Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund10282 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.5e-283 978.8 485 100.0
Hund27810 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.7e-261 904.4 500 91.6
Hund29659 Selenicereus undatus HOM05D004473 ORTHO05D005652 3.8e-258 894.4 510 89.6
Hund30056 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.8e-253 878.2 510 88.6
Hund29400 Selenicereus undatus HOM05D004473 ORTHO05D005652 8.2e-253 876.7 510 88.4
Hund30352 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.2e-250 868.6 510 87.8
Hund29000 Selenicereus undatus HOM05D004473 ORTHO05D005652 9.4e-241 836.6 510 85.3
Hund29926 Selenicereus undatus HOM05D004473 ORTHO05D005652 4.0e-239 831.2 510 84.9
Hund28272 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.4e-236 822.0 510 83.9
Hund29405 Selenicereus undatus HOM05D004473 ORTHO05D005652 7.5e-222 773.9 510 80.8
EL10As2g23210 Beta vulgaris HOM05D004473 ORTHO05D005652 1.5e-209 733.0 505 75.8
Hma1.2p1_4210F.1_g338470 Hydrangea macrophylla HOM05D004473 ORTHO05D005652 2.7e-195 685.6 513 71.5
Hund25918 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.5e-190 669.8 407 85.5
ScUNg0001290 Simmondsia chinensis HOM05D004473 ORTHO05D005652 4.1e-188 661.8 508 70.3
Lj2P1239T154 Lonicera japonica HOM05D004473 ORTHO05D005652 3.8e-173 612.1 511 66.1
RcHm_v2.0_CPg0502521 Rosa chinensis HOM05D004473 ORTHO05D005652 9.3e-172 607.4 511 63.2
Sopen01g008040 Solanum pennellii HOM05D004473 ORTHO05D005652 4.6e-171 605.1 514 65.2
DCAR_032465 Daucus carota HOM05D004473 ORTHO05D005652 6.0e-171 604.7 513 64.9
CAN.G939.10 Capsicum annuum HOM05D004473 ORTHO05D005652 8.1e-168 594.3 511 65.0
Potri.013G138201 Populus trichocarpa HOM05D004473 ORTHO05D005652 1.9e-164 583.2 515 62.5
HanXRQChr00c0368g0574161 Helianthus annuus HOM05D004473 ORTHO05D005652 6.7e-162 574.7 510 63.7
HanXRQCPg0579741 Helianthus annuus HOM05D004473 ORTHO05D005652 6.7e-162 574.7 510 63.7
PGR111G0117 Punica granatum HOM05D004473 ORTHO05D005652 3.3e-161 572.4 505 63.4
Atru.chr6.757 Acer truncatum HOM05D004473 ORTHO05D005652 4.3e-161 572.0 511 61.4
HanXRQChr00c0125g0571751 Helianthus annuus HOM05D004473 ORTHO05D005652 5.8e-158 561.6 497 63.6
SalBow1G8010 Salvia bowleyana HOM05D004473 ORTHO05D005652 3.8e-157 558.9 508 59.4
Medtr4g051280 Medicago truncatula HOM05D004473 ORTHO05D005652 7.1e-156 554.7 495 61.4
Medtr3g035685 Medicago truncatula HOM05D004473 ORTHO05D005652 8.7e-154 547.7 513 59.3
Hund11181 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.3e-152 543.9 485 62.7
Eucgr.D01147 Eucalyptus grandis HOM05D004473 ORTHO05D005652 1.1e-148 530.8 409 69.9
Sed0024057 Sechium edule HOM05D004473 ORTHO05D005652 3.2e-148 529.3 511 58.3
HanXRQChr11g0326581 Helianthus annuus HOM05D004473 ORTHO05D005652 7.2e-148 528.1 488 61.9
ATCG00040 Arabidopsis thaliana HOM05D004473 ORTHO05D005652 1.2e-142 510.8 516 56.2
C06p21390 Brassica napus HOM05D004473 ORTHO05D005652 2.0e-142 510.0 516 56.2
BraSC143t45676Z Brassica rapa HOM05D004473 ORTHO05D005652 3.4e-142 509.2 516 56.2
PSO548G0076 Papaver somniferum HOM05D004473 ORTHO05D005652 4.5e-142 508.8 513 57.5
Sed0017792 Sechium edule HOM05D004473 ORTHO05D005652 7.7e-142 508.1 511 56.8
TWI34G1450 Tripterygium wilfordii HOM05D004473 ORTHO05D005652 8.5e-141 504.6 444 63.3
Gohir.A04G039120 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.1e-140 504.2 410 67.3
Gohir.A04G039150 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.1e-140 504.2 410 67.3
Solyc00g500048.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 1.1e-140 504.2 514 58.4
Solyc00g500131.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 1.1e-140 504.2 514 58.4
Solyc00g500201.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 1.1e-140 504.2 514 58.4
Solyc00g500295.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 1.1e-140 504.2 514 58.4
Solyc00g500330.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 1.1e-140 504.2 514 58.4
BcaC05g28805 Brassica carinata HOM05D004473 ORTHO05D005652 1.9e-140 503.4 516 56.2
Medtr7g021760 Medicago truncatula HOM05D004473 ORTHO05D005652 6.1e-139 498.4 513 56.7
Lsat_1_v5_gn_7_76981 Lactuca sativa HOM05D004473 ORTHO05D005652 2.8e-136 489.6 450 60.7
Lalb_Chr07g0191541 Lupinus albus HOM05D004473 ORTHO05D005652 3.0e-130 469.5 515 54.8
LjContig00489g0020099 Lotus japonicus HOM05D004473 ORTHO05D005652 6.7e-130 468.4 506 54.3
BraSC25t45889Z Brassica rapa HOM05D004473 ORTHO05D005652 1.7e-128 463.8 476 56.5
Medtr0002s0390 Medicago truncatula HOM05D004473 ORTHO05D005652 2.0e-126 456.8 513 51.7
LjContig00318g0021272 Lotus japonicus HOM05D004473 ORTHO05D005652 8.8e-122 441.4 507 51.7
BraSC151t45687Z Brassica rapa HOM05D004473 ORTHO05D005652 9.7e-121 438.0 402 60.0
SGA_v2.0_scaffold479G52250 Striga asiatica HOM05D004473 ORTHO05D005652 6.3e-120 435.3 398 60.3
Eucgr.D00924 Eucalyptus grandis HOM05D004473 ORTHO05D005652 2.0e-118 430.3 477 54.3
Hund10683 Selenicereus undatus HOM05D004473 ORTHO05D005652 9.8e-113 411.4 300 74.3
Gohir.1Z050066 Gossypium hirsutum HOM05D004473 ORTHO05D005652 2.0e-110 403.7 489 51.5
Lj2P1238T61 Lonicera japonica HOM05D004473 ORTHO05D005652 1.1e-108 397.9 340 63.5
CAN.G386.22 Capsicum annuum HOM05D004473 ORTHO05D005652 2.6e-105 386.7 303 68.6
GSVIVG01022885001 Vitis vinifera HOM05D004473 ORTHO05D005652 8.9e-98 361.7 456 48.9
Lsat_1_v5_gn_2_89740 Lactuca sativa HOM05D004473 ORTHO05D005652 7.0e-95 352.1 308 62.0
Gohir.1Z049403 Gossypium hirsutum HOM05D004473 ORTHO05D005652 2.1e-91 340.5 484 47.5
HanXRQChr00c0572g0575931 Helianthus annuus HOM05D004473 ORTHO05D005652 1.9e-87 327.4 314 58.9
Peaxi162Scf00219g00048 Petunia axillaris HOM05D004473 ORTHO05D001250 2.4e-87 327.0 360 56.4
Gohir.A08G095662 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.2e-83 314.7 248 66.1
arahy.Tifrunner.gnm1.ann1.40BINF Arachis hypogaea HOM05D004473 ORTHO05D005652 4.7e-83 312.8 415 47.5
Peaxi162Scf00211g00244 Petunia axillaris HOM05D004473 ORTHO05D005652 7.8e-78 295.4 281 61.6
Nn4g24630 Nelumbo nucifera HOM05D004473 ORTHO05D005652 6.6e-69 265.8 183 73.2
PGSC0003DMG400041047 Solanum tuberosum HOM05D004473 ORTHO05D005652 4.7e-67 259.6 230 60.0
Nn2g10392 Nelumbo nucifera HOM05D004473 ORTHO05D005652 2.9e-64 250.4 271 53.9
BcaB03g16404 Brassica carinata HOM05D004473 ORTHO05D005652 2.4e-58 230.7 224 60.3
Gorai.002G165800 Gossypium raimondii HOM05D001387 ORTHO05D001250 2.6e-57 227.3 315 44.4
Psat0s1330g0240 Pisum sativum HOM05D004473 ORTHO05D005652 4.2e-55 219.9 195 64.6
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 6.7e-53 212.6 267 46.8
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 6.7e-53 212.6 267 46.8
Thhalv10001851m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 3.7e-51 206.8 211 51.7
HanXRQChr00c0524g0575451 Helianthus annuus HOM05D004473 ORTHO05D005652 3.4e-49 200.3 222 53.2
Migut.D01408 Erythranthe guttata HOM05D004473 ORTHO05D005652 9.9e-49 198.7 309 43.4
BolC2t10578H Brassica oleracea HOM05D004473 ORTHO05D005652 3.8e-48 196.8 213 50.2
BolSC37t60777H Brassica oleracea HOM05D004473 ORTHO05D005652 3.8e-48 196.8 213 50.2
BolSC45t60885H Brassica oleracea HOM05D004473 ORTHO05D005652 3.8e-48 196.8 213 50.2
BolSC45t60929H Brassica oleracea HOM05D004473 ORTHO05D005652 3.8e-48 196.8 213 50.2
BolSC46t60978H Brassica oleracea HOM05D004473 ORTHO05D005652 3.8e-48 196.8 213 50.2
Oeu012780.1 Olea europaea HOM05D001387 ORTHO05D001250 4.6e-46 189.9 130 76.9
Gohir.A08G070362 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.3e-43 181.8 137 73.0
Gorai.001G044100 Gossypium raimondii HOM05D004473 ORTHO05D005652 1.3e-43 181.8 174 60.9
Nitab4.5_0007979g0030 Nicotiana tabacum HOM05D001387 ORTHO05D001250 5.3e-42 176.4 353 38.8
Hund10684 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.2e-40 171.0 151 64.2
Solyc09g061390.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 7.1e-39 166.0 121 73.6
Nitab4.5_0011099g0050 Nicotiana tabacum HOM05D004473 ORTHO05D005652 1.0e-37 162.2 167 55.7
Gorai.001G230600 Gossypium raimondii HOM05D004473 ORTHO05D005652 1.1e-36 158.7 134 67.9
Nitab4.5_0001439g0120 Nicotiana tabacum HOM05D004473 ORTHO05D005652 4.3e-36 156.8 113 74.3
CAN.G85.6 Capsicum annuum HOM05D004473 ORTHO05D005652 3.1e-34 150.6 156 55.1
HanXRQChr00c0165g0572181 Helianthus annuus HOM05D004473 ORTHO05D005652 5.3e-34 149.8 121 66.1
HanXRQChr16g0503961 Helianthus annuus HOM05D004473 ORTHO05D005652 5.3e-34 149.8 138 68.1
Hund04106 Selenicereus undatus HOM05D004473 ORTHO05D005652 5.9e-33 146.4 160 57.5
TPR.G10220 Trifolium pratense HOM05D004473 ORTHO05D005652 5.9e-33 146.4 121 59.5
arahy.Tifrunner.gnm1.ann1.EJ7WQI Arachis hypogaea HOM05D004473 ORTHO05D005652 3.2e-31 140.6 135 64.4
CAN.G100.39 Capsicum annuum HOM05D004473 ORTHO05D005652 7.2e-31 139.4 156 51.9
TPR.G40775 Trifolium pratense HOM05D004473 ORTHO05D005652 7.9e-30 136.0 116 56.0
Duzib147G0859 Durio zibethinus HOM05D004473 ORTHO05D005696 1.4e-29 135.2 102 60.8
Medtr7g098060 Medicago truncatula HOM05D004473 ORTHO05D005652 5.1e-29 133.3 107 62.6
HanXRQChr00c0126g0571831 Helianthus annuus HOM05D004473 ORTHO05D005652 1.5e-28 131.7 143 51.0
HanXRQChr16g0503951 Helianthus annuus HOM05D004473 ORTHO05D005652 1.7e-27 128.3 160 49.4
Medtr7g117940 Medicago truncatula HOM05D004473 ORTHO05D005652 2.2e-27 127.9 106 62.3
BraSC59t46519Z Brassica rapa HOM05D004473 ORTHO05D005652 3.7e-27 127.1 144 56.2
CAN.G1738.12 Capsicum annuum HOM05D004473 ORTHO05D005652 3.7e-27 127.1 142 52.1
Gorai.013G056700 Gossypium raimondii HOM05D004473 ORTHO05D005652 1.8e-26 124.8 123 61.8
Gohir.A07G155811 Gossypium hirsutum HOM05D004473 ORTHO05D005652 2.4e-26 124.4 80 76.2
MELO3C027413.2 Cucumis melo HOM05D004473 ORTHO05D005652 5.3e-26 123.2 125 57.6
Peaxi162Scf00219g00049 Petunia axillaris HOM05D004473 ORTHO05D005652 4.5e-25 120.2 98 64.3
Nn1g08463 Nelumbo nucifera HOM05D004473 ORTHO05D005652 5.9e-25 119.8 110 60.9
Thhalv10012215m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 1.3e-24 118.6 384 28.9
arahy.Tifrunner.gnm1.ann1.85ZYV6 Arachis hypogaea HOM05D004473 ORTHO05D005652 1.4e-23 115.2 154 46.8
Gorai.005G171000 Gossypium raimondii HOM05D004473 ORTHO05D005652 2.5e-23 114.4 82 65.9
GSVIVG01022429001 Vitis vinifera HOM05D004473 ORTHO05D005652 2.5e-23 114.4 115 50.4
Atru.chr7.156 Acer truncatum HOM05D004473 ORTHO05D005652 2.3e-21 107.8 82 63.4
Peaxi162Scf00211g00223 Petunia axillaris HOM05D004473 ORTHO05D005652 2.3e-21 107.8 122 53.3
HanXRQChr00c0165g0572171 Helianthus annuus HOM05D004473 ORTHO05D005652 4.8e-19 100.1 84 71.4
HanXRQChr00c0496g0575171 Helianthus annuus HOM05D004473 ORTHO05D005652 4.8e-19 100.1 86 60.5
CAN.G575.33 Capsicum annuum HOM05D004473 ORTHO05D000001 1.8e-18 98.2 116 50.0
CAN.G219.14 Capsicum annuum HOM05D004473 ORTHO05D005652 5.3e-18 96.7 58 77.6
CAN.G156.6 Capsicum annuum HOM05D004473 ORTHO05D005652 2.6e-17 94.4 72 58.3
Nn3g16148 Nelumbo nucifera HOM05D004473 ORTHO05D005652 1.0e-16 92.4 82 61.0
Medtr2g089600 Medicago truncatula HOM05D004473 ORTHO05D005652 3.8e-16 90.5 60 70.0
CAN.G130.4 Capsicum annuum HOM05D004473 ORTHO05D005652 5.5e-15 86.7 57 70.2
BolSC49t61206H Brassica oleracea HOM05D004473 ORTHO05D005652 9.4e-15 85.9 122 45.1
MD15G1438900 Malus domestica HOM05D004473 ORTHO05D005652 4.7e-14 83.6 65 67.7
Thhalv10028154m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 8.0e-14 82.8 191 33.5
Gorai.003G179600 Gossypium raimondii HOM05D004473 ORTHO05D005652 3.3e-12 77.4 57 63.2
FAN24G2630 Fragaria x ananassa HOM05D004473 ORTHO05D005652 4.4e-12 77.0 84 50.0
Nn020s41490 Nelumbo nucifera HOM05D004473 ORTHO05D005652 4.4e-12 77.0 56 67.9
Lalb_Chr13g0292931 Lupinus albus HOM05D004473 ORTHO05D005652 5.7e-12 76.6 82 50.0
Os11g0517350 Oryza sativa ssp. japonica HOM05D004473 ORTHO05D005652 4.8e-11 73.6 62 56.5
MELO3C000879.2 Cucumis melo HOM05D004473 ORTHO05D005652 4.1e-10 70.5 56 64.3
MELO3C027497.2 Cucumis melo HOM05D004473 ORTHO05D005652 4.1e-10 70.5 56 64.3
Oeu062869.1 Olea europaea HOM05D004473 ORTHO05D005652 7.0e-10 69.7 56 58.9
AUR62037881 Chenopodium quinoa HOM05D001387 ORTHO05D001250 2.6e-09 67.8 42 73.8
Manes.10G075803 Manihot esculenta HOM05D004473 ORTHO05D005652 2.6e-09 67.8 54 63.0
BraSC58t46474Z Brassica rapa HOM05D004473 ORTHO05D005652 1.0e-08 65.9 49 55.1
TPR.G16230 Trifolium pratense HOM05D004473 ORTHO05D005652 1.0e-08 65.9 78 50.0
TPR.G7920 Trifolium pratense HOM05D004473 ORTHO05D005652 7.2e-07 59.7 64 60.9
Oeu051131.1 Olea europaea HOM05D000388 ORTHO05D004227 1.2e-06 58.9 56 55.4
CSS0010292 Camellia sinensis var. sinensis HOM05D004473 ORTHO05D005652 2.1e-06 58.2 34 76.5
Gorai.006G008300 Gossypium raimondii HOM05D004473 ORTHO05D005652 2.1e-06 58.2 95 38.9
Oeu020582.1 Olea europaea HOM05D004473 ORTHO05D005652 3.6e-06 57.4 34 70.6
GSVIVG01020677001 Vitis vinifera HOM05D004473 ORTHO05D005652 6.1e-06 56.6 34 70.6


User provided reference genes

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