Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund09791 Selenicereus undatus HOM05D006678 ORTHO05D008388 3.4e-55 218.0 104 100.0
EL10Ac3g05077 Beta vulgaris HOM05D006678 ORTHO05D008388 9.6e-42 173.3 105 78.1
AUR62028176 Chenopodium quinoa HOM05D006678 ORTHO05D008388 1.3e-41 172.9 106 78.3
AUR62002062 Chenopodium quinoa HOM05D006678 ORTHO05D008388 8.1e-41 170.2 106 77.4
Atru.chr12.1964 Acer truncatum HOM05D006678 ORTHO05D008388 6.9e-40 167.2 104 73.1
SGA_v2.0_scaffold50G18440 Striga asiatica HOM05D006678 ORTHO05D008388 9.0e-40 166.8 103 77.7
Dinv17257 Davidia involucrata HOM05D006678 ORTHO05D008388 2.6e-39 165.2 106 75.5
Actinidia18705 Actinidia chinensis HOM05D006678 ORTHO05D008388 4.5e-39 164.5 106 75.5
Manes.09G127100 Manihot esculenta HOM05D006678 ORTHO05D008388 9.9e-39 163.3 104 74.0
Nitab4.5_0000021g0500 Nicotiana tabacum HOM05D006678 ORTHO05D008388 2.2e-38 162.2 106 71.7
VMungo1127G1968 Vigna mungo HOM05D006678 ORTHO05D008388 6.4e-38 160.6 105 75.2
Duzib177G0619 Durio zibethinus HOM05D006678 ORTHO05D008388 8.4e-38 160.2 100 76.0
Thecc.05G213400 Theobroma cacao HOM05D006678 ORTHO05D008388 8.4e-38 160.2 100 75.0
MD01G1236000 Malus domestica HOM05D006678 ORTHO05D008388 1.1e-37 159.8 105 75.2
Nitab4.5_0011186g0030 Nicotiana tabacum HOM05D006678 ORTHO05D008388 1.1e-37 159.8 106 71.7
Phvul.011G020300 Phaseolus vulgaris HOM05D006678 ORTHO05D008388 1.1e-37 159.8 105 74.3
CiPaw.06G032600 Carya illinoinensis HOM05D006678 ORTHO05D008388 1.4e-37 159.5 104 73.1
FvH4_7g33980 Fragaria vesca HOM05D006678 ORTHO05D008388 1.4e-37 159.5 105 73.3
FAN10G1380 Fragaria x ananassa HOM05D006678 ORTHO05D008388 1.9e-37 159.1 105 73.3
TWI39G0757 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 1.9e-37 159.1 105 75.2
Dinv29159 Davidia involucrata HOM05D006678 ORTHO05D008388 3.2e-37 158.3 106 72.6
QL09p024031 Quercus lobata HOM05D006678 ORTHO05D008388 3.2e-37 158.3 103 72.8
GSVIVG01024408001 Vitis vinifera HOM05D006678 ORTHO05D008388 3.2e-37 158.3 104 73.1
Gohir.D13G161000 Gossypium hirsutum HOM05D006678 ORTHO05D008388 4.2e-37 157.9 100 75.0
Gorai.013G181600 Gossypium raimondii HOM05D006678 ORTHO05D008388 4.2e-37 157.9 100 75.0
TWI38G1314 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 4.2e-37 157.9 105 74.3
FAN03G1679 Fragaria x ananassa HOM05D006678 ORTHO05D008388 5.4e-37 157.5 105 72.4
Glyma.12G017800 Glycine max HOM05D006678 ORTHO05D008388 5.4e-37 157.5 105 73.3
PGR042G1336 Punica granatum HOM05D006678 ORTHO05D008388 5.4e-37 157.5 112 71.4
unitig_90.g27534 Utricularia gibba HOM05D006678 ORTHO05D008388 5.4e-37 157.5 104 75.0
Gohir.A13G156100 Gossypium hirsutum HOM05D006678 ORTHO05D008388 7.1e-37 157.1 100 75.0
Lsat_1_v5_gn_9_47480 Lactuca sativa HOM05D006678 ORTHO05D008388 7.1e-37 157.1 98 74.5
Actinidia34306 Actinidia chinensis HOM05D006678 ORTHO05D008388 9.3e-37 156.8 108 70.4
Psat7g171800 Pisum sativum HOM05D006678 ORTHO05D008388 9.3e-37 156.8 107 72.0
Ciclev10023015m.g Citrus clementina HOM05D006678 ORTHO05D008388 1.2e-36 156.4 104 72.1
Medtr4g077807 Medicago truncatula HOM05D006678 ORTHO05D008388 1.2e-36 156.4 107 72.0
Ca_04918_v3 Cicer arietinum L. HOM05D006678 ORTHO05D008388 1.6e-36 156.0 107 72.0
Duzib106G0454 Durio zibethinus HOM05D006678 ORTHO05D008388 1.6e-36 156.0 100 74.0
Migut.F00948 Erythranthe guttata HOM05D006678 ORTHO05D008388 1.6e-36 156.0 103 71.8
Prupe.2G326100 Prunus persica HOM05D006678 ORTHO05D008388 2.1e-36 155.6 104 73.1
THA.LOC104827215 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 3.5e-36 154.8 104 72.1
COL.COLO4_11805 Corchorus olitorius HOM05D006678 ORTHO05D008388 4.6e-36 154.5 100 73.0
Sed0006085 Sechium edule HOM05D006678 ORTHO05D008388 4.6e-36 154.5 105 70.5
TPR.G27187 Trifolium pratense HOM05D006678 ORTHO05D008388 4.6e-36 154.5 107 71.0
HanXRQChr03g0088421 Helianthus annuus HOM05D006678 ORTHO05D008388 6.0e-36 154.1 108 71.3
Peaxi162Scf00133g00723 Petunia axillaris HOM05D006678 ORTHO05D008388 6.0e-36 154.1 104 72.1
Potri.013G082100 Populus trichocarpa HOM05D006678 ORTHO05D008388 6.0e-36 154.1 111 71.2
CARHR077080 Cardamine hirsuta HOM05D006678 ORTHO05D008388 7.9e-36 153.7 111 65.8
Hma1.2p1_1680F.1_g297200 Hydrangea macrophylla HOM05D006678 ORTHO05D008388 7.9e-36 153.7 109 70.6
Aa31LG5G13550 Aethionema arabicum HOM05D006678 ORTHO05D008388 1.0e-35 153.3 111 65.8
Thhalv10021803m.g Eutrema salsugineum HOM05D006678 ORTHO05D008388 1.0e-35 153.3 111 65.8
Solyc03g097010.3 Solanum lycopersicum HOM05D006678 ORTHO05D008388 1.0e-35 153.3 106 69.8
Sopen03g027760 Solanum pennellii HOM05D006678 ORTHO05D008388 1.0e-35 153.3 106 69.8
AT3G03070 Arabidopsis thaliana HOM05D006678 ORTHO05D008388 1.3e-35 152.9 111 65.8
RcHm_v2.0_Chr1g0384211 Rosa chinensis HOM05D006678 ORTHO05D008388 1.3e-35 152.9 106 67.9
FAN01G1466 Fragaria x ananassa HOM05D006678 ORTHO05D008388 1.8e-35 152.5 105 70.5
Oeu031704.1 Olea europaea HOM05D006678 ORTHO05D008388 1.8e-35 152.5 107 69.2
Sp3g02110 Schrenkiella parvula HOM05D006678 ORTHO05D008388 2.3e-35 152.1 112 65.2
vmacro06510 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 2.3e-35 152.1 116 66.4
MSTRG.26930 Avicennia marina HOM05D006678 ORTHO05D008388 3.0e-35 151.8 102 71.6
THA.LOC104802920 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 3.0e-35 151.8 104 71.2
TAR629G1392 Trochodendron aralioides HOM05D006678 ORTHO05D008388 3.0e-35 151.8 103 68.0
AL3G12580 Arabidopsis lyrata HOM05D006678 ORTHO05D008388 3.9e-35 151.4 111 64.9
Nn1g01909 Nelumbo nucifera HOM05D006678 ORTHO05D008388 5.1e-35 151.0 106 70.8
CANSAT21G1467 Cannabis sativa HOM05D006678 ORTHO05D008388 6.7e-35 150.6 104 69.2
Glyma.11G091800 Glycine max HOM05D006678 ORTHO05D008388 8.7e-35 150.2 110 70.9
Lj3g0002487 Lotus japonicus HOM05D006678 ORTHO05D008388 8.7e-35 150.2 113 69.9
Carub.0003s0222 Capsella rubella HOM05D006678 ORTHO05D008388 1.1e-34 149.8 111 64.0
Cc02_g00280 Coffea canephora HOM05D006678 ORTHO05D008388 1.1e-34 149.8 83 83.1
Aqoxy3G02158 Aquilegia oxysepala HOM05D006678 ORTHO05D008388 1.5e-34 149.4 75 88.0
ClCG02G007680 Citrullus lanatus HOM05D006678 ORTHO05D008388 1.5e-34 149.4 105 69.5
arahy.Tifrunner.gnm1.ann1.Z69A25 Arachis hypogaea HOM05D006678 ORTHO05D008388 1.9e-34 149.1 107 69.2
Rhsim03G0221400 Rhododendron simsii HOM05D006678 ORTHO05D008388 1.9e-34 149.1 108 69.4
CSS0031072 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 2.5e-34 148.7 117 65.0
Lalb_Chr03g0024411 Lupinus albus HOM05D006678 ORTHO05D008388 2.5e-34 148.7 102 69.6
Lalb_Chr01g0000921 Lupinus albus HOM05D006678 ORTHO05D008388 3.3e-34 148.3 103 68.9
CsaV3_2G036030 Cucumis sativus L. HOM05D006678 ORTHO05D008388 4.3e-34 147.9 105 69.5
CSS0016806 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 5.6e-34 147.5 79 82.3
MELO3C024729.2 Cucumis melo HOM05D006678 ORTHO05D008388 5.6e-34 147.5 105 69.5
DCAR_009010 Daucus carota HOM05D006678 ORTHO05D008388 5.6e-34 147.5 113 65.5
PSO782G5154 Papaver somniferum HOM05D006678 ORTHO05D008388 5.6e-34 147.5 90 75.6
BcaB04g21385 Brassica carinata HOM05D006678 ORTHO05D008388 7.4e-34 147.1 112 63.4
BolC5t35043H Brassica oleracea HOM05D006678 ORTHO05D008388 7.4e-34 147.1 113 63.7
C05p63740 Brassica napus HOM05D006678 ORTHO05D008388 1.6e-33 146.0 113 63.7
BolC1t05850H Brassica oleracea HOM05D006678 ORTHO05D008388 1.6e-33 146.0 112 64.3
PSO063G3868 Papaver somniferum HOM05D006678 ORTHO05D008388 1.6e-33 146.0 106 67.0
A05p44110 Brassica napus HOM05D006678 ORTHO05D008388 2.1e-33 145.6 113 62.8
BNapus_Darmor_BZH_scaffold_129p00040 Brassica napus HOM05D006678 ORTHO05D008388 2.1e-33 145.6 112 64.3
BraSC90t46700Z Brassica rapa HOM05D006678 ORTHO05D008388 2.1e-33 145.6 113 62.8
Sabra13G0070800 Salix brachista HOM05D006678 ORTHO05D008388 2.1e-33 145.6 114 66.7
ATR0829G044 Amborella trichopoda HOM05D006678 ORTHO05D008388 2.8e-33 145.2 107 69.2
BraA01t04595Z Brassica rapa HOM05D006678 ORTHO05D008388 8.1e-33 143.7 112 63.4
CDE06G2089 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 3.1e-32 141.7 98 68.4
SalBow2G2234 Salvia bowleyana HOM05D006678 ORTHO05D008388 4.0e-32 141.4 104 64.4
CDE03G0140 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 5.3e-32 141.0 102 66.7
Haze_00425 Corylus avellana HOM05D006877 ORTHO05D008735 1.3e-30 136.3 66 90.9
Gorai.013G182200 Gossypium raimondii HOM05D006678 ORTHO05D008388 2.9e-30 135.2 100 66.0
CAN.G1131.11 Capsicum annuum HOM05D006678 ORTHO05D008388 1.2e-28 129.8 66 84.8
Oeu063732.2 Olea europaea HOM05D006678 ORTHO05D008388 2.7e-28 128.6 160 48.1
Os08g0161700 Oryza sativa ssp. japonica HOM05D006678 ORTHO05D008388 3.5e-28 128.3 81 71.6
vmacro22173 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 3.5e-28 128.3 66 87.9
Zm00001eb172200 Zea mays HOM05D006678 ORTHO05D008388 1.8e-27 125.9 77 74.0
ECA232G0519 Erigeron canadensis HOM05D006678 ORTHO05D008388 5.1e-27 124.4 94 64.9
Nitab4.5_0000011g0100 Nicotiana tabacum HOM05D006678 ORTHO05D008388 1.1e-26 123.2 65 86.2
SEGI_28569 Sequoiadendron giganteum HOM05D006678 ORTHO05D008388 1.6e-25 119.4 62 87.1
Duzib128G0155 Durio zibethinus HOM05D006678 ORTHO05D008388 2.1e-25 119.0 63 87.3
AagrBONN_evm.TU.Sc2ySwM_368.1248 Anthoceros agrestis HOM05D006678 ORTHO05D008388 4.8e-25 117.9 71 70.4
SMO239G0055 Selaginella moellendorffii HOM05D006678 ORTHO05D008388 6.2e-25 117.5 71 71.8
Pp3c24_2620 Physcomitrium patens HOM05D006678 ORTHO05D008388 1.4e-24 116.3 72 72.2
Mapoly0006s0269 Marchantia polymorpha HOM05D006678 ORTHO05D008388 9.0e-24 113.6 75 64.0
Ah.13g072760 Amaranthus hybridus HOM05D006678 ORTHO05D008388 1.3e-22 109.8 65 80.0
Sc06g0002530 Simmondsia chinensis HOM05D002239 ORTHO05D002408 3.8e-22 108.2 68 75.0
Pp3c23_13320 Physcomitrium patens HOM05D006678 ORTHO05D008388 3.2e-21 105.1 75 66.7
PRCOL_00006130 Prasinoderma coloniale HOM05D006678 ORTHO05D008388 2.2e-17 92.4 77 59.7
Gohir.D13G160300 Gossypium hirsutum HOM05D006678 ORTHO05D008388 2.2e-14 82.4 63 65.1
arahy.Tifrunner.gnm1.ann1.GV73NI Arachis hypogaea HOM05D006678 ORTHO05D008388 6.5e-14 80.9 72 62.5
Cre03.g178250 Chlamydomonas reinhardtii HOM05D006678 ORTHO05D008388 1.9e-13 79.3 71 57.7
Zm00001eb415610 Zea mays HOM05D006678 ORTHO05D008388 1.1e-10 70.1 39 76.9
CBR_g6679 Chara braunii HOM05D006678 ORTHO05D008388 9.7e-10 67.0 35 80.0


User provided reference genes

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