Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund09880 Selenicereus undatus HOM05D006748 ORTHO05D008553 7.9e-58 226.9 113 100.0
Hund02598 Selenicereus undatus HOM05D006748 ORTHO05D008553 3.6e-42 174.9 105 81.0
Eucgr.K02517 Eucalyptus grandis HOM05D006748 ORTHO05D008553 1.0e-41 173.3 104 81.7
Actinidia35032 Actinidia chinensis HOM05D006748 ORTHO05D008553 6.8e-41 170.6 107 78.5
CSS0043022 Camellia sinensis var. sinensis HOM05D006748 ORTHO05D008553 1.5e-40 169.5 108 75.9
AL6G18300 Arabidopsis lyrata HOM05D006748 ORTHO05D008553 7.5e-40 167.2 107 77.6
Cfa019312 Carpinus fangiana HOM05D006748 ORTHO05D008553 2.2e-39 165.6 103 78.6
Gohir.A12G181700 Gossypium hirsutum HOM05D006748 ORTHO05D008553 2.2e-39 165.6 103 78.6
Gohir.D12G184500 Gossypium hirsutum HOM05D006748 ORTHO05D008553 2.2e-39 165.6 103 78.6
Gorai.008G197900 Gossypium raimondii HOM05D006748 ORTHO05D008553 2.2e-39 165.6 103 78.6
Potri.015G056300 Populus trichocarpa HOM05D006748 ORTHO05D008553 2.2e-39 165.6 103 77.7
Thecc.03G099400 Theobroma cacao HOM05D006748 ORTHO05D008553 2.2e-39 165.6 103 77.7
Carub.0006s0686 Capsella rubella HOM05D006748 ORTHO05D008553 3.7e-39 164.9 107 76.6
Potri.012G065500 Populus trichocarpa HOM05D006748 ORTHO05D008553 3.7e-39 164.9 104 76.9
BcaB05g21592 Brassica carinata HOM05D006748 ORTHO05D008553 4.8e-39 164.5 107 75.7
Haze_07696 Corylus avellana HOM05D006748 ORTHO05D008553 4.8e-39 164.5 103 78.6
Dinv10524 Davidia involucrata HOM05D006748 ORTHO05D008553 4.8e-39 164.5 106 74.5
AT5G07960 Arabidopsis thaliana HOM05D006748 ORTHO05D008553 6.3e-39 164.1 107 76.6
THA.LOC104818341 Tarenaya hassleriana HOM05D006748 ORTHO05D008553 6.3e-39 164.1 107 76.6
CiPaw.12G007800 Carya illinoinensis HOM05D006748 ORTHO05D008553 1.4e-38 162.9 103 79.6
Aa31LG3G18570 Aethionema arabicum HOM05D006748 ORTHO05D008553 1.8e-38 162.5 107 75.7
CARHR205230 Cardamine hirsuta HOM05D006748 ORTHO05D008553 1.8e-38 162.5 107 75.7
TAR622G0828 Trochodendron aralioides HOM05D006748 ORTHO05D008553 1.8e-38 162.5 106 68.9
Duzib084G0059 Durio zibethinus HOM05D006748 ORTHO05D008553 2.4e-38 162.2 103 75.7
Thhalv10015079m.g Eutrema salsugineum HOM05D006748 ORTHO05D008553 2.4e-38 162.2 107 74.8
BcaC06g32512 Brassica carinata HOM05D006748 ORTHO05D008553 3.1e-38 161.8 107 74.8
Sed0010236 Sechium edule HOM05D006748 ORTHO05D008553 3.1e-38 161.8 96 79.2
PSO541G5074 Papaver somniferum HOM05D006748 ORTHO05D008553 4.1e-38 161.4 103 74.8
PSO675G4773 Papaver somniferum HOM05D006748 ORTHO05D008553 4.1e-38 161.4 103 74.8
QL10p019141 Quercus lobata HOM05D006748 ORTHO05D008553 4.1e-38 161.4 106 73.6
C09p68960 Brassica napus HOM05D006748 ORTHO05D008553 5.4e-38 161.0 107 74.8
Manes.06G086100 Manihot esculenta HOM05D006748 ORTHO05D008553 5.4e-38 161.0 106 72.6
ClCG06G015720 Citrullus lanatus HOM05D006748 ORTHO05D008553 7.0e-38 160.6 95 80.0
BcaC03g13204 Brassica carinata HOM05D006748 ORTHO05D008553 1.6e-37 159.5 104 75.0
C02p03380 Brassica napus HOM05D006748 ORTHO05D008553 1.6e-37 159.5 104 75.0
BolC2t06300H Brassica oleracea HOM05D006748 ORTHO05D008553 1.6e-37 159.5 104 75.0
PGR044G1724 Punica granatum HOM05D006748 ORTHO05D008553 1.6e-37 159.5 103 77.7
BraA02t04939Z Brassica rapa HOM05D006748 ORTHO05D008553 2.0e-37 159.1 104 75.0
SGA_v2.0_scaffold49G18162 Striga asiatica HOM05D006748 ORTHO05D008553 2.0e-37 159.1 97 81.4
Nn3g17423 Nelumbo nucifera HOM05D006748 ORTHO05D008553 3.5e-37 158.3 102 71.6
Ca_18978_v3 Cicer arietinum L. HOM05D006748 ORTHO05D008553 5.9e-37 157.5 96 75.0
Sp6g34980 Schrenkiella parvula HOM05D006748 ORTHO05D008553 5.9e-37 157.5 101 76.2
CsaV3_1G002810 Cucumis sativus L. HOM05D006748 ORTHO05D008553 1.0e-36 156.8 95 77.9
Hma1.2p1_0060F.1_g033230 Hydrangea macrophylla HOM05D006748 ORTHO05D008553 1.0e-36 156.8 102 74.5
Psat5g203080 Pisum sativum HOM05D006748 ORTHO05D008553 1.0e-36 156.8 96 74.0
BolC9t59641H Brassica oleracea HOM05D006748 ORTHO05D008553 1.7e-36 156.0 107 72.9
GSVIVG01007891001 Vitis vinifera HOM05D006748 ORTHO05D008553 1.7e-36 156.0 111 69.4
TWI60G0647 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 2.2e-36 155.6 106 72.6
TPR.G12215 Trifolium pratense HOM05D006748 ORTHO05D008553 3.8e-36 154.8 96 72.9
MSTRG.22979 Avicennia marina HOM05D006748 ORTHO05D008553 5.0e-36 154.5 89 85.4
Migut.I00325 Erythranthe guttata HOM05D006748 ORTHO05D008553 5.0e-36 154.5 99 79.8
Glyma.06G201800 Glycine max HOM05D006748 ORTHO05D008553 5.0e-36 154.5 92 77.2
Lj5A105G56 Lonicera japonica HOM05D006748 ORTHO05D008553 5.0e-36 154.5 103 72.8
Phvul.009G193300 Phaseolus vulgaris HOM05D006748 ORTHO05D008553 5.0e-36 154.5 93 75.3
Cpa.g.sc94.24 Carica papaya HOM05D006748 ORTHO05D008553 6.5e-36 154.1 99 74.7
Cc10_g05660 Coffea canephora HOM05D006748 ORTHO05D008553 6.5e-36 154.1 95 78.9
EL10Ac5g11112 Beta vulgaris HOM05D006748 ORTHO05D008553 8.5e-36 153.7 98 77.6
Oeu008258.1 Olea europaea HOM05D006748 ORTHO05D008553 1.1e-35 153.3 89 83.1
SHI30118 Sapria himalayana HOM05D006748 ORTHO05D008553 1.1e-35 153.3 91 80.2
Ciclev10023002m.g Citrus clementina HOM05D006748 ORTHO05D008553 1.5e-35 152.9 102 74.5
CANSAT80G2841 Cannabis sativa HOM05D006748 ORTHO05D008553 1.9e-35 152.5 107 72.0
TWI81G0385 Tripterygium wilfordii HOM05D006748 ORTHO05D008553 3.2e-35 151.8 106 70.8
Lj1g0012744 Lotus japonicus HOM05D006748 ORTHO05D008553 5.5e-35 151.0 92 73.9
Solyc06g069520.3 Solanum lycopersicum HOM05D006748 ORTHO05D008553 2.1e-34 149.1 88 80.7
Sopen06g026810 Solanum pennellii HOM05D006748 ORTHO05D008553 2.1e-34 149.1 88 80.7
Actinidia19003 Actinidia chinensis HOM05D006748 ORTHO05D008553 2.8e-34 148.7 151 56.3
Lalb_Chr16g0391551 Lupinus albus HOM05D006748 ORTHO05D008553 2.8e-34 148.7 103 68.0
Medtr3g024170 Medicago truncatula HOM05D006748 ORTHO05D008553 2.8e-34 148.7 92 70.7
Medtr3g024190 Medicago truncatula HOM05D006748 ORTHO05D008553 2.8e-34 148.7 92 70.7
Sed0016176 Sechium edule HOM05D006748 ORTHO05D008553 6.1e-34 147.5 95 73.7
Lalb_Chr09g0334301 Lupinus albus HOM05D006748 ORTHO05D008553 8.0e-34 147.1 93 71.0
Atru.chr9.414 Acer truncatum HOM05D006748 ORTHO05D008553 1.8e-33 146.0 96 75.0
unitig_750.g28509 Utricularia gibba HOM05D006748 ORTHO05D008553 1.8e-33 146.0 89 78.7
Os03g0756800 Oryza sativa ssp. japonica HOM05D006748 ORTHO05D008553 3.0e-33 145.2 96 69.8
FvH4_5g14060 Fragaria vesca HOM05D006748 ORTHO05D008553 6.8e-33 144.1 94 73.4
FAN13G1579 Fragaria x ananassa HOM05D006748 ORTHO05D008553 6.8e-33 144.1 94 73.4
MD14G1210100 Malus domestica HOM05D006748 ORTHO05D008553 6.8e-33 144.1 98 70.4
Sc12g0006600 Simmondsia chinensis HOM05D006748 ORTHO05D008553 8.8e-33 143.7 84 84.5
FvH4_5g14160 Fragaria vesca HOM05D006748 ORTHO05D008553 1.2e-32 143.3 94 73.4
Lsat_1_v5_gn_1_13560 Lactuca sativa HOM05D006748 ORTHO05D008553 1.2e-32 143.3 97 68.0
QL09p026979 Quercus lobata HOM05D006748 ORTHO05D008553 1.2e-32 143.3 138 55.8
Zm00001eb057720 Zea mays HOM05D006748 ORTHO05D008553 1.5e-32 142.9 92 71.7
ECA247G1600 Erigeron canadensis HOM05D006748 ORTHO05D008553 2.0e-32 142.5 97 68.0
Peaxi162Scf00702g00422 Petunia axillaris HOM05D006748 ORTHO05D008553 2.0e-32 142.5 88 78.4
MD06G1200600 Malus domestica HOM05D006748 ORTHO05D008553 2.6e-32 142.1 98 69.4
RcHm_v2.0_Chr7g0182761 Rosa chinensis HOM05D006748 ORTHO05D008553 2.6e-32 142.1 101 67.3
Nitab4.5_0005160g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 3.4e-32 141.7 88 77.3
Nitab4.5_0011867g0020 Nicotiana tabacum HOM05D006748 ORTHO05D008553 3.4e-32 141.7 88 77.3
HanXRQChr02g0044721 Helianthus annuus HOM05D006748 ORTHO05D008553 5.7e-32 141.0 97 69.1
vmacro16507 Vaccinium macrocarpon HOM05D006748 ORTHO05D008553 5.7e-32 141.0 88 78.4
HPP92_019473 Vanilla planifolia HOM05D006748 ORTHO05D008553 2.8e-31 138.7 92 71.7
SGA_v2.0_scaffold25G10944 Striga asiatica HOM05D006748 ORTHO05D008553 4.9e-31 137.9 77 85.7
Rhsim12G0151700 Rhododendron simsii HOM05D006748 ORTHO05D008553 1.1e-30 136.7 88 77.3
Manes.14G084550 Manihot esculenta HOM05D006748 ORTHO05D008553 4.5e-29 131.3 87 72.4
arahy.Tifrunner.gnm1.ann1.HPW464 Arachis hypogaea HOM05D006748 ORTHO05D008553 5.9e-29 131.0 86 73.3
SMO201G0125 Selaginella moellendorffii HOM05D006748 ORTHO05D008553 7.8e-29 130.6 91 64.8
VMungo1309G2295 Vigna mungo HOM05D006748 ORTHO05D008553 1.3e-28 129.8 77 79.2
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 3.8e-28 128.3 87 67.8
AUR62008510 Chenopodium quinoa HOM05D006748 ORTHO05D008553 7.3e-27 124.0 79 75.9
AUR62021580 Chenopodium quinoa HOM05D006748 ORTHO05D008553 9.5e-27 123.6 77 77.9
Mapoly0019s0070 Marchantia polymorpha HOM05D006748 ORTHO05D008553 4.7e-26 121.3 92 59.8
CDE05G0122 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 5.2e-25 117.9 103 59.2
CBR_g90015 Chara braunii HOM05D006748 ORTHO05D008553 2.9e-23 112.1 90 55.6
Pp3c14_26790 Physcomitrium patens HOM05D006748 ORTHO05D008553 2.9e-23 112.1 95 56.8
HPP92_006054 Vanilla planifolia HOM05D006748 ORTHO05D008553 2.9e-23 112.1 88 60.2
Sabra15G0081500 Salix brachista HOM05D006748 ORTHO05D008553 3.7e-23 111.7 98 61.2
ATR0064G062 Amborella trichopoda HOM05D006748 ORTHO05D008553 1.6e-21 106.3 74 67.6
BraA10t44914Z Brassica rapa HOM05D006748 ORTHO05D008553 3.0e-20 102.1 57 82.5
AagrBONN_evm.TU.Sc2ySwM_117.1931 Anthoceros agrestis HOM05D006748 ORTHO05D008553 1.9e-19 99.4 73 63.0
HanXRQChr16g0510351 Helianthus annuus HOM05D006748 ORTHO05D008553 1.6e-18 96.3 68 67.6
A10p28650 Brassica napus HOM05D006748 ORTHO05D008553 2.1e-18 95.9 54 81.5
MELO3C017217.2 Cucumis melo HOM05D006748 ORTHO05D008553 1.1e-17 93.6 60 76.7
HanXRQChr14g0449601 Helianthus annuus HOM05D006748 ORTHO05D008553 7.0e-14 80.9 56 69.6
COL.COLO4_37587 Corchorus olitorius HOM05D006748 ORTHO05D008553 8.6e-12 73.9 53 67.9
CDE02G4382 Ceratophyllum demersum HOM05D006748 ORTHO05D008553 4.9e-07 58.2 57 50.9
SEGI_29622 Sequoiadendron giganteum HOM05D006748 ORTHO05D008553 4.9e-07 58.2 46 58.7


User provided reference genes

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