D006832 ORTHO05D008292 1.6e-30 137.1 115 57.4
FvH4_3g18000 Fragaria vesca HOM05D006832 ORTHO05D008292 2.1e-30 136.7 210 41.4
Sp1g40000 Schrenkiella parvula HOM05D006832 ORTHO05D008292 3.6e-30 136.0 213 41.3
AL1G62020 Arabidopsis lyrata HOM05D006832 ORTHO05D008292 8.0e-30 134.8 214 38.8
FAN11G1423 Fragaria x ananassa HOM05D000051 ORTHO05D008292 8.0e-30 134.8 210 41.4
FAN21G3714 Fragaria x ananassa HOM05D006832 ORTHO05D008292 8.0e-30 134.8 210 40.5
BraA08t32210Z Brassica rapa HOM05D006832 ORTHO05D008292 1.0e-29 134.4 214 38.8
A08p01560 Brassica napus HOM05D006832 ORTHO05D008292 4.0e-29 132.5 214 37.9
MELO3C025659.2 Cucumis melo HOM05D006832 ORTHO05D008292 4.0e-29 132.5 123 52.0
DCAR_013268 Daucus carota HOM05D006832 ORTHO05D008292 5.2e-29 132.1 247 37.2
MSTRG.14973 Avicennia marina HOM05D006832 ORTHO05D008292 6.8e-29 131.7 217 38.7
ClCG11G017270 Citrullus lanatus HOM05D006832 ORTHO05D008292 8.9e-29 131.3 104 57.7
AT1G53460 Arabidopsis thaliana HOM05D006832 ORTHO05D008292 1.2e-28 131.0 214 39.7
MBI07_g00466_MAGBIO Magnolia biondii HOM05D006832 ORTHO05D008292 2.0e-28 130.2 215 42.3
Sabra16G0248300 Salix brachista HOM05D006832 ORTHO05D008292 2.0e-28 130.2 223 34.5
CiPaw.11G157300 Carya illinoinensis HOM05D006832 ORTHO05D008292 5.8e-28 128.6 211 36.0
Carub.0001s4265 Capsella rubella HOM05D006832 ORTHO05D008292 7.5e-28 128.3 207 41.1
Nn3g21068 Nelumbo nucifera HOM05D006832 ORTHO05D008292 1.7e-27 127.1 242 37.6
Atru.chr2.2055_Atru.chr2.2057 Acer truncatum HOM05D006832 ORTHO05D008292 3.7e-27 125.9 227 38.3
Migut.M00714 Erythranthe guttata HOM05D006832 ORTHO05D008292 4.9e-27 125.6 217 37.3
TPR.G13159 Trifolium pratense HOM05D006832 ORTHO05D008292 1.1e-26 124.4 210 38.1
Lalb_Chr25g0285711 Lupinus albus HOM05D006832 ORTHO05D008292 1.9e-26 123.6 215 36.7
Lsat_1_v5_gn_9_100561 Lactuca sativa HOM05D006832 ORTHO05D008292 3.2e-26 122.9 228 35.1
Prupe.4G158600 Prunus persica HOM05D006832 ORTHO05D008292 5.4e-26 122.1 250 35.6
ECA240G3607 Erigeron canadensis HOM05D000109 ORTHO05D000210 1.6e-25 120.6 219 37.0
Lj3g0027307 Lotus japonicus HOM05D006832 ORTHO05D008292 1.6e-25 120.6 216 37.5
PGR031G1976 Punica granatum HOM05D006832 ORTHO05D008292 1.6e-25 120.6 214 36.9
arahy.Tifrunner.gnm1.ann1.LUID63 Arachis hypogaea HOM05D006832 ORTHO05D008292 2.0e-25 120.2 206 36.9
Phvul.005G079500 Phaseolus vulgaris HOM05D006832 ORTHO05D008292 2.0e-25 120.2 205 36.6
Psat5g234400 Pisum sativum HOM05D006832 ORTHO05D008292 2.0e-25 120.2 215 35.8
arahy.Tifrunner.gnm1.ann1.U4EZEG Arachis hypogaea HOM05D006832 ORTHO05D008292 4.6e-25 119.0 207 36.2
TAR627G1032 Trochodendron aralioides HOM05D006832 ORTHO05D008292 4.6e-25 119.0 146 44.5
Gorai.007G327100 Gossypium raimondii HOM05D006832 ORTHO05D008292 3.0e-24 116.3 219 33.8
Gohir.D11G305300 Gossypium hirsutum HOM05D006832 ORTHO05D008292 3.9e-24 115.9 219 33.8
ATR0127G025 Amborella trichopoda HOM05D006832 ORTHO05D008292 1.1e-23 114.4 215 34.9
Aa31LG10G1740 Aethionema arabicum HOM05D006832 ORTHO05D008292 1.9e-23 113.6 228 32.9
Ca_03944_v3 Cicer arietinum L. HOM05D006832 ORTHO05D008292 1.9e-23 113.6 179 41.3
SHI27646 Sapria himalayana HOM05D006832 ORTHO05D008292 3.3e-23 112.8 159 38.4
vmacro09407 Vaccinium macrocarpon HOM05D006832 ORTHO05D008292 3.3e-23 112.8 277 32.1
Glyma.13G266700 Glycine max HOM05D006832 ORTHO05D008292 5.6e-23 112.1 208 34.6
Gohir.A11G287600 Gossypium hirsutum HOM05D006832 ORTHO05D008292 7.3e-23 111.7 97 51.5
Medtr2g075470 Medicago truncatula HOM05D006832 ORTHO05D008292 1.2e-22 110.9 221 34.8
Nn6g34457 Nelumbo nucifera HOM05D006832 ORTHO05D008292 2.8e-22 109.8 251 33.5
PGSC0003DMG401021297 Solanum tuberosum HOM05D006832 ORTHO05D008292 1.8e-21 107.1 169 40.2
VMungo1080G1450 Vigna mungo HOM05D006832 ORTHO05D008292 4.0e-21 105.9 171 36.3
Aqoxy4G00218 Aquilegia oxysepala HOM05D006832 ORTHO05D008292 5.2e-21 105.5 225 34.2
BraA08t32219Z Brassica rapa HOM05D006832 ORTHO05D008292 6.8e-21 105.1 214 36.0
Solyc12g044440.2 Solanum lycopersicum HOM05D006832 ORTHO05D008292 8.9e-21 104.8 80 60.0
CAN.G904.32 Capsicum annuum HOM05D006832 ORTHO05D008292 3.4e-20 102.8 173 39.3
Medtr2g075450 Medicago truncatula HOM05D006832 ORTHO05D008292 2.9e-19 99.8 157 36.9
unitig_899.g15298 Utricularia gibba HOM05D006832 ORTHO05D008292 4.9e-19 99.0 110 44.5
Aqoxy1G01968 Aquilegia oxysepala HOM05D006832 ORTHO05D008292 1.9e-18 97.1 103 44.7
QL08p024452 Quercus lobata HOM05D006832 ORTHO05D008292 3.2e-18 96.3 169 36.1
Oeu021042.1 Olea europaea HOM05D006832 ORTHO05D008292 4.1e-18 95.9 181 37.6
VMungo1080G1649 Vigna mungo HOM05D006832 ORTHO05D008292 4.1e-18 95.9 206 33.5
MD11G1267100 Malus domestica HOM05D006832 ORTHO05D008292 1.6e-17 94.0 89 51.7
SGA_v2.0_scaffold73G24393 Striga asiatica HOM05D006832 ORTHO05D008292 2.7e-17 93.2 190 32.6
Os01g0203300 Oryza sativa ssp. japonica HOM05D006832 ORTHO05D008292 1.1e-15 87.8 92 47.8
Gohir.A11G288300 Gossypium hirsutum HOM05D006832 ORTHO05D008292 5.6e-15 85.5 70 55.7
Haze_09257 Corylus avellana HOM05D006832 ORTHO05D008292 9.5e-15 84.7 250 28.0
HPP92_005191 Vanilla planifolia HOM05D006832 ORTHO05D008292 2.3e-13 80.1 102 41.2
Sopen12g022760 Solanum pennellii HOM05D006832 ORTHO05D008292 3.1e-13 79.7 123 38.2
SalBow1G6294 Salvia bowleyana HOM05D006832 ORTHO05D008292 4.0e-13 79.3 74 45.9
SalBow8G1352 Salvia bowleyana HOM05D006832 ORTHO05D008292 6.8e-13 78.6 74 45.9
Zm00001eb120760 Zea mays HOM05D006832 ORTHO05D008292 1.2e-12 77.8 70 50.0
A08p01660 Brassica napus HOM05D006832 ORTHO05D008292 1.7e-11 73.9 214 30.4
HanXRQChr13g0389661 Helianthus annuus HOM05D006832 ORTHO05D008292 2.2e-11 73.6 62 54.8
CSS0011221 Camellia sinensis var. sinensis HOM05D006832 ORTHO05D008292 7.1e-10 68.6 171 33.3
Haze_09255 Corylus avellana HOM05D006832 ORTHO05D008292 4.6e-09 65.9 215 27.0
CDE10G0961 Ceratophyllum demersum HOM05D006832 ORTHO05D008292 3.0e-08 63.2 212 27.4
FAN25G0243 Fragaria x ananassa HOM05D006832 ORTHO05D008292 5.1e-08 62.4 138 34.1
FAN25G0879 Fragaria x ananassa HOM05D006832 ORTHO05D008292 5.1e-08 62.4 65 52.3
PGSC0003DMG402021297 Solanum tuberosum HOM05D006832 ORTHO05D008292 8.6e-08 61.6 42 64.3
CSS0014738 Camellia sinensis var. sinensis HOM05D006832 ORTHO05D008292 1.1e-07 61.2 171 31.6
CSS0020404 Camellia sinensis var. sinensis HOM05D006832 ORTHO05D008292 5.6e-07 58.9 40 65.0
CSS0031109 Camellia sinensis var. sinensis HOM05D006832 ORTHO05D008292 5.6e-07 58.9 40 65.0
PGSC0003DMG400026458 Solanum tuberosum HOM05D000017 ORTHO05D000308 7.3e-07 58.5 113 33.6
MBI06_g10736_MAGBIO Magnolia biondii HOM05D006832 ORTHO05D008292 1.2e-06 57.8 181 28.2
MBI06_g16692_MAGBIO Magnolia biondii HOM05D003318 ORTHO05D008292 1.2e-06 57.8 66 42.4
CDE10G0461 Ceratophyllum demersum HOM05D000680 ORTHO05D000738 2.1e-06 57.0 50 52.0
CSS0032499 Camellia sinensis var. sinensis HOM05D006832 ORTHO05D008292 3.6e-06 56.2 40 62.5
CSS0050002 Camellia sinensis var. sinensis HOM05D006832 ORTHO05D008292 3.6e-06 56.2 172 30.8


User provided reference genes

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