Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Hund09789 Selenicereus undatus HOM05D007045 ORTHO05D008872 5.4e-55 217.6 127 100.0
TAR375G0210 Trochodendron aralioides HOM05D007045 ORTHO05D008872 6.2e-35 151.0 128 64.8
EL10Ac3g05081 Beta vulgaris HOM05D007045 ORTHO05D008872 2.6e-33 145.6 129 71.3
QL09p024203 Quercus lobata HOM05D007045 ORTHO05D008872 5.8e-33 144.4 127 66.1
QL09p024468 Quercus lobata HOM05D007045 ORTHO05D008872 5.8e-33 144.4 127 66.1
Actinidia34304 Actinidia chinensis HOM05D007045 ORTHO05D008872 1.1e-31 140.2 128 63.3
Nn1g01937 Nelumbo nucifera HOM05D007045 ORTHO05D008872 1.4e-31 139.8 128 60.9
Cfa015871 Carpinus fangiana HOM05D007045 ORTHO05D008872 2.4e-31 139.0 125 63.2
Actinidia08743 Actinidia chinensis HOM05D007045 ORTHO05D008872 3.2e-31 138.7 128 62.5
AUR62028173 Chenopodium quinoa HOM05D007045 ORTHO05D008872 4.2e-31 138.3 127 66.9
Sc15g0002300 Simmondsia chinensis HOM05D007045 ORTHO05D008872 5.5e-31 137.9 98 74.5
AUR62002059 Chenopodium quinoa HOM05D007045 ORTHO05D008872 4.6e-30 134.8 127 60.6
CSS0008098 Camellia sinensis var. sinensis HOM05D007045 ORTHO05D008872 6.0e-30 134.4 128 65.6
Eucgr.K00089 Eucalyptus grandis HOM05D007045 ORTHO05D008872 6.0e-30 134.4 131 59.5
Dinv29160 Davidia involucrata HOM05D007045 ORTHO05D008872 1.0e-29 133.7 98 72.4
CiPaw.05G239000 Carya illinoinensis HOM05D007045 ORTHO05D008872 8.7e-29 130.6 128 60.2
Duzib168G0464 Durio zibethinus HOM05D007045 ORTHO05D008872 8.7e-29 130.6 135 60.7
Ah.04g156750 Amaranthus hybridus HOM05D007045 ORTHO05D008872 1.1e-28 130.2 97 70.1
Manes.08G162500 Manihot esculenta HOM05D007045 ORTHO05D008872 1.1e-28 130.2 130 60.8
GSVIVG01024412001 Vitis vinifera HOM05D007045 ORTHO05D008872 1.1e-28 130.2 130 58.5
MSTRG.26931 Avicennia marina HOM05D007045 ORTHO05D008872 3.3e-28 128.6 127 59.8
TPR.G25217 Trifolium pratense HOM05D007045 ORTHO05D008872 3.3e-28 128.6 128 59.4
Glyma.05G000800 Glycine max HOM05D007045 ORTHO05D008872 5.6e-28 127.9 128 60.2
Gohir.A09G104600 Gossypium hirsutum HOM05D007045 ORTHO05D008872 7.4e-28 127.5 136 57.4
Gohir.D09G101300 Gossypium hirsutum HOM05D007045 ORTHO05D008872 1.3e-27 126.7 136 56.6
Phvul.004G000900 Phaseolus vulgaris HOM05D007045 ORTHO05D008872 2.8e-27 125.6 128 62.5
VMungo0464G1228 Vigna mungo HOM05D007045 ORTHO05D008872 2.8e-27 125.6 128 58.6
Thecc.09G264800 Theobroma cacao HOM05D007045 ORTHO05D008872 4.8e-27 124.8 135 58.5
COL.COLO4_25316 Corchorus olitorius HOM05D007045 ORTHO05D008872 1.1e-26 123.6 129 60.5
arahy.Tifrunner.gnm1.ann1.X2XK4P Arachis hypogaea HOM05D007045 ORTHO05D008872 3.1e-26 122.1 101 66.3
Medtr6g004010 Medicago truncatula HOM05D007045 ORTHO05D008872 4.0e-26 121.7 129 56.6
SalBow4G0316 Salvia bowleyana HOM05D007045 ORTHO05D008872 5.3e-26 121.3 128 54.7
SGA_v2.0_scaffold44G16886 Striga asiatica HOM05D007045 ORTHO05D008872 5.3e-26 121.3 131 54.2
Lsat_1_v5_gn_9_47440 Lactuca sativa HOM05D007045 ORTHO05D008872 6.9e-26 120.9 127 55.1
Prupe.2G325600 Prunus persica HOM05D007045 ORTHO05D008872 6.9e-26 120.9 126 56.3
Ca_04126_v3 Cicer arietinum L. HOM05D007045 ORTHO05D008872 9.0e-26 120.6 130 56.9
Ciclev10022834m.g Citrus clementina HOM05D007045 ORTHO05D008872 9.0e-26 120.6 134 56.0
FvH4_7g33930 Fragaria vesca HOM05D007045 ORTHO05D008872 9.0e-26 120.6 130 55.4
FAN01G0253 Fragaria x ananassa HOM05D007045 ORTHO05D008872 9.0e-26 120.6 130 55.4
Potri.019G049300 Populus trichocarpa HOM05D007045 ORTHO05D008872 9.0e-26 120.6 99 67.7
arahy.Tifrunner.gnm1.ann1.X6PR1P Arachis hypogaea HOM05D007045 ORTHO05D008872 1.5e-25 119.8 101 66.3
A06p05570 Brassica napus HOM05D007045 ORTHO05D008872 2.0e-25 119.4 128 53.9
BraA06t23765Z Brassica rapa HOM05D007045 ORTHO05D008872 2.0e-25 119.4 128 53.9
FAN03G1405 Fragaria x ananassa HOM05D007045 ORTHO05D008872 2.0e-25 119.4 130 56.9
Glyma.19G000800 Glycine max HOM05D007045 ORTHO05D008872 2.0e-25 119.4 99 66.7
PGSC0003DMG400000566 Solanum tuberosum HOM05D007045 ORTHO05D008872 2.0e-25 119.4 131 63.4
TWI34G0185 Tripterygium wilfordii HOM05D007045 ORTHO05D008872 2.0e-25 119.4 129 55.8
Sabra19G0058900 Salix brachista HOM05D007045 ORTHO05D008872 2.6e-25 119.0 99 70.7
Thhalv10009120m.g Eutrema salsugineum HOM05D007045 ORTHO05D008872 4.5e-25 118.2 130 55.4
Lj2g0018633 Lotus japonicus HOM05D007045 ORTHO05D008872 4.5e-25 118.2 131 56.5
Oeu041498.1 Olea europaea HOM05D007045 ORTHO05D008872 4.5e-25 118.2 98 65.3
AT1G08580 Arabidopsis thaliana HOM05D007045 ORTHO05D008872 7.6e-25 117.5 130 53.8
Atru.chr12.1972 Acer truncatum HOM05D007045 ORTHO05D008872 1.0e-24 117.1 98 66.3
ECA232G1212 Erigeron canadensis HOM05D007045 ORTHO05D008872 1.0e-24 117.1 131 52.7
Sopen03g027710 Solanum pennellii HOM05D007045 ORTHO05D008872 1.0e-24 117.1 131 55.7
Solyc03g096960.3 Solanum lycopersicum HOM05D007045 ORTHO05D008872 1.7e-24 116.3 131 56.5
Gorai.006G118700 Gossypium raimondii HOM05D007045 ORTHO05D008872 2.9e-24 115.5 106 63.2
RcHm_v2.0_Chr1g0384121 Rosa chinensis HOM05D007045 ORTHO05D008872 2.9e-24 115.5 130 56.9
THA.LOC104805790 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 2.9e-24 115.5 132 56.8
HanXRQChr05g0141731 Helianthus annuus HOM05D007045 ORTHO05D008872 3.8e-24 115.2 98 62.2
THA.LOC104821194 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 3.8e-24 115.2 103 63.1
PSO063G7366 Papaver somniferum HOM05D007045 ORTHO05D008872 4.9e-24 114.8 133 52.6
Psat1g052360 Pisum sativum HOM05D007045 ORTHO05D008872 4.9e-24 114.8 130 53.1
BcaB07g34101 Brassica carinata HOM05D007045 ORTHO05D008872 6.5e-24 114.4 129 51.2
C05p06680 Brassica napus HOM05D007045 ORTHO05D008872 6.5e-24 114.4 129 51.2
BolC5t29428H Brassica oleracea HOM05D007045 ORTHO05D008872 6.5e-24 114.4 129 51.2
Nitab4.5_0011930g0010 Nicotiana tabacum HOM05D007045 ORTHO05D008872 1.1e-23 113.6 102 64.7
Sp1g07240 Schrenkiella parvula HOM05D007045 ORTHO05D008872 1.1e-23 113.6 130 53.1
unitig_92.g28229 Utricularia gibba HOM05D007045 ORTHO05D008872 1.1e-23 113.6 127 51.2
AL1G19010 Arabidopsis lyrata HOM05D007045 ORTHO05D008872 1.4e-23 113.2 128 54.7
Hma1.2p1_1680F.1_g297210 Hydrangea macrophylla HOM05D007045 ORTHO05D008872 2.5e-23 112.5 152 48.0
HPP92_009021 Vanilla planifolia HOM05D007045 ORTHO05D008872 2.5e-23 112.5 127 52.8
CAN.G303.80 Capsicum annuum HOM05D007045 ORTHO05D008872 3.2e-23 112.1 98 63.3
PSO782G4413 Papaver somniferum HOM05D007045 ORTHO05D008872 3.2e-23 112.1 133 49.6
DCAR_020406 Daucus carota HOM05D007045 ORTHO05D008872 4.2e-23 111.7 98 64.3
CANSAT56G0844 Cannabis sativa HOM05D007045 ORTHO05D008872 1.2e-22 110.2 85 69.4
CANSAT56G3248 Cannabis sativa HOM05D007045 ORTHO05D008872 1.2e-22 110.2 85 69.4
vmacro10189 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 1.2e-22 110.2 77 75.3
vmacro23523 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 1.2e-22 110.2 77 75.3
CDE03G0192 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 1.6e-22 109.8 130 52.3
FAN10G3708 Fragaria x ananassa HOM05D007045 ORTHO05D008872 2.1e-22 109.4 99 61.6
MD07G1308400 Malus domestica HOM05D007045 ORTHO05D008872 2.7e-22 109.0 103 61.2
PGR142G4292 Punica granatum HOM05D007045 ORTHO05D008872 4.6e-22 108.2 137 54.0
Nitab4.5_0000021g0510 Nicotiana tabacum HOM05D007045 ORTHO05D008872 6.0e-22 107.8 120 53.3
Sed0010546 Sechium edule HOM05D007045 ORTHO05D008872 6.0e-22 107.8 127 51.2
Migut.F00099 Erythranthe guttata HOM05D007045 ORTHO05D008872 7.9e-22 107.5 126 54.8
SalBow4G2109 Salvia bowleyana HOM05D007045 ORTHO05D008872 7.9e-22 107.5 86 65.1
BraA09t41928Z Brassica rapa HOM05D007045 ORTHO05D008872 1.8e-21 106.3 128 49.2
A09p65840 Brassica napus HOM05D007045 ORTHO05D008872 3.0e-21 105.5 128 48.4
BcaC07g41937 Brassica carinata HOM05D007045 ORTHO05D008872 3.9e-21 105.1 130 49.2
C08p49930 Brassica napus HOM05D007045 ORTHO05D008872 6.7e-21 104.4 128 48.4
BolC8t52521H Brassica oleracea HOM05D007045 ORTHO05D008872 6.7e-21 104.4 128 48.4
Aqoxy3G02091 Aquilegia oxysepala HOM05D007045 ORTHO05D008872 8.7e-21 104.0 131 48.9
MD01G1235600 Malus domestica HOM05D007045 ORTHO05D008872 1.1e-20 103.6 76 69.7
Peaxi162Scf00745g00819 Petunia axillaris HOM05D007045 ORTHO05D008872 1.5e-20 103.2 76 69.7
Aa31sc20G150 Aethionema arabicum HOM05D007045 ORTHO05D008872 1.9e-20 102.8 132 50.8
CARHR008480 Cardamine hirsuta HOM05D007045 ORTHO05D008872 6.3e-19 97.8 75 65.3
CDE06G1066 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 6.3e-19 97.8 86 58.1
Cc02_g00300 Coffea canephora HOM05D007045 ORTHO05D008872 6.3e-19 97.8 142 50.0
Potri.013G091200 Populus trichocarpa HOM05D007045 ORTHO05D008872 8.2e-19 97.4 81 65.4
ATR0829G056 Amborella trichopoda HOM05D007045 ORTHO05D008872 4.1e-18 95.1 134 48.5
CsaV3_3G015710 Cucumis sativus L. HOM05D007045 ORTHO05D008872 4.1e-18 95.1 97 54.6
MELO3C006770.2 Cucumis melo HOM05D007045 ORTHO05D008872 5.3e-18 94.7 97 54.6
Os02g0604100 Oryza sativa ssp. japonica HOM05D007045 ORTHO05D008872 5.9e-17 91.3 131 45.8
Carub.0001s0794 Capsella rubella HOM05D007045 ORTHO05D008872 3.6e-14 82.0 70 60.0
ClCG05G007020 Citrullus lanatus HOM05D007045 ORTHO05D008872 1.0e-13 80.5 97 48.5
Zm00001eb246550 Zea mays HOM05D007045 ORTHO05D008872 8.8e-13 77.4 131 41.2
MELO3C032558.2 Cucumis melo HOM05D007045 ORTHO05D008872 7.4e-12 74.3 77 55.8
Mapoly0084s0018 Marchantia polymorpha HOM05D007045 ORTHO05D008872 3.8e-08 62.0 123 37.4
Pp3c13_5290 Physcomitrium patens HOM05D007045 ORTHO05D008872 9.4e-07 57.4 142 34.5
SMO115G0015 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 2.1e-06 56.2 103 40.8
Pp3c4_15620 Physcomitrium patens HOM05D007045 ORTHO05D008872 2.7e-06 55.8 67 49.3


User provided reference genes

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