Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund10205 Selenicereus undatus HOM05D004694 ORTHO05D006576 9.9e-166 586.6 284 100.0
Actinidia08860 Actinidia chinensis HOM05D004694 ORTHO05D006576 2.6e-129 465.7 302 75.2
EL10As4g23460 Beta vulgaris HOM05D004694 ORTHO05D006576 1.3e-128 463.4 350 66.3
arahy.Tifrunner.gnm1.ann1.EW3HTN Arachis hypogaea HOM05D004694 ORTHO05D006576 6.3e-128 461.1 351 67.8
arahy.Tifrunner.gnm1.ann1.J1V7G3 Arachis hypogaea HOM05D004694 ORTHO05D006576 8.2e-128 460.7 351 67.8
AUR62029660 Chenopodium quinoa HOM05D004694 ORTHO05D006576 8.2e-128 460.7 351 66.4
arahy.Tifrunner.gnm1.ann1.C9ULKZ Arachis hypogaea HOM05D004694 ORTHO05D006576 1.1e-127 460.3 351 67.5
arahy.Tifrunner.gnm1.ann1.18QE6Y Arachis hypogaea HOM05D004694 ORTHO05D006576 1.8e-127 459.5 351 67.8
Eucgr.K02748 Eucalyptus grandis HOM05D004694 ORTHO05D006576 1.8e-127 459.5 354 67.2
Dinv04852 Davidia involucrata HOM05D004694 ORTHO05D006576 4.1e-127 458.4 355 68.2
AUR62025866 Chenopodium quinoa HOM05D004694 ORTHO05D006576 9.1e-127 457.2 351 65.8
QL10p004544 Quercus lobata HOM05D004694 ORTHO05D006576 1.2e-126 456.8 355 68.2
arahy.Tifrunner.gnm1.ann1.HVKI9W Arachis hypogaea HOM05D004694 ORTHO05D006576 1.5e-126 456.4 351 67.5
Thecc.03G124900 Theobroma cacao HOM05D004694 ORTHO05D006576 1.5e-126 456.4 332 70.2
CSS0001791 Camellia sinensis var. sinensis HOM05D004694 ORTHO05D006576 2.6e-126 455.7 352 67.6
Rhsim12G0172800 Rhododendron simsii HOM05D004694 ORTHO05D006576 3.5e-126 455.3 345 66.7
Gorai.001G060900 Gossypium raimondii HOM05D004694 ORTHO05D006576 4.5e-126 454.9 332 70.2
HanXRQChr05g0154041 Helianthus annuus HOM05D004694 ORTHO05D006576 4.5e-126 454.9 354 67.5
ClCG03G003600 Citrullus lanatus HOM05D004694 ORTHO05D006576 5.9e-126 454.5 347 66.9
vmacro16662 Vaccinium macrocarpon HOM05D004694 ORTHO05D006576 5.9e-126 454.5 343 66.8
CiPaw.11G010700 Carya illinoinensis HOM05D004694 ORTHO05D006576 7.7e-126 454.1 356 66.9
Gohir.A07G053000 Gossypium hirsutum HOM05D004694 ORTHO05D006576 7.7e-126 454.1 332 69.9
Medtr8g028225 Medicago truncatula HOM05D004694 ORTHO05D006576 1.0e-125 453.8 351 66.7
Gohir.D07G057400 Gossypium hirsutum HOM05D004694 ORTHO05D006576 1.3e-125 453.4 332 69.9
Cfa018868 Carpinus fangiana HOM05D004694 ORTHO05D006576 1.7e-125 453.0 333 69.7
Lsat_1_v5_gn_5_13501 Lactuca sativa HOM05D004694 ORTHO05D006576 1.7e-125 453.0 356 66.9
Lalb_Chr07g0183271 Lupinus albus HOM05D004694 ORTHO05D006576 3.8e-125 451.8 351 65.5
VMungo1215G0651 Vigna mungo HOM05D004694 ORTHO05D006576 3.8e-125 451.8 332 69.3
Potri.015G092000 Populus trichocarpa HOM05D004694 ORTHO05D006576 5.0e-125 451.4 351 67.0
MELO3C002350.2 Cucumis melo HOM05D004694 ORTHO05D006576 6.5e-125 451.1 348 66.4
Lj4g0028142 Lotus japonicus HOM05D004694 ORTHO05D006576 6.5e-125 451.1 352 66.5
Cc04_g10080 Coffea canephora HOM05D004694 ORTHO05D006576 1.1e-124 450.3 339 67.0
TAR622G1078 Trochodendron aralioides HOM05D004694 ORTHO05D006576 1.1e-124 450.3 332 68.7
Glyma.17G128000 Glycine max HOM05D004694 ORTHO05D006576 1.5e-124 449.9 351 66.1
CsaV3_1G009520 Cucumis sativus L. HOM05D004694 ORTHO05D006576 1.9e-124 449.5 348 66.1
DCAR_016413 Daucus carota HOM05D004694 ORTHO05D006576 1.9e-124 449.5 345 66.4
Sc14g0007560 Simmondsia chinensis HOM05D004694 ORTHO05D006576 1.9e-124 449.5 349 66.2
Hma1.2p1_0014F.1_g009775 Hydrangea macrophylla HOM05D004694 ORTHO05D006576 2.5e-124 449.1 355 65.1
Aqoxy3G01456 Aquilegia oxysepala HOM05D004694 ORTHO05D006576 3.2e-124 448.7 354 66.4
Nitab4.5_0001664g0050 Nicotiana tabacum HOM05D004694 ORTHO05D006576 3.2e-124 448.7 334 67.7
MD06G1147700 Malus domestica HOM05D004694 ORTHO05D006576 4.2e-124 448.4 334 68.9
Duzib205G1411 Durio zibethinus HOM05D004694 ORTHO05D006576 5.5e-124 448.0 332 69.3
THA.LOC104825008 Tarenaya hassleriana HOM05D004694 ORTHO05D006576 5.5e-124 448.0 332 68.7
TPR.G21293 Trifolium pratense HOM05D004694 ORTHO05D006576 5.5e-124 448.0 351 65.8
TWI39G0550 Tripterygium wilfordii HOM05D004694 ORTHO05D006576 9.4e-124 447.2 345 67.0
CAN.G352.42 Capsicum annuum HOM05D004694 ORTHO05D006576 1.2e-123 446.8 334 67.1
Lj5C97G9 Lonicera japonica HOM05D004694 ORTHO05D006576 2.1e-123 446.0 343 66.2
Prupe.5G154600 Prunus persica HOM05D004694 ORTHO05D006576 2.1e-123 446.0 357 65.0
Peaxi162Scf00089g00419 Petunia axillaris HOM05D004694 ORTHO05D006576 2.7e-123 445.7 338 66.3
BolC2t06123H Brassica oleracea HOM05D004694 ORTHO05D006576 4.7e-123 444.9 350 65.7
PSO017G1181 Papaver somniferum HOM05D004694 ORTHO05D006576 6.1e-123 444.5 345 65.5
PSO478G2802 Papaver somniferum HOM05D004694 ORTHO05D006576 6.1e-123 444.5 345 65.2
Sed0009275 Sechium edule HOM05D004694 ORTHO05D006576 6.1e-123 444.5 333 67.0
FAN08G1582 Fragaria x ananassa HOM05D004694 ORTHO05D006576 1.0e-122 443.7 350 65.1
FAN18G1141 Fragaria x ananassa HOM05D004694 ORTHO05D006576 1.0e-122 443.7 353 64.9
BraA02t04789Z Brassica rapa HOM05D004694 ORTHO05D006576 1.4e-122 443.4 350 65.7
Nitab4.5_0003680g0030 Nicotiana tabacum HOM05D004694 ORTHO05D006576 1.4e-122 443.4 334 67.1
FvH4_5g07710 Fragaria vesca HOM05D004694 ORTHO05D006576 1.8e-122 443.0 353 64.9
FAN04G1296 Fragaria x ananassa HOM05D004694 ORTHO05D006576 1.8e-122 443.0 350 65.1
MSTRG.9318 Avicennia marina HOM05D004694 ORTHO05D006576 2.3e-122 442.6 332 67.2
Ciclev10019499m.g Citrus clementina HOM05D004694 ORTHO05D006576 2.3e-122 442.6 332 68.7
PGR044G1202 Punica granatum HOM05D004694 ORTHO05D006576 2.3e-122 442.6 351 66.1
AT5G03860 Arabidopsis thaliana HOM05D004694 ORTHO05D006576 3.0e-122 442.2 350 65.4
AL6G13430 Arabidopsis lyrata HOM05D004694 ORTHO05D006576 4.0e-122 441.8 350 64.9
Sopen03g030290 Solanum pennellii HOM05D004694 ORTHO05D006576 4.0e-122 441.8 334 66.8
Solyc03g111140.3 Solanum lycopersicum HOM05D004694 ORTHO05D006576 5.2e-122 441.4 334 66.5
SGA_v2.0_scaffold80G25701 Striga asiatica HOM05D004694 ORTHO05D006576 5.2e-122 441.4 335 66.9
ECA246G0215 Erigeron canadensis HOM05D004694 ORTHO05D006576 6.7e-122 441.0 358 64.2
Atru.chr9.1027_Atru.chr9.1028 Acer truncatum HOM05D004694 ORTHO05D006576 1.5e-121 439.9 333 67.9
BcaB05g21798 Brassica carinata HOM05D004694 ORTHO05D006576 1.5e-121 439.9 358 64.0
MBI11_g05409_MAGBIO Magnolia biondii HOM05D004694 ORTHO05D006576 1.5e-121 439.9 331 66.8
Solyc03g111130.1 Solanum lycopersicum HOM05D004694 ORTHO05D006576 2.0e-121 439.5 334 66.2
Aa31LG1G21410 Aethionema arabicum HOM05D004694 ORTHO05D006576 2.6e-121 439.1 350 64.9
Sp6g38870 Schrenkiella parvula HOM05D004694 ORTHO05D006576 2.6e-121 439.1 350 64.6
Migut.I00493 Erythranthe guttata HOM05D004694 ORTHO05D006576 3.3e-121 438.7 334 66.5
Thhalv10015335m.g Eutrema salsugineum HOM05D004694 ORTHO05D006576 3.3e-121 438.7 350 64.3
Nn4g22401 Nelumbo nucifera HOM05D004694 ORTHO05D006576 3.3e-121 438.7 333 67.0
RcHm_v2.0_Chr7g0190721 Rosa chinensis HOM05D004694 ORTHO05D006576 3.3e-121 438.7 358 63.7
PGSC0003DMG400015192 Solanum tuberosum HOM05D004694 ORTHO05D006576 1.3e-120 436.8 334 66.2
CANSAT11G0344 Cannabis sativa HOM05D004694 ORTHO05D006576 1.7e-120 436.4 355 63.4
C02p01580 Brassica napus HOM05D004694 ORTHO05D006576 2.2e-120 436.0 350 64.9
CARHR209400 Cardamine hirsuta HOM05D004694 ORTHO05D006576 2.2e-120 436.0 350 64.0
Sopen03g030280 Solanum pennellii HOM05D004694 ORTHO05D006576 2.2e-120 436.0 334 65.6
CAN.G352.43 Capsicum annuum HOM05D004694 ORTHO05D006576 8.2e-120 434.1 334 65.0
Phvul.003G209200 Phaseolus vulgaris HOM05D004694 ORTHO05D006576 1.1e-119 433.7 345 64.9
VMungo1215G1303 Vigna mungo HOM05D004694 ORTHO05D006576 1.1e-119 433.7 332 66.9
SalBow5G3571 Salvia bowleyana HOM05D004694 ORTHO05D006576 1.4e-119 433.3 334 65.9
Carub.0006s0280 Capsella rubella HOM05D004694 ORTHO05D006576 1.8e-119 433.0 350 64.3
Sabra15G0113800 Salix brachista HOM05D004694 ORTHO05D006576 4.1e-119 431.8 352 64.2
unitig_21.g20324 Utricularia gibba HOM05D004694 ORTHO05D006576 1.6e-118 429.9 334 66.2
Sopen03g030270 Solanum pennellii HOM05D004694 ORTHO05D006576 5.9e-118 427.9 334 64.1
CDE09G0730 Ceratophyllum demersum HOM05D004694 ORTHO05D006576 1.7e-117 426.4 332 65.7
PGSC0003DMG400015194 Solanum tuberosum HOM05D004694 ORTHO05D006576 1.7e-117 426.4 334 63.8
Ah.11g044960 Amaranthus hybridus HOM05D004694 ORTHO05D006576 3.8e-117 425.2 332 64.5
Actinidia36796 Actinidia chinensis HOM05D004694 ORTHO05D006576 5.0e-117 424.9 264 79.2
arahy.Tifrunner.gnm1.ann1.U91AM5 Arachis hypogaea HOM05D004694 ORTHO05D006576 1.6e-115 419.9 354 63.0
Glyma.05G045900 Glycine max HOM05D004694 ORTHO05D006576 6.1e-115 417.9 332 63.6
COL.COLO4_28061 Corchorus olitorius HOM05D004694 ORTHO05D006576 8.0e-115 417.5 283 74.9
Glyma.17G128100 Glycine max HOM05D004694 ORTHO05D006576 1.4e-114 416.8 332 63.6
GSVIVG01008494001 Vitis vinifera HOM05D004694 ORTHO05D006576 3.0e-114 415.6 351 63.8
ATR0824G173 Amborella trichopoda HOM05D004694 ORTHO05D006576 2.4e-111 406.0 360 59.2
SalBow1G3673 Salvia bowleyana HOM05D004694 ORTHO05D006576 4.5e-110 401.7 324 62.3
SalBow1G5430 Salvia bowleyana HOM05D004694 ORTHO05D006576 4.5e-110 401.7 324 62.3
HPP92_023361 Vanilla planifolia HOM05D004694 ORTHO05D006576 1.9e-108 396.4 332 61.4
Oeu044618.1 Olea europaea HOM05D004694 ORTHO05D006576 1.6e-107 393.3 315 65.4
Zm00001eb079170 Zea mays HOM05D004694 ORTHO05D006576 4.0e-106 388.7 333 61.3
FAN13G0009 Fragaria x ananassa HOM05D004694 ORTHO05D006576 5.7e-105 384.8 344 59.3
Cpa.g.sc4.107 Carica papaya HOM05D004694 ORTHO05D006576 1.3e-104 383.6 332 60.8
Haze_07250 Corylus avellana HOM05D004694 ORTHO05D006576 3.1e-103 379.0 288 68.4
Ca_23552_v3 Cicer arietinum L. HOM05D004694 ORTHO05D006576 5.4e-103 378.3 356 57.9
Os04g0486950 Oryza sativa ssp. japonica HOM05D004694 ORTHO05D006576 5.9e-102 374.8 339 59.6
SEGI_27575 Sequoiadendron giganteum HOM05D004694 ORTHO05D006576 5.9e-102 374.8 330 57.6
Pp3c20_22510 Physcomitrium patens HOM05D004694 ORTHO05D006576 4.3e-100 368.6 329 55.0
SMO367G0555 Selaginella moellendorffii HOM05D004694 ORTHO05D006576 2.2e-96 356.3 331 55.3
SalBow1G1465 Salvia bowleyana HOM05D004694 ORTHO05D006576 3.2e-95 352.4 323 55.7
SalBow1G5822 Salvia bowleyana HOM05D004694 ORTHO05D006576 3.2e-95 352.4 323 55.7
Mapoly0154s0035 Marchantia polymorpha HOM05D004694 ORTHO05D006576 1.6e-94 350.1 329 54.1
CBR_g26132 Chara braunii HOM05D004694 ORTHO05D006576 9.5e-92 340.9 328 53.0
CDE08G1017 Ceratophyllum demersum HOM05D004694 ORTHO05D006576 3.4e-89 332.4 296 59.5
AagrBONN_evm.TU.Sc2ySwM_117.2387 Anthoceros agrestis HOM05D004694 ORTHO05D006576 2.9e-88 329.3 325 52.0
AagrBONN_evm.TU.Sc2ySwM_228.3843 Anthoceros agrestis HOM05D004694 ORTHO05D006576 1.0e-85 320.9 330 50.6
TAR374G0737 Trochodendron aralioides HOM05D004694 ORTHO05D002940 8.9e-82 307.8 289 59.2
Ca_23555_v3 Cicer arietinum L. HOM05D004694 ORTHO05D006576 2.3e-77 293.1 326 51.5
Dinv11097 Davidia involucrata HOM05D004694 ORTHO05D006576 4.7e-75 285.4 235 64.3
Cre03.g144807 Chlamydomonas reinhardtii HOM05D004694 ORTHO05D006576 9.9e-65 251.1 326 42.9
Manes.14G054100 Manihot esculenta HOM05D004694 ORTHO05D006576 3.9e-61 239.2 207 61.8
QL10p004639 Quercus lobata HOM05D004694 ORTHO05D006576 1.5e-57 227.3 207 59.9
Psat4g158240 Pisum sativum HOM05D004694 ORTHO05D006576 4.9e-56 222.2 112 92.9
Phvul.003G209101 Phaseolus vulgaris HOM05D004694 ORTHO05D006576 5.4e-55 218.8 112 91.1
Potri.012G094532 Populus trichocarpa HOM05D004694 ORTHO05D006576 1.6e-54 217.2 130 80.8
arahy.Tifrunner.gnm1.ann1.0V01Q6 Arachis hypogaea HOM05D004694 ORTHO05D006576 3.1e-50 203.0 130 75.4
BcaB01g05780 Brassica carinata HOM05D004694 ORTHO05D006576 2.6e-49 199.9 168 60.1
SalBow1G0618 Salvia bowleyana HOM05D004694 ORTHO05D006576 1.9e-47 193.7 118 74.6
Ca_29801_v3 Cicer arietinum L. HOM05D004694 ORTHO05D006576 1.1e-44 184.5 134 67.2
HPP92_023371 Vanilla planifolia HOM05D004694 ORTHO05D006576 1.5e-41 174.1 128 68.0
SalBow1G0228 Salvia bowleyana HOM05D004694 ORTHO05D006576 1.7e-40 170.6 114 71.9
PGSC0003DMG401015193 Solanum tuberosum HOM05D004694 ORTHO05D006576 3.7e-35 152.9 74 90.5
AagrBONN_evm.TU.Sc2ySwM_344.4962 Anthoceros agrestis HOM05D004694 ORTHO05D006576 3.1e-34 149.8 334 32.0
arahy.Tifrunner.gnm1.ann1.SX4PQT Arachis hypogaea HOM05D004694 ORTHO05D006576 6.9e-34 148.7 75 89.3
AUR62040389 Chenopodium quinoa HOM05D003382 ORTHO05D003930 7.2e-23 112.1 68 77.9
Ca_28596_v3 Cicer arietinum L. HOM05D004694 ORTHO05D148954 9.4e-23 111.7 118 48.3
MD14G1161700 Malus domestica HOM05D004694 ORTHO05D248771 1.4e-21 107.8 66 80.3
SalBow1G3079 Salvia bowleyana HOM05D004694 ORTHO05D006576 1.4e-21 107.8 86 60.5
Duzib068G0556 Durio zibethinus HOM05D004694 ORTHO05D006576 9.7e-12 75.1 41 82.9
VMungo1383G1618 Vigna mungo HOM05D004694 ORTHO05D046692 3.1e-10 70.1 92 48.9


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